Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|10198
Gene name
LocationContig_80:37987..39253
Strand+
Gene length (bp)1266
Transcript length (bp)1050
Coding sequence length (bp)1050
Protein length (aa) 350

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 22 0.5

Transmembrane Domains

Domain # Start End Length
1 23 45 22
2 58 80 22
3 102 124 22
4 136 158 22
5 180 202 22
6 215 237 22
7 252 274 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|10198
MSSQHEASAPTTHPSEMAHDYTVLLGVESAAILVAAVCVALRFYQQKRNWGAICRDDWACLGAMILCLGLLPTAV
VSATAGHGGYHTSTYTRDELSVFWKAIFATELLYSASVSMSKLSALFFYRRIFSVASANRLFVRIMYGVVAAFWL
SSTVGVIFSVTPVQALWEPWLPHTGISSRHFYVATGLINASLDLAILAFPQTRVWNIQTSRRNRVLLSLVFLMGG
FVCVTSVMRLIYMATYDEADLTRDLGNTFLWTVLEPTMSIICCCLPILYKLFKGQDSKDSSSGRGTSQGRIVART
DSSGKRSQSSSSHWVPTPPMGPAGPQDDAWINSLDPVHIHREFTMAEKR*
Coding >Hirsu2|10198
ATGTCGTCCCAACATGAAGCATCGGCGCCGACCACGCATCCGAGTGAGATGGCTCACGACTACACCGTCCTCCTC
GGGGTCGAGTCGGCGGCGATACTGGTCGCTGCCGTGTGTGTTGCCCTGCGCTTCTACCAGCAGAAACGGAACTGG
GGCGCCATCTGCCGTGATGACTGGGCCTGCCTCGGGGCCATGATACTATGCCTTGGCCTCCTGCCGACGGCCGTG
GTCAGCGCGACCGCCGGCCATGGTGGCTATCACACCTCAACATACACCAGGGACGAGCTGTCGGTGTTCTGGAAG
GCCATTTTCGCCACCGAGCTTCTGTACAGCGCAAGCGTCTCCATGTCCAAGCTCTCCGCCCTGTTCTTCTACCGC
CGCATCTTTTCCGTGGCGTCGGCCAACAGGCTGTTCGTGCGCATCATGTACGGTGTCGTGGCGGCCTTCTGGCTC
AGCTCGACCGTCGGCGTCATCTTCTCCGTCACTCCGGTCCAAGCCCTGTGGGAGCCCTGGCTGCCCCATACGGGC
ATCAGCTCCAGACACTTCTACGTCGCGACAGGGCTCATCAACGCGAGCCTCGACCTGGCCATCTTGGCCTTTCCG
CAGACCAGGGTCTGGAATATCCAGACGTCGAGGCGGAACCGGGTGCTCCTCTCGCTCGTCTTCCTGATGGGCGGC
TTTGTCTGCGTGACAAGCGTCATGCGTCTCATCTACATGGCCACCTACGACGAGGCCGATCTTACACGCGATCTT
GGCAACACTTTTCTTTGGACCGTGCTCGAACCAACCATGTCCATCATATGCTGCTGCCTCCCCATCTTGTACAAG
CTGTTCAAAGGCCAGGACTCGAAAGATTCAAGTTCTGGCCGGGGCACGAGCCAGGGCCGTATTGTTGCCCGGACA
GACTCTTCTGGGAAGCGCAGCCAATCGTCGAGCTCCCATTGGGTTCCGACACCGCCAATGGGTCCCGCAGGCCCC
CAGGACGACGCATGGATAAATTCTCTTGACCCGGTGCACATACATCGGGAGTTTACAATGGCGGAGAAGCGCTAG
Transcript >Hirsu2|10198
ATGTCGTCCCAACATGAAGCATCGGCGCCGACCACGCATCCGAGTGAGATGGCTCACGACTACACCGTCCTCCTC
GGGGTCGAGTCGGCGGCGATACTGGTCGCTGCCGTGTGTGTTGCCCTGCGCTTCTACCAGCAGAAACGGAACTGG
GGCGCCATCTGCCGTGATGACTGGGCCTGCCTCGGGGCCATGATACTATGCCTTGGCCTCCTGCCGACGGCCGTG
GTCAGCGCGACCGCCGGCCATGGTGGCTATCACACCTCAACATACACCAGGGACGAGCTGTCGGTGTTCTGGAAG
GCCATTTTCGCCACCGAGCTTCTGTACAGCGCAAGCGTCTCCATGTCCAAGCTCTCCGCCCTGTTCTTCTACCGC
CGCATCTTTTCCGTGGCGTCGGCCAACAGGCTGTTCGTGCGCATCATGTACGGTGTCGTGGCGGCCTTCTGGCTC
AGCTCGACCGTCGGCGTCATCTTCTCCGTCACTCCGGTCCAAGCCCTGTGGGAGCCCTGGCTGCCCCATACGGGC
ATCAGCTCCAGACACTTCTACGTCGCGACAGGGCTCATCAACGCGAGCCTCGACCTGGCCATCTTGGCCTTTCCG
CAGACCAGGGTCTGGAATATCCAGACGTCGAGGCGGAACCGGGTGCTCCTCTCGCTCGTCTTCCTGATGGGCGGC
TTTGTCTGCGTGACAAGCGTCATGCGTCTCATCTACATGGCCACCTACGACGAGGCCGATCTTACACGCGATCTT
GGCAACACTTTTCTTTGGACCGTGCTCGAACCAACCATGTCCATCATATGCTGCTGCCTCCCCATCTTGTACAAG
CTGTTCAAAGGCCAGGACTCGAAAGATTCAAGTTCTGGCCGGGGCACGAGCCAGGGCCGTATTGTTGCCCGGACA
GACTCTTCTGGGAAGCGCAGCCAATCGTCGAGCTCCCATTGGGTTCCGACACCGCCAATGGGTCCCGCAGGCCCC
CAGGACGACGCATGGATAAATTCTCTTGACCCGGTGCACATACATCGGGAGTTTACAATGGCGGAGAAGCGCTAG
Gene >Hirsu2|10198
ATGTCGTCCCAACATGAAGCATCGGCGCCGACCACGCATCCGAGTGAGATGGCTCACGACTACACCGTCCTCCTC
GGGGTCGAGTCGGCGGCGATACTGGTCGCTGCCGTGTGTGTTGCCCTGCGCTTCTACCAGCAGAAACGGAACTGG
GGCGCCATCTGCCGTGATGACTGGGCCTGCCTCGGGGCCATGATACTATGCCTTGGCCTCCTGCCGACGGCCGTG
GTCAGCGCGACCGCCGGCCATGGTGGCTATCACACCTCAACATACACCAGGGACGAGCTGTCGGTGTTCTGGAAG
GTAGGCACAGAAGCACGCCCCGTGGACGTGAACTCTTGCCAACATGAACCCGGCCGCCGGCTAACTTGAGCACAT
ATTCTTCCGCCGCCCAGGCCATTTTCGCCACCGAGCTTCTGTACAGCGCAAGCGTCTCCATGTCCAAGCTCTCCG
CCCTGTTCTTCTACCGCCGCATCTTTTCCGTGGCGTCGGCCAACAGGCTGTTCGTGCGCATCATGTACGGTGTCG
TGGCGGCCTTCTGGCTCAGCTCGACCGTCGGCGTCATCTTCTCCGTCACTCCGGTCCAAGCCCTGTGGGAGCCCT
GGCTGCCCCATACGGGCATCAGCTCCAGACACTTCTACGTCGCGACAGGGCTCATCAACGCGAGCCTCGACCTGG
CCATCTTGGCCTTTCCGCAGACCAGGGTCTGGAATATCCAGACGTCGAGGCGGAACCGGGTGCTCCTCTCGCTCG
TCTTCCTGATGGGCGGCTTGTGAGTGGTGCTCCTGGGGTCAACTCTCCCTGACATGCACTAACGCGTCTTGTCAG
TGTCTGCGTGACAAGCGTCATGCGTCTCATCTACATGGCCACCTACGACGAGGCCGATCTTACACGTACGTGCCA
ACCCTACACCCATCGACGCTCGAAACTCTGGATGCGGAGGCTGACATCAATCTGATAGGCGATCTTGGCAACACT
TTTCTTTGGACCGTGCTCGAACCAACCATGTCCATCATATGCTGCTGCCTCCCCATCTTGTACAAGCTGTTCAAA
GGCCAGGACTCGAAAGATTCAAGTTCTGGCCGGGGCACGAGCCAGGGCCGTATTGTTGCCCGGACAGACTCTTCT
GGGAAGCGCAGCCAATCGTCGAGCTCCCATTGGGTTCCGACACCGCCAATGGGTCCCGCAGGCCCCCAGGACGAC
GCATGGATAAATTCTCTTGACCCGGTGCACATACATCGGGAGTTTACAATGGCGGAGAAGCGCTAG

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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