Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|10114
Gene name
LocationContig_79:41812..42542
Strand-
Gene length (bp)730
Transcript length (bp)624
Coding sequence length (bp)624
Protein length (aa) 208

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF08031 BBE Berberine and berberine like 1.3E-04 157 193

Swissprot hits

(None)

GO

GO Term Description Terminal node
GO:0016491 oxidoreductase activity Yes
GO:0055114 oxidation-reduction process Yes
GO:0050660 flavin adenine dinucleotide binding Yes
GO:1901265 nucleoside phosphate binding No
GO:0050662 coenzyme binding No
GO:0005488 binding No
GO:0003824 catalytic activity No
GO:0043168 anion binding No
GO:0003674 molecular_function No
GO:0097159 organic cyclic compound binding No
GO:0043167 ion binding No
GO:0000166 nucleotide binding No
GO:0036094 small molecule binding No
GO:0008150 biological_process No
GO:0048037 cofactor binding No
GO:1901363 heterocyclic compound binding No
GO:0008152 metabolic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 13 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|10114
LLCHVFVNGTEAQGRAFFRPLLELQPLKMWARTMPYKEANRQATDTAGRKRRLLSGANFKVPLAVELVGAVVREF
VPFLTENGIALASGVMFEMFPNRKIREVDPGATAFPCRGDWYHVSVCFTWDNASMDEDIRAFNSRLIRMISERGW
MSDGSRYLNYDGGDYIDPMRAFGNNLLSLHLLKADYDPHNLFRKYGLWHRYSWESRG*
Coding >Hirsu2|10114
CTGCTGTGCCACGTCTTCGTCAACGGCACCGAGGCCCAAGGCCGGGCCTTCTTCCGGCCCCTGCTCGAGCTGCAG
CCGCTGAAGATGTGGGCACGTACGATGCCGTACAAGGAGGCCAACCGGCAGGCGACCGACACCGCGGGCCGCAAG
CGCCGCCTCCTCAGCGGCGCCAACTTCAAGGTGCCCCTGGCCGTCGAACTCGTCGGCGCCGTCGTCCGCGAGTTC
GTGCCCTTCCTGACGGAGAACGGCATCGCCCTCGCGTCCGGCGTTATGTTCGAGATGTTCCCCAACCGCAAGATC
CGCGAGGTTGACCCCGGCGCCACCGCGTTCCCCTGCCGCGGCGACTGGTACCACGTCTCGGTGTGCTTCACTTGG
GACAACGCGTCCATGGACGAGGATATCCGTGCCTTCAACAGCCGCCTCATCCGGATGATCAGCGAACGGGGTTGG
ATGAGCGACGGAAGCAGGTACCTCAACTACGACGGGGGGGATTATATCGATCCGATGCGGGCGTTTGGAAATAAC
CTGCTAAGCCTCCATTTGCTCAAGGCGGATTACGATCCGCACAACCTTTTCCGCAAGTACGGCCTCTGGCACAGG
TACAGTTGGGAATCAAGAGGCTGA
Transcript >Hirsu2|10114
CTGCTGTGCCACGTCTTCGTCAACGGCACCGAGGCCCAAGGCCGGGCCTTCTTCCGGCCCCTGCTCGAGCTGCAG
CCGCTGAAGATGTGGGCACGTACGATGCCGTACAAGGAGGCCAACCGGCAGGCGACCGACACCGCGGGCCGCAAG
CGCCGCCTCCTCAGCGGCGCCAACTTCAAGGTGCCCCTGGCCGTCGAACTCGTCGGCGCCGTCGTCCGCGAGTTC
GTGCCCTTCCTGACGGAGAACGGCATCGCCCTCGCGTCCGGCGTTATGTTCGAGATGTTCCCCAACCGCAAGATC
CGCGAGGTTGACCCCGGCGCCACCGCGTTCCCCTGCCGCGGCGACTGGTACCACGTCTCGGTGTGCTTCACTTGG
GACAACGCGTCCATGGACGAGGATATCCGTGCCTTCAACAGCCGCCTCATCCGGATGATCAGCGAACGGGGTTGG
ATGAGCGACGGAAGCAGGTACCTCAACTACGACGGGGGGGATTATATCGATCCGATGCGGGCGTTTGGAAATAAC
CTGCTAAGCCTCCATTTGCTCAAGGCGGATTACGATCCGCACAACCTTTTCCGCAAGTACGGCCTCTGGCACAGG
TACAGTTGGGAATCAAGAGGCTGA
Gene >Hirsu2|10114
CTGCTGTGCCACGTCTTCGTCAACGGCACCGAGGCCCAAGGCCGGGCCTTCTTCCGGCCCCTGCTCGAGCTGCAG
CCGCTGAAGATGTGGGCACGTACGATGCCGTACAAGGAGGCCAACCGGCAGGCGACCGACACCGCGGGCCGCAAG
CGCCGCCTCCTCAGCGGCGCCAACTTCAAGGTGCCCCTGGCCGTCGAACTCGTCGGCGCCGTCGTCCGCGAGTTC
GTGCCCTTCCTGACGGAGAACGGCATCGCCCTCGCGTCCGGCGTTATGTTCGAGATGTTCCCCAACCGCAAGATC
CGCGAGGTTGACCCCGGCGCCACCGCGTTCCCCTGCCGCGGCGACTGGTACCACGTCTCGGTGTGCTTCACTTGG
GACAACGCGTCCATGGACGAGGATATCCGTGCCTTCAACAGCCGCCTCATCCGGATGATCAGCGAACGGGGTTGG
ATGAGCGACGGAAGCAGGTACCTCAACTACGACGGTCAGTATCCAGCTCCTTTCCTCTTCTCTTCCCTCGCCTTG
GCCCCAGCCCGGCCCTTGAGGCATCATGTACACAATCGGGCCGTCGACGCTGACTTGCAGCCCAGGGGGGGATTA
TATCGATCCGATGCGGGCGTTTGGAAATAACCTGCTAAGCCTCCATTTGCTCAAGGCGGATTACGATCCGCACAA
CCTTTTCCGCAAGTACGGCCTCTGGCACAGGTACAGTTGGGAATCAAGAGGCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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