© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|10203 |
| Gene name | |
| Location | Contig_800:9278..11748 |
| Strand | + |
| Gene length (bp) | 2470 |
| Transcript length (bp) | 2319 |
| Coding sequence length (bp) | 2319 |
| Protein length (aa) | 773 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF09359 | VTC | VTC domain | 3.9E-98 | 205 | 478 |
| PF02656 | DUF202 | Domain of unknown function (DUF202) | 1.4E-11 | 667 | 731 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P47075|VTC4_YEAST | Vacuolar transporter chaperone 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VTC4 PE=1 SV=2 | 1 | 762 | 0.0E+00 |
| sp|P78810|VTC4_SCHPO | Vacuolar transporter chaperone 4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vtc4 PE=1 SV=2 | 1 | 761 | 0.0E+00 |
| sp|O13718|VTC2_SCHPO | Vacuolar transporter chaperone 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vtc2 PE=1 SV=1 | 1 | 764 | 2.0E-97 |
| sp|Q02725|VTC3_YEAST | Vacuolar transporter chaperone 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VTC3 PE=1 SV=1 | 1 | 498 | 2.0E-68 |
| sp|P43585|VTC2_YEAST | Vacuolar transporter chaperone 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VTC2 PE=1 SV=1 | 1 | 498 | 2.0E-67 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P47075|VTC4_YEAST | Vacuolar transporter chaperone 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VTC4 PE=1 SV=2 | 1 | 762 | 0.0E+00 |
| sp|P78810|VTC4_SCHPO | Vacuolar transporter chaperone 4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vtc4 PE=1 SV=2 | 1 | 761 | 0.0E+00 |
| sp|O13718|VTC2_SCHPO | Vacuolar transporter chaperone 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vtc2 PE=1 SV=1 | 1 | 764 | 2.0E-97 |
| sp|Q02725|VTC3_YEAST | Vacuolar transporter chaperone 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VTC3 PE=1 SV=1 | 1 | 498 | 2.0E-68 |
| sp|P43585|VTC2_YEAST | Vacuolar transporter chaperone 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VTC2 PE=1 SV=1 | 1 | 498 | 2.0E-67 |
| sp|Q9UR17|VTC1_SCHPO | Vacuolar transporter chaperone 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=nrf1 PE=2 SV=1 | 647 | 764 | 1.0E-27 |
| sp|P40046|VTC1_YEAST | Vacuolar transporter chaperone 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VTC1 PE=1 SV=3 | 655 | 762 | 3.0E-22 |
| sp|Q5PP62|SPX3_ARATH | SPX domain-containing protein 3 OS=Arabidopsis thaliana GN=SPX3 PE=2 SV=1 | 1 | 205 | 7.0E-08 |
| sp|Q7Y0F6|SPX5_ORYSJ | SPX domain-containing protein 5 OS=Oryza sativa subsp. japonica GN=SPX5 PE=2 SV=1 | 1 | 176 | 6.0E-07 |
| sp|A2XHU0|SPX5_ORYSI | SPX domain-containing protein 5 OS=Oryza sativa subsp. indica GN=SPX5 PE=3 SV=1 | 1 | 176 | 6.0E-07 |
| sp|O59712|YBH4_SCHPO | Uncharacterized transporter C3B8.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC3B8.04c PE=3 SV=1 | 99 | 165 | 7.0E-07 |
| sp|Q8LBH4|SPX1_ARATH | SPX domain-containing protein 1 OS=Arabidopsis thaliana GN=SPX1 PE=2 SV=2 | 1 | 178 | 1.0E-06 |
| sp|Q6Z784|SPX2_ORYSJ | SPX domain-containing protein 2 OS=Oryza sativa subsp. japonica GN=SPX2 PE=2 SV=1 | 1 | 176 | 2.0E-06 |
| sp|A2X254|SPX2_ORYSI | SPX domain-containing protein 2 OS=Oryza sativa subsp. indica GN=SPX2 PE=3 SV=1 | 1 | 176 | 2.0E-06 |
| sp|Q7XEY9|SPX3_ORYSJ | SPX domain-containing protein 3 OS=Oryza sativa subsp. japonica GN=SPX3 PE=2 SV=1 | 1 | 176 | 2.0E-06 |
| sp|A2Z6W1|SPX3_ORYSI | SPX domain-containing protein 3 OS=Oryza sativa subsp. indica GN=SPX3 PE=3 SV=1 | 1 | 176 | 2.0E-06 |
| sp|Q94A21|SPX4_ARATH | SPX domain-containing protein 4 OS=Arabidopsis thaliana GN=SPX4 PE=2 SV=1 | 27 | 166 | 5.0E-06 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 62 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 676 | 698 | 22 |
| 2 | 705 | 727 | 22 |
| 3 | 745 | 764 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|10203 MKFGEQLRSSVIREYQWYYIDYNGLKADLKKATGPLKAGGILGREWTEEDETRFVGKLEDELEKVHTKQQVKAME ISRRIAVSEREVREVVNRLNERGLAEDGPSEEEFQLLEEDLSDIIADVHDLAKFVQLNYTGFYKIIKKHDKMTGW HLRPAFDTRLKAKPFYKENYDASVIKLSTLYDLVRTRGNPVKGDSAAGGSQASFVRQTTKYWVHPDNVTELKLII LKHLPVLVFNASKEFEQQDSAITSIYYDNPDTWDLYEGRLKKTEGAEAIRLRWYGGMQNETIFVERKTHREDWTG EKSVKARFSIKEKNVNAYLRGELLPPAIFEKARKEGKKSEKAIAEDERLASEIQYSVLKKGYRPVCRSFYNRTAF QLPADARVRISLDTELSMIREDNLDGRLRSGDNWRRMDIGIDYPFSQLPPDDIVRFPYAVLEVKLQTQLGQEPPA WVRQLISSHLVEAVPKFSKFIHGTACLFPDRIGLLPFWMPQMDVDIRKPVAHDFGIHRPGISGGTTTTSEDEEDL DSDDEDERPGRPSPSNGQSAGHAQGLPGAAADAEDQTAASAAPNEDYPIYDSDEEYDENYELEEARRIGGWHYYS TLISAKARALGRGALGVAKFLAPAPRSTQIPASQRQHALFGPGAVQQKKFKAPKGKKIYVPVRVEPKVYLAAERT FLGWLEFSIYIGAIAVTLLNFGTRTTSPSFWTAGIFTLLAVLSLCYSVAIYLYRSRSIRRRKAARYYDKWGPSGL CAALFVAVALNFAFEGRRRGIW* |
| Coding | >Hirsu2|10203 ATGAAGTTTGGCGAGCAGCTCCGGTCGAGCGTGATTCGCGAGTACCAATGGTACTACATTGACTACAACGGCCTC AAGGCCGACCTCAAGAAGGCCACCGGCCCGCTCAAAGCCGGCGGCATTCTCGGCCGGGAATGGACCGAGGAGGAC GAGACGCGCTTCGTGGGCAAGCTCGAGGACGAGCTGGAAAAGGTGCACACCAAGCAGCAGGTCAAGGCCATGGAG ATCTCGAGGCGCATCGCCGTCAGCGAGCGCGAGGTCAGGGAGGTCGTCAACCGGCTCAACGAGCGCGGCCTGGCC GAGGACGGGCCCAGCGAGGAGGAGTTCCAGCTGCTGGAGGAGGACCTCAGCGACATCATCGCCGACGTCCACGAC CTGGCCAAGTTCGTCCAGCTCAACTACACCGGCTTCTACAAGATCATCAAGAAACACGATAAAATGACGGGCTGG CACCTCCGCCCGGCCTTCGACACCCGCCTCAAGGCCAAGCCCTTCTACAAGGAGAACTACGACGCGTCCGTCATC AAGCTGTCGACGCTCTACGACCTCGTCCGCACCCGCGGCAACCCGGTCAAGGGCGACAGCGCCGCCGGCGGCTCC CAGGCCAGCTTCGTCCGGCAGACGACCAAGTACTGGGTCCACCCGGACAACGTGACGGAGCTGAAGCTCATCATC CTCAAGCACCTGCCCGTCCTCGTCTTCAACGCGAGCAAGGAGTTCGAGCAGCAGGACTCGGCCATCACCTCCATC TACTACGACAACCCCGACACCTGGGACCTGTACGAGGGCCGGCTGAAGAAGACGGAGGGCGCCGAGGCCATCCGC CTCCGCTGGTACGGCGGCATGCAGAACGAGACCATCTTCGTCGAGCGCAAGACGCACCGCGAGGACTGGACCGGC GAGAAGTCGGTCAAGGCCCGCTTCTCCATCAAGGAGAAGAACGTCAACGCCTACCTGAGGGGCGAGCTGCTGCCG CCCGCCATCTTCGAGAAGGCGCGCAAGGAGGGCAAGAAGTCGGAAAAGGCCATCGCCGAGGACGAGAGGCTGGCG TCCGAGATCCAGTACTCGGTCCTCAAGAAGGGCTACCGGCCCGTCTGCCGCTCCTTCTACAACCGGACCGCCTTT CAGCTGCCGGCCGACGCCCGCGTCCGCATCTCCCTCGACACCGAGCTGTCCATGATCCGCGAGGACAACCTCGAC GGCCGCCTCCGGTCCGGCGACAACTGGCGCCGCATGGACATCGGCATCGACTACCCCTTTTCGCAGCTGCCGCCC GACGACATCGTGCGCTTCCCCTACGCCGTCCTCGAGGTCAAGCTGCAGACGCAGCTGGGACAGGAGCCCCCGGCC TGGGTCCGCCAGCTCATCTCGTCGCACCTGGTCGAGGCCGTGCCCAAGTTCTCCAAGTTCATCCACGGCACGGCC TGCCTGTTCCCCGACCGCATCGGCCTGCTGCCCTTCTGGATGCCGCAGATGGACGTCGACATCCGGAAGCCCGTC GCCCACGACTTCGGCATCCACCGGCCCGGCATCTCGGGCGGGACGACGACGACGTCGGAGGACGAGGAGGACCTG GACTCGGACGACGAAGACGAGCGGCCGGGCCGCCCGAGCCCCTCCAACGGCCAGTCCGCCGGTCACGCCCAGGGG CTGCCCGGCGCGGCCGCCGACGCCGAGGACCAGACGGCCGCGTCCGCCGCGCCCAACGAGGATTACCCCATCTAC GACTCGGACGAGGAATACGACGAGAACTACGAGCTGGAGGAGGCCAGGAGGATCGGCGGCTGGCACTACTACTCG ACGCTCATCTCGGCCAAGGCCCGCGCCTTGGGCCGCGGCGCCCTCGGCGTGGCCAAGTTCCTGGCGCCGGCGCCT CGCAGCACGCAGATCCCGGCCAGCCAGCGGCAGCACGCCCTGTTCGGCCCCGGCGCCGTCCAGCAGAAGAAGTTC AAGGCGCCCAAGGGCAAGAAGATCTACGTGCCGGTCCGCGTCGAGCCCAAGGTCTACCTGGCCGCGGAGAGGACC TTTTTGGGTTGGCTCGAGTTCTCCATCTACATCGGGGCCATCGCCGTCACGCTGCTCAACTTCGGGACCAGGACG ACGTCGCCGTCGTTCTGGACGGCCGGCATCTTCACGCTGCTCGCCGTGCTCAGCCTGTGCTACTCGGTCGCCATC TACCTGTACCGCAGCCGGTCGATCCGGCGCCGCAAGGCGGCGCGCTACTACGACAAGTGGGGGCCCAGCGGCCTC TGCGCCGCCCTCTTCGTCGCCGTCGCCCTCAACTTTGCCTTTGAGGGCCGCCGACGGGGCATCTGGTGA |
| Transcript | >Hirsu2|10203 ATGAAGTTTGGCGAGCAGCTCCGGTCGAGCGTGATTCGCGAGTACCAATGGTACTACATTGACTACAACGGCCTC AAGGCCGACCTCAAGAAGGCCACCGGCCCGCTCAAAGCCGGCGGCATTCTCGGCCGGGAATGGACCGAGGAGGAC GAGACGCGCTTCGTGGGCAAGCTCGAGGACGAGCTGGAAAAGGTGCACACCAAGCAGCAGGTCAAGGCCATGGAG ATCTCGAGGCGCATCGCCGTCAGCGAGCGCGAGGTCAGGGAGGTCGTCAACCGGCTCAACGAGCGCGGCCTGGCC GAGGACGGGCCCAGCGAGGAGGAGTTCCAGCTGCTGGAGGAGGACCTCAGCGACATCATCGCCGACGTCCACGAC CTGGCCAAGTTCGTCCAGCTCAACTACACCGGCTTCTACAAGATCATCAAGAAACACGATAAAATGACGGGCTGG CACCTCCGCCCGGCCTTCGACACCCGCCTCAAGGCCAAGCCCTTCTACAAGGAGAACTACGACGCGTCCGTCATC AAGCTGTCGACGCTCTACGACCTCGTCCGCACCCGCGGCAACCCGGTCAAGGGCGACAGCGCCGCCGGCGGCTCC CAGGCCAGCTTCGTCCGGCAGACGACCAAGTACTGGGTCCACCCGGACAACGTGACGGAGCTGAAGCTCATCATC CTCAAGCACCTGCCCGTCCTCGTCTTCAACGCGAGCAAGGAGTTCGAGCAGCAGGACTCGGCCATCACCTCCATC TACTACGACAACCCCGACACCTGGGACCTGTACGAGGGCCGGCTGAAGAAGACGGAGGGCGCCGAGGCCATCCGC CTCCGCTGGTACGGCGGCATGCAGAACGAGACCATCTTCGTCGAGCGCAAGACGCACCGCGAGGACTGGACCGGC GAGAAGTCGGTCAAGGCCCGCTTCTCCATCAAGGAGAAGAACGTCAACGCCTACCTGAGGGGCGAGCTGCTGCCG CCCGCCATCTTCGAGAAGGCGCGCAAGGAGGGCAAGAAGTCGGAAAAGGCCATCGCCGAGGACGAGAGGCTGGCG TCCGAGATCCAGTACTCGGTCCTCAAGAAGGGCTACCGGCCCGTCTGCCGCTCCTTCTACAACCGGACCGCCTTT CAGCTGCCGGCCGACGCCCGCGTCCGCATCTCCCTCGACACCGAGCTGTCCATGATCCGCGAGGACAACCTCGAC GGCCGCCTCCGGTCCGGCGACAACTGGCGCCGCATGGACATCGGCATCGACTACCCCTTTTCGCAGCTGCCGCCC GACGACATCGTGCGCTTCCCCTACGCCGTCCTCGAGGTCAAGCTGCAGACGCAGCTGGGACAGGAGCCCCCGGCC TGGGTCCGCCAGCTCATCTCGTCGCACCTGGTCGAGGCCGTGCCCAAGTTCTCCAAGTTCATCCACGGCACGGCC TGCCTGTTCCCCGACCGCATCGGCCTGCTGCCCTTCTGGATGCCGCAGATGGACGTCGACATCCGGAAGCCCGTC GCCCACGACTTCGGCATCCACCGGCCCGGCATCTCGGGCGGGACGACGACGACGTCGGAGGACGAGGAGGACCTG GACTCGGACGACGAAGACGAGCGGCCGGGCCGCCCGAGCCCCTCCAACGGCCAGTCCGCCGGTCACGCCCAGGGG CTGCCCGGCGCGGCCGCCGACGCCGAGGACCAGACGGCCGCGTCCGCCGCGCCCAACGAGGATTACCCCATCTAC GACTCGGACGAGGAATACGACGAGAACTACGAGCTGGAGGAGGCCAGGAGGATCGGCGGCTGGCACTACTACTCG ACGCTCATCTCGGCCAAGGCCCGCGCCTTGGGCCGCGGCGCCCTCGGCGTGGCCAAGTTCCTGGCGCCGGCGCCT CGCAGCACGCAGATCCCGGCCAGCCAGCGGCAGCACGCCCTGTTCGGCCCCGGCGCCGTCCAGCAGAAGAAGTTC AAGGCGCCCAAGGGCAAGAAGATCTACGTGCCGGTCCGCGTCGAGCCCAAGGTCTACCTGGCCGCGGAGAGGACC TTTTTGGGTTGGCTCGAGTTCTCCATCTACATCGGGGCCATCGCCGTCACGCTGCTCAACTTCGGGACCAGGACG ACGTCGCCGTCGTTCTGGACGGCCGGCATCTTCACGCTGCTCGCCGTGCTCAGCCTGTGCTACTCGGTCGCCATC TACCTGTACCGCAGCCGGTCGATCCGGCGCCGCAAGGCGGCGCGCTACTACGACAAGTGGGGGCCCAGCGGCCTC TGCGCCGCCCTCTTCGTCGCCGTCGCCCTCAACTTTGCCTTTGAGGGCCGCCGACGGGGCATCTGGTGA |
| Gene | >Hirsu2|10203 ATGAAGTTTGGCGAGCAGCTCCGGTCGAGCGTGATTCGCGAGTACCAATGGTACTACATTGACTACAACGGCCTC AAGGCCGACCTCAAGAAGGCCACCGGCCCGCTCAAAGCCGGCGGCATTCTCGGCCGGGAATGGACCGAGGAGGAC GAGACGCGCTTCGTGGGCAAGCTCGAGGACGAGCTGGAAAAGGTGCACACCAAGCAGCAGGTCAAGGCCATGGAG ATCTCGAGGCGCATCGCCGTCAGCGAGCGCGAGGTCAGGGAGGTCGTCAACCGGCTCAACGAGCGCGGCCTGGCC GAGGACGGGCCCAGCGAGGAGGAGTTCCAGCTGCTGGAGGAGGACCTCAGCGACATCATCGCCGACGTCCACGAC CTGGCCAAGTTCGTCCAGCTCAACTACACCGGCTTCTACAAGATCATCAAGAAACACGATGTGAGTGGCGACGAC GCCGCGCCGGCACCGACACTGACAAGCACGCGGCGTAGAAAATGACGGGCTGGCACCTCCGCCCGGCCTTCGACA CCCGCCTCAAGGCCAAGCCCTTCTACAAGGAGAACTACGACGCGTCCGTCATCAAGCTGTCGACGCTCTACGACC TCGTCCGCACCCGCGGCAACCCGGTCAAGGGCGACAGCGCCGCCGGCGGCTCCCAGGCCAGCTTCGTCCGGCAGA CGACCAAGTACTGGGTCCACCCGGACAACGTGACGGAGCTGAAGCTCATCATCCTCAAGCACCTGCCCGTCCTCG TCTTCAACGCGAGCAAGGAGTTCGAGCAGCAGGACTCGGCCATCACCTCCATCTACTACGACAACCCCGACACCT GGGACCTGTACGAGGGCCGGCTGAAGAAGACGGAGGGCGCCGAGGCCATCCGCCTCCGCTGGTACGGCGGCATGC AGAACGAGACCATCTTCGTCGAGCGCAAGACGCACCGCGAGGACTGGACCGGCGAGAAGTCGGTCAAGGCCCGCT TCTCCATCAAGGAGAAGAACGTCAACGCCTACCTGAGGGGCGAGCTGCTGCCGCCCGCCATCTTCGAGAAGGCGC GCAAGGAGGGCAAGAAGTCGGAAAAGGCCATCGCCGAGGACGAGAGGCTGGCGTCCGAGATCCAGTACTCGGTCC TCAAGAAGGGCTACCGGCCCGTCTGCCGCTCCTTCTACAACCGGACCGCCTTTCAGCTGCCGGCCGACGCCCGCG TCCGCATCTCCCTCGACACCGAGCTGTCCATGATCCGCGAGGACAACCTCGACGGCCGCCTCCGGTCCGGCGACA ACTGGCGCCGCATGGACATCGGCATCGACTACCCCTTTTCGCAGCTGCCGCCCGACGACATCGTGCGCTTCCCCT ACGCCGTCCTCGAGGTCAAGCTGCAGACGCAGCTGGGACAGGAGCCCCCGGCCTGGGTCCGCCAGCTCATCTCGT CGCACCTGGTCGAGGCCGTGCCCAAGTTCTCCAAGTTCATCCACGGCACGGCCTGCCTGTTCCCCGACCGCATCG GCCTGCTGCCCTTCTGGATGCCGCAGATGGACGTCGACATCCGGAAGCCCGTCGCCCACGACTTCGGCATCCACC GGCCCGGCATCTCGGGCGGGACGACGACGACGTCGGAGGACGAGGAGGACCTGGACTCGGACGACGAAGACGAGC GGCCGGGCCGCCCGAGCCCCTCCAACGGCCAGTCCGCCGGTCACGCCCAGGGGCTGCCCGGCGCGGCCGCCGACG CCGAGGACCAGACGGCCGCGTCCGCCGCGCCCAACGAGGATTACCCCATCTACGACTCGGACGAGGAATACGACG AGAACTACGAGCTGGAGGAGGCCAGGAGGATCGGCGGCTGGCACTACTACTCGACGCTCATCTCGGCCAAGGCCC GCGCCTTGGGCCGCGGCGCCCTCGGCGTGGCCAAGTTCCTGGCGCCGGCGCCTCGCAGCACGCAGATCCCGGCCA GCCAGCGGCAGCACGCCCTGTTCGGCCCCGGCGCCGTCCAGCAGAAGAAGTTCAAGGCGCCCAAGGGCAAGAAGA TCTACGTGCCGGTCCGCGTCGAGCCCAAGGTCTACCTGGCCGCGGAGAGGACCTTTTTGGGTTGGGTAAGTCCGG GGTCCCGTCCCTGTCGCAGCTCGAGAGAGAGAGAGAGAGAAAGGACGGAGACGGGCGGCTGACACGACATGTTTT GTCCCTGCCGCAGCTCGAGTTCTCCATCTACATCGGGGCCATCGCCGTCACGCTGCTCAACTTCGGGACCAGGAC GACGTCGCCGTCGTTCTGGACGGCCGGCATCTTCACGCTGCTCGCCGTGCTCAGCCTGTGCTACTCGGTCGCCAT CTACCTGTACCGCAGCCGGTCGATCCGGCGCCGCAAGGCGGCGCGCTACTACGACAAGTGGGGGCCCAGCGGCCT CTGCGCCGCCCTCTTCGTCGCCGTCGCCCTCAACTTTGCCTTTGAGGGCCGCCGACGGGGCATCTGGTGA |