Protein ID | Hirsu2|10183 |
Gene name | |
Location | Contig_8:80762..81947 |
Strand | - |
Gene length (bp) | 1185 |
Transcript length (bp) | 945 |
Coding sequence length (bp) | 945 |
Protein length (aa) | 315 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00096 | zf-C2H2 | Zinc finger, C2H2 type | 6.9E-03 | 42 | 65 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|O43670|ZN207_HUMAN | BUB3-interacting and GLEBS motif-containing protein ZNF207 OS=Homo sapiens GN=ZNF207 PE=1 SV=1 | 1 | 116 | 2.0E-29 |
sp|Q7ZXV8|ZN207_XENLA | BUB3-interacting and GLEBS motif-containing protein ZNF207 OS=Xenopus laevis GN=znf207 PE=1 SV=1 | 17 | 116 | 6.0E-29 |
sp|Q9JMD0|ZN207_MOUSE | BUB3-interacting and GLEBS motif-containing protein ZNF207 OS=Mus musculus GN=Znf207 PE=1 SV=1 | 1 | 116 | 1.0E-28 |
sp|Q9C5G0|SUF4_ARATH | Protein SUPPRESSOR OF FRI 4 OS=Arabidopsis thaliana GN=SUF4 PE=1 SV=1 | 1 | 100 | 1.0E-28 |
sp|Q5R8K4|ZN207_PONAB | BUB3-interacting and GLEBS motif-containing protein ZNF207 OS=Pongo abelii GN=ZNF207 PE=2 SV=1 | 1 | 116 | 3.0E-28 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Nucleus | Nuclear localization signal | 0.3167 | 0.9065 | 0.0512 | 0.034 | 0.0624 | 0.0014 | 0.0723 | 0.0211 | 0.0305 | 0.007 |
Transcription Factor Class (based on PFAM domains) |
---|
C2H2 zinc finger |
Orthofinder run ID | 4 |
Orthogroup | 4784 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|10183 MGKKRRGHPDVEDVLARPWCYYCERDFEDLKLLISHQKAKHFKCDRCGRRLNTAGGLSVHMNQVHKETLHQVENA LNNRQGLDVEIFGMEGIPHDILEQHRNRIIQNFYQAQEDRRIATGNPLPGQATHNPKKKIKMETKEELLVRVREW RAKKKAEREAVASGGDDGAAAANANVAPEQLSGQYQQPQQGFEQASYAGQAAHGQPPYGYHANSLPARPPGSVGA PPGLPQRLTEGTDRNVAAGAQAAATGDDIDKMIRMAEAGVKSTQKAEDGGDGEKKSKKGRLVYDDAEVSPEEKMA AMPRYAFHPDIAAA* |
Coding | >Hirsu2|10183 ATGGGGAAGAAGCGGCGCGGACACCCCGACGTCGAGGACGTCCTCGCTCGTCCGTGGTGCTACTACTGCGAGCGA GACTTTGAGGACTTGAAGCTCCTCATCTCTCATCAGAAAGCAAAGCACTTCAAGTGCGACAGATGCGGCAGACGT CTCAACACTGCAGGAGGTCTCTCCGTCCACATGAACCAAGTCCACAAAGAAACGCTCCACCAGGTCGAGAATGCG CTCAATAATCGCCAGGGCCTCGACGTGGAGATTTTCGGCATGGAAGGTATCCCGCACGACATTCTCGAACAACAT CGGAACCGCATCATCCAGAACTTCTACCAGGCGCAGGAGGACCGCCGAATCGCCACGGGAAACCCCCTCCCCGGC CAAGCCACCCACAACCCCAAGAAGAAGATCAAGATGGAGACGAAAGAGGAGCTGCTGGTGAGGGTCAGGGAATGG CGCGCCAAGAAGAAGGCCGAGAGAGAGGCGGTCGCTAGCGGAGGTGACGATGGTGCTGCCGCCGCGAACGCGAAC GTCGCCCCAGAACAACTCAGCGGCCAATACCAGCAGCCACAGCAAGGGTTCGAGCAAGCAAGCTACGCGGGCCAG GCTGCTCACGGCCAGCCTCCCTACGGATACCATGCCAACTCACTGCCGGCCCGGCCCCCCGGGAGCGTGGGAGCT CCTCCCGGCCTGCCGCAACGGCTGACTGAAGGAACCGACAGGAACGTCGCGGCTGGGGCGCAGGCCGCCGCGACG GGCGACGACATCGACAAGATGATTCGCATGGCCGAAGCGGGCGTCAAGTCGACGCAAAAGGCCGAGGACGGCGGG GACGGGGAGAAGAAGTCGAAGAAGGGCAGGCTGGTGTACGACGACGCGGAAGTCAGCCCGGAGGAGAAGATGGCG GCAATGCCGCGCTACGCATTCCACCCAGACATTGCGGCGGCCTGA |
Transcript | >Hirsu2|10183 ATGGGGAAGAAGCGGCGCGGACACCCCGACGTCGAGGACGTCCTCGCTCGTCCGTGGTGCTACTACTGCGAGCGA GACTTTGAGGACTTGAAGCTCCTCATCTCTCATCAGAAAGCAAAGCACTTCAAGTGCGACAGATGCGGCAGACGT CTCAACACTGCAGGAGGTCTCTCCGTCCACATGAACCAAGTCCACAAAGAAACGCTCCACCAGGTCGAGAATGCG CTCAATAATCGCCAGGGCCTCGACGTGGAGATTTTCGGCATGGAAGGTATCCCGCACGACATTCTCGAACAACAT CGGAACCGCATCATCCAGAACTTCTACCAGGCGCAGGAGGACCGCCGAATCGCCACGGGAAACCCCCTCCCCGGC CAAGCCACCCACAACCCCAAGAAGAAGATCAAGATGGAGACGAAAGAGGAGCTGCTGGTGAGGGTCAGGGAATGG CGCGCCAAGAAGAAGGCCGAGAGAGAGGCGGTCGCTAGCGGAGGTGACGATGGTGCTGCCGCCGCGAACGCGAAC GTCGCCCCAGAACAACTCAGCGGCCAATACCAGCAGCCACAGCAAGGGTTCGAGCAAGCAAGCTACGCGGGCCAG GCTGCTCACGGCCAGCCTCCCTACGGATACCATGCCAACTCACTGCCGGCCCGGCCCCCCGGGAGCGTGGGAGCT CCTCCCGGCCTGCCGCAACGGCTGACTGAAGGAACCGACAGGAACGTCGCGGCTGGGGCGCAGGCCGCCGCGACG GGCGACGACATCGACAAGATGATTCGCATGGCCGAAGCGGGCGTCAAGTCGACGCAAAAGGCCGAGGACGGCGGG GACGGGGAGAAGAAGTCGAAGAAGGGCAGGCTGGTGTACGACGACGCGGAAGTCAGCCCGGAGGAGAAGATGGCG GCAATGCCGCGCTACGCATTCCACCCAGACATTGCGGCGGCCTGA |
Gene | >Hirsu2|10183 ATGGGGAAGAAGCGGCGCGGACACCCCGACGTCGAGGACGTCCTCGCTCGTCCGTGGTGCTACTACTGTGCGGTG CCGCGTCCAGCCGAGACGTGAGAGGCTCGTAATACTGATATGGATCACCTCAGGCGAGCGAGACTTTGAGGACTT GAAGCTCCTCATCTCTCATCAGAAAGCAAAGCACTTCAAGTGCGACAGATGCGGCAGACGTCTCAACACTGCAGG AGGTACGGCACGCAGCGCAACTGCCAATCTGCCCGAGCGCGAAATGATCATGGAGAGTGAGAGATGGAGTAGCTG ATAGCCTCGGTGTGTGCACCCTTTAGGTCTCTCCGTCCACATGAACCAAGTCCACAAAGAAACGCTCCACCAGGT CGAGAATGCGCTCAATAATCGCCAGGGCCTCGACGTGGAGATTTTCGGCATGGAAGGTATCCCGCACGACATTCT CGAACAACATCGGAACCGCATCATCCAGAACTTCTACCAGGCGCAGGAGGACCGCCGAATCGCCACGGGAAACCC CCTCCCCGGCCAAGCCACCCACAACCCCAAGAAGAAGATCAAGATGGAGACGAAAGAGGAGCTGCTGGTGAGGGT CAGGGAATGGCGCGCCAAGAAGAAGGCCGAGAGAGAGGCGGTCGCTAGCGGAGGTGACGATGGTGCTGCCGCCGC GAACGCGAACGTCGCCCCAGAACAACTCGTAAGGCTCTCCCCACTCCTCTTCCTTGTACGAGAGACCACGAGCAT GTGCTTCCCGTCATTGCTAACTCCCCGATCCAGAGCGGCCAATACCAGCAGCCACAGCAAGGGTTCGAGCAAGCA AGCTACGCGGGCCAGGCTGCTCACGGCCAGCCTCCCTACGGATACCATGCCAACTCACTGCCGGCCCGGCCCCCC GGGAGCGTGGGAGCTCCTCCCGGCCTGCCGCAACGGCTGACTGAAGGAACCGACAGGAACGTCGCGGCTGGGGCG CAGGCCGCCGCGACGGGCGACGACATCGACAAGATGATTCGCATGGCCGAAGCGGGCGTCAAGTCGACGCAAAAG GCCGAGGACGGCGGGGACGGGGAGAAGAAGTCGAAGAAGGGCAGGCTGGTGTACGACGACGCGGAAGTCAGCCCG GAGGAGAAGATGGCGGCAATGCCGCGCTACGCATTCCACCCAGACATTGCGGCGGCCTGA |