Fungal Genomics

at Utrecht University

General Properties

Protein ID	Hirsu2\|10155
Gene name
Location	Contig_799:4004..6608
Strand	-
Gene length (bp)	2604
Transcript length (bp)	2487
Coding sequence length (bp)	2487
Protein length (aa)	829

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF01302	CAP_GLY	CAP-Gly domain	5.8E-15	120	187
PF16641	CLIP1_ZNF	CLIP1 zinc knuckle	6.3E-04	807	822

Swissprot hits

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|P79065\|TIP1_SCHPO	Tip elongation protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tip1 PE=1 SV=1	120	187	2.0E-09
sp\|P11709\|BIK1_YEAST	Nuclear fusion protein BIK1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=BIK1 PE=1 SV=1	120	189	2.0E-08
sp\|P34531\|YM92_CAEEL	Uncharacterized protein M01A8.2 OS=Caenorhabditis elegans GN=M01A8.2 PE=3 SV=4	120	188	5.0E-08
sp\|P49454\|CENPF_HUMAN	Centromere protein F OS=Homo sapiens GN=CENPF PE=1 SV=2	348	650	5.0E-08
sp\|P30622\|CLIP1_HUMAN	CAP-Gly domain-containing linker protein 1 OS=Homo sapiens GN=CLIP1 PE=1 SV=2	96	230	7.0E-08

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|P79065\|TIP1_SCHPO	Tip elongation protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tip1 PE=1 SV=1	120	187	2.0E-09
sp\|P11709\|BIK1_YEAST	Nuclear fusion protein BIK1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=BIK1 PE=1 SV=1	120	189	2.0E-08
sp\|P34531\|YM92_CAEEL	Uncharacterized protein M01A8.2 OS=Caenorhabditis elegans GN=M01A8.2 PE=3 SV=4	120	188	5.0E-08
sp\|P49454\|CENPF_HUMAN	Centromere protein F OS=Homo sapiens GN=CENPF PE=1 SV=2	348	650	5.0E-08
sp\|P30622\|CLIP1_HUMAN	CAP-Gly domain-containing linker protein 1 OS=Homo sapiens GN=CLIP1 PE=1 SV=2	96	230	7.0E-08
sp\|P35458\|DCTN1_CHICK	Dynactin subunit 1 OS=Gallus gallus GN=DCTN1 PE=1 SV=2	118	585	3.0E-07
sp\|Q922J3\|CLIP1_MOUSE	CAP-Gly domain-containing linker protein 1 OS=Mus musculus GN=Clip1 PE=1 SV=1	99	192	5.0E-07
sp\|O42184\|CLIP1_CHICK	CAP-Gly domain-containing linker protein 1 OS=Gallus gallus GN=CLIP1 PE=2 SV=1	63	215	5.0E-07
sp\|P30622\|CLIP1_HUMAN	CAP-Gly domain-containing linker protein 1 OS=Homo sapiens GN=CLIP1 PE=1 SV=2	99	192	7.0E-07
sp\|O42184\|CLIP1_CHICK	CAP-Gly domain-containing linker protein 1 OS=Gallus gallus GN=CLIP1 PE=2 SV=1	115	200	7.0E-07
sp\|Q922J3\|CLIP1_MOUSE	CAP-Gly domain-containing linker protein 1 OS=Mus musculus GN=Clip1 PE=1 SV=1	106	237	1.0E-06

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GO

(None)

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 22	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2\|10155 MAPTATATATTSTTTTTTTSSASPAAPAAFHSGRPAFSRSLRKPASSASTPDLGSAYAAQSRLVPPGLSRKASLV ALTSSSLASIPDVSESYALDSVLSDSSYAMPPATPARPAADDVAVGEAVDVPGGMHGTLRFLGSVQGKKGLFAGV ELHADFLARGKNSGDVDGVSYFTTTTPGAGIFVPVPKIARRGTANGSSTASFPITPTPNGPAALRNGNGHSTSLT PPTPALHKLSASLGPGARAPSPHLKRPRTSLPRPDSPLRRAQMTPGPRPSIGTPAKVPSRYGSPTNRFAQSVRGT AGDPSKKPARLDRKPSIGPRSASALGTTPAFDDDPSHVGLQRSKTNGSAGSISSLNMKMHRPASRALAVNDDEID RLRSQLEDRDRQLKEQATTLAEMESSLVELQSLIEHPDGPRFRRNSLDDKDSAQLRHMLREKNDKIAMLTAEFDA HRADFRSTIDTLELASAETERVYEKRIEELVAELRELEHRNLDVDTVASQLKQLEELVQELEEGLEDARRGEAEA RGEAEFLRGEVERTRSELRREREKGGSGANAQGDVVTSSKELEQKEDEIRGLKAIIHSLSRDPMPAGDGRGPAQR PSSLGGSAGADLVQGKIARDNLERQVAELQTLLERRTAREEELELELDALRGSGHGPQGHPLPAQRSTQRDSRDT VIPVRTHGSRTPDATHKRGNTLDTMHESDTVSTATETSTLWCEICETSGHDILTCTNMFGPDSGKNGGEAKTGRD GPKPAPVAVKGDGAEPAPLSPVKPRLAASTTPVKIMPNPMESGPVAGKESGVVDPEKWCAVCERDGHDSVDCPFE DAF*
Coding	>Hirsu2\|10155 ATGGCTCCCACCGCCACCGCGACCGCCACCACCTCCACCACCACCACCACCACCACCTCCTCCGCCAGCCCAGCA GCGCCCGCCGCCTTCCACAGCGGCCGCCCGGCCTTCTCCCGCTCGCTGCGCAAGCCTGCCTCCTCGGCCTCGACC CCCGACCTGGGCTCCGCCTACGCCGCCCAGTCGAGGCTCGTCCCGCCCGGCCTGTCGCGCAAGGCCTCGCTCGTC GCCCTCACCTCCAGCTCGCTCGCCAGCATCCCCGATGTCAGCGAGAGCTACGCCCTCGACTCCGTCCTGAGCGAC TCGTCCTACGCCATGCCCCCTGCCACCCCCGCCAGGCCCGCCGCCGACGACGTCGCCGTCGGCGAGGCCGTCGAC GTCCCGGGCGGCATGCACGGCACCCTGCGCTTCCTCGGCTCCGTCCAGGGCAAGAAGGGCCTCTTTGCCGGCGTC GAGCTGCACGCCGACTTCCTGGCACGTGGCAAGAACAGCGGTGACGTCGACGGAGTCTCCTACTTCACCACCACG ACGCCCGGCGCCGGCATCTTCGTCCCCGTGCCCAAGATCGCTCGCCGGGGGACTGCCAATGGCTCCTCCACCGCC AGCTTCCCCATCACGCCCACGCCCAACGGCCCGGCCGCCCTGAGGAACGGAAACGGCCATTCGACGAGCCTCACG CCCCCGACGCCCGCCCTGCACAAGCTCAGCGCCTCGCTCGGCCCCGGTGCCCGCGCCCCCAGCCCGCATCTCAAG CGGCCGCGGACCTCGCTGCCCCGTCCCGATTCCCCCCTCCGCCGCGCCCAGATGACGCCCGGGCCGAGGCCCTCC ATCGGGACCCCGGCCAAGGTGCCTTCGCGATACGGCAGCCCGACCAACAGGTTCGCCCAGAGCGTCCGCGGCACC GCCGGCGACCCCAGCAAGAAGCCGGCCAGGCTCGACCGCAAGCCCAGCATCGGCCCCCGCAGCGCCTCGGCACTG GGCACCACGCCCGCCTTCGACGACGATCCGTCCCATGTCGGCCTGCAGCGATCCAAGACCAACGGTAGTGCCGGG TCCATCTCGTCGCTCAACATGAAGATGCATCGTCCCGCCTCGCGCGCACTGGCCGTCAACGACGACGAGATCGAC CGTCTGCGCTCCCAGCTCGAGGACCGCGACCGCCAGCTCAAGGAGCAGGCCACCACGCTGGCCGAGATGGAGAGC AGCCTCGTCGAGCTGCAGTCCCTCATCGAGCACCCGGACGGGCCCCGGTTCCGGAGGAACAGCCTGGACGACAAG GACTCGGCCCAGCTCCGCCACATGCTGCGGGAGAAGAACGACAAGATCGCCATGCTCACCGCAGAGTTCGACGCC CACCGGGCCGACTTCCGGAGTACTATCGACACCCTCGAGCTGGCCAGCGCCGAGACGGAGCGCGTGTACGAGAAG CGGATCGAGGAGCTCGTGGCCGAGCTGCGGGAGCTGGAGCACAGGAACCTGGACGTGGACACGGTGGCGAGCCAG CTGAAGCAGCTCGAGGAGCTGGTCCAGGAGCTCGAGGAGGGCCTCGAGGACGCCCGCCGCGGCGAGGCCGAGGCC CGCGGCGAGGCCGAGTTCCTGCGCGGCGAGGTGGAGAGGACCCGGTCGGAGCTCCGGCGCGAGCGCGAAAAGGGC GGCTCCGGCGCCAACGCCCAGGGCGACGTCGTCACCTCGTCCAAGGAGCTGGAGCAGAAGGAGGACGAGATCAGG GGCCTCAAGGCCATCATCCACTCGCTCAGCCGCGACCCGATGCCGGCAGGCGACGGCCGGGGCCCCGCCCAACGG CCGAGCTCGCTGGGCGGCTCCGCCGGCGCCGACTTGGTACAGGGCAAGATTGCCCGCGACAACCTGGAGAGGCAG GTGGCCGAGCTGCAGACGCTCCTGGAGAGGAGGACGGCCCGGGAGGAGGAGCTGGAGCTGGAGCTCGACGCGCTA CGGGGCAGCGGCCACGGTCCGCAGGGACACCCGCTGCCGGCGCAGCGGTCGACGCAGAGAGACTCGCGCGACACG GTGATACCGGTCCGCACGCACGGGTCGCGGACGCCCGACGCGACGCACAAGAGGGGCAACACGCTCGACACGATG CACGAGAGCGACACGGTGTCGACGGCGACGGAGACTAGCACGCTCTGGTGCGAGATCTGCGAGACGAGCGGGCAC GACATCCTGACCTGCACCAACATGTTCGGTCCCGACAGCGGCAAGAACGGAGGCGAGGCCAAGACGGGCCGCGAC GGGCCGAAGCCGGCGCCGGTGGCCGTCAAGGGCGACGGCGCCGAGCCGGCGCCGCTGTCGCCCGTCAAGCCTCGG CTGGCGGCGTCGACGACGCCGGTCAAGATCATGCCGAACCCGATGGAGTCTGGCCCGGTGGCGGGCAAGGAGAGC GGCGTGGTGGACCCGGAGAAGTGGTGCGCGGTATGCGAGCGGGACGGCCACGACAGCGTCGACTGCCCGTTCGAG GACGCGTTCTAG
Transcript	>Hirsu2\|10155 ATGGCTCCCACCGCCACCGCGACCGCCACCACCTCCACCACCACCACCACCACCACCTCCTCCGCCAGCCCAGCA GCGCCCGCCGCCTTCCACAGCGGCCGCCCGGCCTTCTCCCGCTCGCTGCGCAAGCCTGCCTCCTCGGCCTCGACC CCCGACCTGGGCTCCGCCTACGCCGCCCAGTCGAGGCTCGTCCCGCCCGGCCTGTCGCGCAAGGCCTCGCTCGTC GCCCTCACCTCCAGCTCGCTCGCCAGCATCCCCGATGTCAGCGAGAGCTACGCCCTCGACTCCGTCCTGAGCGAC TCGTCCTACGCCATGCCCCCTGCCACCCCCGCCAGGCCCGCCGCCGACGACGTCGCCGTCGGCGAGGCCGTCGAC GTCCCGGGCGGCATGCACGGCACCCTGCGCTTCCTCGGCTCCGTCCAGGGCAAGAAGGGCCTCTTTGCCGGCGTC GAGCTGCACGCCGACTTCCTGGCACGTGGCAAGAACAGCGGTGACGTCGACGGAGTCTCCTACTTCACCACCACG ACGCCCGGCGCCGGCATCTTCGTCCCCGTGCCCAAGATCGCTCGCCGGGGGACTGCCAATGGCTCCTCCACCGCC AGCTTCCCCATCACGCCCACGCCCAACGGCCCGGCCGCCCTGAGGAACGGAAACGGCCATTCGACGAGCCTCACG CCCCCGACGCCCGCCCTGCACAAGCTCAGCGCCTCGCTCGGCCCCGGTGCCCGCGCCCCCAGCCCGCATCTCAAG CGGCCGCGGACCTCGCTGCCCCGTCCCGATTCCCCCCTCCGCCGCGCCCAGATGACGCCCGGGCCGAGGCCCTCC ATCGGGACCCCGGCCAAGGTGCCTTCGCGATACGGCAGCCCGACCAACAGGTTCGCCCAGAGCGTCCGCGGCACC GCCGGCGACCCCAGCAAGAAGCCGGCCAGGCTCGACCGCAAGCCCAGCATCGGCCCCCGCAGCGCCTCGGCACTG GGCACCACGCCCGCCTTCGACGACGATCCGTCCCATGTCGGCCTGCAGCGATCCAAGACCAACGGTAGTGCCGGG TCCATCTCGTCGCTCAACATGAAGATGCATCGTCCCGCCTCGCGCGCACTGGCCGTCAACGACGACGAGATCGAC CGTCTGCGCTCCCAGCTCGAGGACCGCGACCGCCAGCTCAAGGAGCAGGCCACCACGCTGGCCGAGATGGAGAGC AGCCTCGTCGAGCTGCAGTCCCTCATCGAGCACCCGGACGGGCCCCGGTTCCGGAGGAACAGCCTGGACGACAAG GACTCGGCCCAGCTCCGCCACATGCTGCGGGAGAAGAACGACAAGATCGCCATGCTCACCGCAGAGTTCGACGCC CACCGGGCCGACTTCCGGAGTACTATCGACACCCTCGAGCTGGCCAGCGCCGAGACGGAGCGCGTGTACGAGAAG CGGATCGAGGAGCTCGTGGCCGAGCTGCGGGAGCTGGAGCACAGGAACCTGGACGTGGACACGGTGGCGAGCCAG CTGAAGCAGCTCGAGGAGCTGGTCCAGGAGCTCGAGGAGGGCCTCGAGGACGCCCGCCGCGGCGAGGCCGAGGCC CGCGGCGAGGCCGAGTTCCTGCGCGGCGAGGTGGAGAGGACCCGGTCGGAGCTCCGGCGCGAGCGCGAAAAGGGC GGCTCCGGCGCCAACGCCCAGGGCGACGTCGTCACCTCGTCCAAGGAGCTGGAGCAGAAGGAGGACGAGATCAGG GGCCTCAAGGCCATCATCCACTCGCTCAGCCGCGACCCGATGCCGGCAGGCGACGGCCGGGGCCCCGCCCAACGG CCGAGCTCGCTGGGCGGCTCCGCCGGCGCCGACTTGGTACAGGGCAAGATTGCCCGCGACAACCTGGAGAGGCAG GTGGCCGAGCTGCAGACGCTCCTGGAGAGGAGGACGGCCCGGGAGGAGGAGCTGGAGCTGGAGCTCGACGCGCTA CGGGGCAGCGGCCACGGTCCGCAGGGACACCCGCTGCCGGCGCAGCGGTCGACGCAGAGAGACTCGCGCGACACG GTGATACCGGTCCGCACGCACGGGTCGCGGACGCCCGACGCGACGCACAAGAGGGGCAACACGCTCGACACGATG CACGAGAGCGACACGGTGTCGACGGCGACGGAGACTAGCACGCTCTGGTGCGAGATCTGCGAGACGAGCGGGCAC GACATCCTGACCTGCACCAACATGTTCGGTCCCGACAGCGGCAAGAACGGAGGCGAGGCCAAGACGGGCCGCGAC GGGCCGAAGCCGGCGCCGGTGGCCGTCAAGGGCGACGGCGCCGAGCCGGCGCCGCTGTCGCCCGTCAAGCCTCGG CTGGCGGCGTCGACGACGCCGGTCAAGATCATGCCGAACCCGATGGAGTCTGGCCCGGTGGCGGGCAAGGAGAGC GGCGTGGTGGACCCGGAGAAGTGGTGCGCGGTATGCGAGCGGGACGGCCACGACAGCGTCGACTGCCCGTTCGAG GACGCGTTCTAG
Gene	>Hirsu2\|10155 ATGGCTCCCACCGCCACCGCGACCGCCACCACCTCCACCACCACCACCACCACCACCTCCTCCGCCAGCCCAGCA GCGCCCGCCGCCTTCCACAGCGGCCGCCCGGCCTTCTCCCGCTCGCTGCGCAAGCCTGCCTCCTCGGCCTCGACC CCCGACCTGGGCTCCGCCTACGCCGCCCAGTCGAGGCTCGTCCCGCCCGGCCTGTCGCGCAAGGCCTCGCTCGTC GCCCTCACCTCCAGCTCGCTCGCCAGCATCCCCGATGTCAGCGAGAGCTACGCCCTCGACTCCGTCCTGAGCGAC TCGTCCTACGCCATGCCCCCTGCCACCCCCGCCAGGCCCGCCGCCGACGACGTCGCCGTCGGCGAGGCCGTCGAC GTCCCGGGCGGCATGCACGGCACCCTGCGCTTCCTCGGCTCCGTCCAGGGCAAGAAGGGCCTCTTTGCCGGCGTC GAGCTGCACGCCGACTTCCTGGCACGTGGCAAGAACAGCGGTGACGTCGACGGGTACGTCTGCTTCTCCCTGCGC CCTGCGCCCTGCGCACCATCACCATCACCATCACCATCATGAATGTCTGCCTGTCTGTCTGTCCGGCCCCCGGCT GACGCTCCACCGCCACGCAGAGTCTCCTACTTCACCACCACGACGCCCGGCGCCGGCATCTTCGTCCCCGTGCCC AAGATCGCTCGCCGGGGGACTGCCAATGGCTCCTCCACCGCCAGCTTCCCCATCACGCCCACGCCCAACGGCCCG GCCGCCCTGAGGAACGGAAACGGCCATTCGACGAGCCTCACGCCCCCGACGCCCGCCCTGCACAAGCTCAGCGCC TCGCTCGGCCCCGGTGCCCGCGCCCCCAGCCCGCATCTCAAGCGGCCGCGGACCTCGCTGCCCCGTCCCGATTCC CCCCTCCGCCGCGCCCAGATGACGCCCGGGCCGAGGCCCTCCATCGGGACCCCGGCCAAGGTGCCTTCGCGATAC GGCAGCCCGACCAACAGGTTCGCCCAGAGCGTCCGCGGCACCGCCGGCGACCCCAGCAAGAAGCCGGCCAGGCTC GACCGCAAGCCCAGCATCGGCCCCCGCAGCGCCTCGGCACTGGGCACCACGCCCGCCTTCGACGACGATCCGTCC CATGTCGGCCTGCAGCGATCCAAGACCAACGGTAGTGCCGGGTCCATCTCGTCGCTCAACATGAAGATGCATCGT CCCGCCTCGCGCGCACTGGCCGTCAACGACGACGAGATCGACCGTCTGCGCTCCCAGCTCGAGGACCGCGACCGC CAGCTCAAGGAGCAGGCCACCACGCTGGCCGAGATGGAGAGCAGCCTCGTCGAGCTGCAGTCCCTCATCGAGCAC CCGGACGGGCCCCGGTTCCGGAGGAACAGCCTGGACGACAAGGACTCGGCCCAGCTCCGCCACATGCTGCGGGAG AAGAACGACAAGATCGCCATGCTCACCGCAGAGTTCGACGCCCACCGGGCCGACTTCCGGAGTACTATCGACACC CTCGAGCTGGCCAGCGCCGAGACGGAGCGCGTGTACGAGAAGCGGATCGAGGAGCTCGTGGCCGAGCTGCGGGAG CTGGAGCACAGGAACCTGGACGTGGACACGGTGGCGAGCCAGCTGAAGCAGCTCGAGGAGCTGGTCCAGGAGCTC GAGGAGGGCCTCGAGGACGCCCGCCGCGGCGAGGCCGAGGCCCGCGGCGAGGCCGAGTTCCTGCGCGGCGAGGTG GAGAGGACCCGGTCGGAGCTCCGGCGCGAGCGCGAAAAGGGCGGCTCCGGCGCCAACGCCCAGGGCGACGTCGTC ACCTCGTCCAAGGAGCTGGAGCAGAAGGAGGACGAGATCAGGGGCCTCAAGGCCATCATCCACTCGCTCAGCCGC GACCCGATGCCGGCAGGCGACGGCCGGGGCCCCGCCCAACGGCCGAGCTCGCTGGGCGGCTCCGCCGGCGCCGAC TTGGTACAGGGCAAGATTGCCCGCGACAACCTGGAGAGGCAGGTGGCCGAGCTGCAGACGCTCCTGGAGAGGAGG ACGGCCCGGGAGGAGGAGCTGGAGCTGGAGCTCGACGCGCTACGGGGCAGCGGCCACGGTCCGCAGGGACACCCG CTGCCGGCGCAGCGGTCGACGCAGAGAGACTCGCGCGACACGGTGATACCGGTCCGCACGCACGGGTCGCGGACG CCCGACGCGACGCACAAGAGGGGCAACACGCTCGACACGATGCACGAGAGCGACACGGTGTCGACGGCGACGGAG ACTAGCACGCTCTGGTGCGAGATCTGCGAGACGAGCGGGCACGACATCCTGACCTGCACCAACATGTTCGGTCCC GACAGCGGCAAGAACGGAGGCGAGGCCAAGACGGGCCGCGACGGGCCGAAGCCGGCGCCGGTGGCCGTCAAGGGC GACGGCGCCGAGCCGGCGCCGCTGTCGCCCGTCAAGCCTCGGCTGGCGGCGTCGACGACGCCGGTCAAGATCATG CCGAACCCGATGGAGTCTGGCCCGGTGGCGGGCAAGGAGAGCGGCGTGGTGGACCCGGAGAAGTGGTGCGCGGTA TGCGAGCGGGACGGCCACGACAGCGTCGACTGCCCGTTCGAGGACGCGTTCTAG

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