Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|10171
Gene name
LocationContig_8:42139..42619
Strand+
Gene length (bp)480
Transcript length (bp)480
Coding sequence length (bp)480
Protein length (aa) 160

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF10344 Fmp27 Mitochondrial protein from FMP27 4.0E-07 1 36

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 44 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|10171
MKEVDIDVHRLKPKSPAHRMYFLSKDIVHQALAAASAAGWGLAEIQWPGILLRCLSPLCASASLKRLLLKGLRWA
SRPAAARRGSRPPKSALAAACHGVLTPQPRAPDPLVGVDGGVLDRVAQVLQVDADLVRAAGDGHAPRSTPASSTA
PMGGSYTQP*
Coding >Hirsu2|10171
ATGAAGGAGGTTGACATCGACGTCCATCGCCTCAAACCCAAGTCGCCCGCGCACCGCATGTACTTTCTGTCCAAG
GACATCGTCCACCAGGCCCTGGCCGCCGCCTCCGCAGCTGGCTGGGGTCTAGCAGAAATTCAATGGCCAGGAATC
CTGCTCCGGTGCCTCTCACCTCTGTGCGCGTCAGCCTCCCTCAAAAGGTTGTTGCTGAAGGGGCTCCGTTGGGCT
TCGCGGCCGGCCGCCGCCCGGCGCGGCTCTCGTCCGCCCAAATCGGCGCTTGCCGCCGCTTGCCACGGCGTCCTC
ACGCCCCAGCCGCGGGCCCCAGACCCGCTAGTTGGCGTAGATGGCGGCGTTCTAGATCGGGTGGCCCAGGTACTG
CAGGTAGACGCGGATCTAGTGCGTGCGGCCGGTGACGGGCATGCACCACGGAGCACGCCCGCCTCATCTACAGCG
CCGATGGGAGGATCGTATACTCAGCCATGA
Transcript >Hirsu2|10171
ATGAAGGAGGTTGACATCGACGTCCATCGCCTCAAACCCAAGTCGCCCGCGCACCGCATGTACTTTCTGTCCAAG
GACATCGTCCACCAGGCCCTGGCCGCCGCCTCCGCAGCTGGCTGGGGTCTAGCAGAAATTCAATGGCCAGGAATC
CTGCTCCGGTGCCTCTCACCTCTGTGCGCGTCAGCCTCCCTCAAAAGGTTGTTGCTGAAGGGGCTCCGTTGGGCT
TCGCGGCCGGCCGCCGCCCGGCGCGGCTCTCGTCCGCCCAAATCGGCGCTTGCCGCCGCTTGCCACGGCGTCCTC
ACGCCCCAGCCGCGGGCCCCAGACCCGCTAGTTGGCGTAGATGGCGGCGTTCTAGATCGGGTGGCCCAGGTACTG
CAGGTAGACGCGGATCTAGTGCGTGCGGCCGGTGACGGGCATGCACCACGGAGCACGCCCGCCTCATCTACAGCG
CCGATGGGAGGATCGTATACTCAGCCATGA
Gene >Hirsu2|10171
ATGAAGGAGGTTGACATCGACGTCCATCGCCTCAAACCCAAGTCGCCCGCGCACCGCATGTACTTTCTGTCCAAG
GACATCGTCCACCAGGCCCTGGCCGCCGCCTCCGCAGCTGGCTGGGGTCTAGCAGAAATTCAATGGCCAGGAATC
CTGCTCCGGTGCCTCTCACCTCTGTGCGCGTCAGCCTCCCTCAAAAGGTTGTTGCTGAAGGGGCTCCGTTGGGCT
TCGCGGCCGGCCGCCGCCCGGCGCGGCTCTCGTCCGCCCAAATCGGCGCTTGCCGCCGCTTGCCACGGCGTCCTC
ACGCCCCAGCCGCGGGCCCCAGACCCGCTAGTTGGCGTAGATGGCGGCGTTCTAGATCGGGTGGCCCAGGTACTG
CAGGTAGACGCGGATCTAGTGCGTGCGGCCGGTGACGGGCATGCACCACGGAGCACGCCCGCCTCATCTACAGCG
CCGATGGGAGGATCGTATACTCAGCCATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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