© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|10183 |
| Gene name | |
| Location | Contig_8:80762..81947 |
| Strand | - |
| Gene length (bp) | 1185 |
| Transcript length (bp) | 945 |
| Coding sequence length (bp) | 945 |
| Protein length (aa) | 315 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00096 | zf-C2H2 | Zinc finger, C2H2 type | 6.3E-03 | 42 | 65 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O43670|ZN207_HUMAN | BUB3-interacting and GLEBS motif-containing protein ZNF207 OS=Homo sapiens GN=ZNF207 PE=1 SV=1 | 1 | 116 | 2.0E-29 |
| sp|Q7ZXV8|ZN207_XENLA | BUB3-interacting and GLEBS motif-containing protein ZNF207 OS=Xenopus laevis GN=znf207 PE=1 SV=1 | 17 | 116 | 6.0E-29 |
| sp|Q9JMD0|ZN207_MOUSE | BUB3-interacting and GLEBS motif-containing protein ZNF207 OS=Mus musculus GN=Znf207 PE=1 SV=1 | 1 | 116 | 1.0E-28 |
| sp|Q9C5G0|SUF4_ARATH | Protein SUPPRESSOR OF FRI 4 OS=Arabidopsis thaliana GN=SUF4 PE=1 SV=1 | 1 | 100 | 1.0E-28 |
| sp|Q5R8K4|ZN207_PONAB | BUB3-interacting and GLEBS motif-containing protein ZNF207 OS=Pongo abelii GN=ZNF207 PE=2 SV=1 | 1 | 116 | 3.0E-28 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0003676 | nucleic acid binding | Yes |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0003674 | molecular_function | No |
| GO:0005488 | binding | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 13 | 0.45 |
| Transcription Factor Class (based on PFAM domains) |
|---|
| C2H2 zinc finger |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|10183 MGKKRRGHPDVEDVLARPWCYYCERDFEDLKLLISHQKAKHFKCDRCGRRLNTAGGLSVHMNQVHKETLHQVENA LNNRQGLDVEIFGMEGIPHDILEQHRNRIIQNFYQAQEDRRIATGNPLPGQATHNPKKKIKMETKEELLVRVREW RAKKKAEREAVASGGDDGAAAANANVAPEQLSGQYQQPQQGFEQASYAGQAAHGQPPYGYHANSLPARPPGSVGA PPGLPQRLTEGTDRNVAAGAQAAATGDDIDKMIRMAEAGVKSTQKAEDGGDGEKKSKKGRLVYDDAEVSPEEKMA AMPRYAFHPDIAAA* |
| Coding | >Hirsu2|10183 ATGGGGAAGAAGCGGCGCGGACACCCCGACGTCGAGGACGTCCTCGCTCGTCCGTGGTGCTACTACTGCGAGCGA GACTTTGAGGACTTGAAGCTCCTCATCTCTCATCAGAAAGCAAAGCACTTCAAGTGCGACAGATGCGGCAGACGT CTCAACACTGCAGGAGGTCTCTCCGTCCACATGAACCAAGTCCACAAAGAAACGCTCCACCAGGTCGAGAATGCG CTCAATAATCGCCAGGGCCTCGACGTGGAGATTTTCGGCATGGAAGGTATCCCGCACGACATTCTCGAACAACAT CGGAACCGCATCATCCAGAACTTCTACCAGGCGCAGGAGGACCGCCGAATCGCCACGGGAAACCCCCTCCCCGGC CAAGCCACCCACAACCCCAAGAAGAAGATCAAGATGGAGACGAAAGAGGAGCTGCTGGTGAGGGTCAGGGAATGG CGCGCCAAGAAGAAGGCCGAGAGAGAGGCGGTCGCTAGCGGAGGTGACGATGGTGCTGCCGCCGCGAACGCGAAC GTCGCCCCAGAACAACTCAGCGGCCAATACCAGCAGCCACAGCAAGGGTTCGAGCAAGCAAGCTACGCGGGCCAG GCTGCTCACGGCCAGCCTCCCTACGGATACCATGCCAACTCACTGCCGGCCCGGCCCCCCGGGAGCGTGGGAGCT CCTCCCGGCCTGCCGCAACGGCTGACTGAAGGAACCGACAGGAACGTCGCGGCTGGGGCGCAGGCCGCCGCGACG GGCGACGACATCGACAAGATGATTCGCATGGCCGAAGCGGGCGTCAAGTCGACGCAAAAGGCCGAGGACGGCGGG GACGGGGAGAAGAAGTCGAAGAAGGGCAGGCTGGTGTACGACGACGCGGAAGTCAGCCCGGAGGAGAAGATGGCG GCAATGCCGCGCTACGCATTCCACCCAGACATTGCGGCGGCCTGA |
| Transcript | >Hirsu2|10183 ATGGGGAAGAAGCGGCGCGGACACCCCGACGTCGAGGACGTCCTCGCTCGTCCGTGGTGCTACTACTGCGAGCGA GACTTTGAGGACTTGAAGCTCCTCATCTCTCATCAGAAAGCAAAGCACTTCAAGTGCGACAGATGCGGCAGACGT CTCAACACTGCAGGAGGTCTCTCCGTCCACATGAACCAAGTCCACAAAGAAACGCTCCACCAGGTCGAGAATGCG CTCAATAATCGCCAGGGCCTCGACGTGGAGATTTTCGGCATGGAAGGTATCCCGCACGACATTCTCGAACAACAT CGGAACCGCATCATCCAGAACTTCTACCAGGCGCAGGAGGACCGCCGAATCGCCACGGGAAACCCCCTCCCCGGC CAAGCCACCCACAACCCCAAGAAGAAGATCAAGATGGAGACGAAAGAGGAGCTGCTGGTGAGGGTCAGGGAATGG CGCGCCAAGAAGAAGGCCGAGAGAGAGGCGGTCGCTAGCGGAGGTGACGATGGTGCTGCCGCCGCGAACGCGAAC GTCGCCCCAGAACAACTCAGCGGCCAATACCAGCAGCCACAGCAAGGGTTCGAGCAAGCAAGCTACGCGGGCCAG GCTGCTCACGGCCAGCCTCCCTACGGATACCATGCCAACTCACTGCCGGCCCGGCCCCCCGGGAGCGTGGGAGCT CCTCCCGGCCTGCCGCAACGGCTGACTGAAGGAACCGACAGGAACGTCGCGGCTGGGGCGCAGGCCGCCGCGACG GGCGACGACATCGACAAGATGATTCGCATGGCCGAAGCGGGCGTCAAGTCGACGCAAAAGGCCGAGGACGGCGGG GACGGGGAGAAGAAGTCGAAGAAGGGCAGGCTGGTGTACGACGACGCGGAAGTCAGCCCGGAGGAGAAGATGGCG GCAATGCCGCGCTACGCATTCCACCCAGACATTGCGGCGGCCTGA |
| Gene | >Hirsu2|10183 ATGGGGAAGAAGCGGCGCGGACACCCCGACGTCGAGGACGTCCTCGCTCGTCCGTGGTGCTACTACTGTGCGGTG CCGCGTCCAGCCGAGACGTGAGAGGCTCGTAATACTGATATGGATCACCTCAGGCGAGCGAGACTTTGAGGACTT GAAGCTCCTCATCTCTCATCAGAAAGCAAAGCACTTCAAGTGCGACAGATGCGGCAGACGTCTCAACACTGCAGG AGGTACGGCACGCAGCGCAACTGCCAATCTGCCCGAGCGCGAAATGATCATGGAGAGTGAGAGATGGAGTAGCTG ATAGCCTCGGTGTGTGCACCCTTTAGGTCTCTCCGTCCACATGAACCAAGTCCACAAAGAAACGCTCCACCAGGT CGAGAATGCGCTCAATAATCGCCAGGGCCTCGACGTGGAGATTTTCGGCATGGAAGGTATCCCGCACGACATTCT CGAACAACATCGGAACCGCATCATCCAGAACTTCTACCAGGCGCAGGAGGACCGCCGAATCGCCACGGGAAACCC CCTCCCCGGCCAAGCCACCCACAACCCCAAGAAGAAGATCAAGATGGAGACGAAAGAGGAGCTGCTGGTGAGGGT CAGGGAATGGCGCGCCAAGAAGAAGGCCGAGAGAGAGGCGGTCGCTAGCGGAGGTGACGATGGTGCTGCCGCCGC GAACGCGAACGTCGCCCCAGAACAACTCGTAAGGCTCTCCCCACTCCTCTTCCTTGTACGAGAGACCACGAGCAT GTGCTTCCCGTCATTGCTAACTCCCCGATCCAGAGCGGCCAATACCAGCAGCCACAGCAAGGGTTCGAGCAAGCA AGCTACGCGGGCCAGGCTGCTCACGGCCAGCCTCCCTACGGATACCATGCCAACTCACTGCCGGCCCGGCCCCCC GGGAGCGTGGGAGCTCCTCCCGGCCTGCCGCAACGGCTGACTGAAGGAACCGACAGGAACGTCGCGGCTGGGGCG CAGGCCGCCGCGACGGGCGACGACATCGACAAGATGATTCGCATGGCCGAAGCGGGCGTCAAGTCGACGCAAAAG GCCGAGGACGGCGGGGACGGGGAGAAGAAGTCGAAGAAGGGCAGGCTGGTGTACGACGACGCGGAAGTCAGCCCG GAGGAGAAGATGGCGGCAATGCCGCGCTACGCATTCCACCCAGACATTGCGGCGGCCTGA |