© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|10112 |
| Gene name | |
| Location | Contig_79:30925..31768 |
| Strand | + |
| Gene length (bp) | 843 |
| Transcript length (bp) | 699 |
| Coding sequence length (bp) | 699 |
| Protein length (aa) | 233 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF20238 | DUF6595 | Family of unknown function (DUF6595) | 3.1E-25 | 18 | 156 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Extracellular | 0.0757 | 0.058 | 0.8447 | 0.4037 | 0.079 | 0.004 | 0.1358 | 0.0927 | 0.1329 | 0.0056 |
| Orthofinder run ID | 4 |
| Orthogroup | 1099 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|10112 MTNFFRALSALCFGLGTAHFQLRHPQAIGSGQEEEETAPCGGATPDFSGAAKLVDFHVGGEALAMRLTHQQSNWL FRATTDQKAESGWEQLFPIVMQSGLGDFCEPSVAAPSTFAGKKGVVSVVSSAVDGLLYQCVAVNFVQGSANRAPP ECKNSSSVQASFVNDDKLSALVGKQASVSASSSRSSTAPSAAATSTSAAASNRQPTTGRLGWNAGAAALVSGALL GGALLLA* |
| Coding | >Hirsu2|10112 ATGACCAACTTCTTCCGAGCCCTCTCGGCCCTCTGCTTCGGCCTCGGCACCGCTCACTTCCAGCTCCGCCATCCG CAGGCGATAGGGTCCGGTCAGGAGGAGGAGGAAACGGCGCCCTGCGGCGGCGCCACGCCCGACTTCTCCGGCGCC GCCAAGCTTGTCGATTTCCACGTCGGCGGCGAAGCCCTGGCCATGCGTCTCACCCACCAGCAGAGCAACTGGCTC TTCCGCGCCACGACGGACCAGAAGGCCGAGTCTGGCTGGGAGCAGCTCTTCCCCATCGTCATGCAGAGCGGCCTC GGCGACTTTTGCGAGCCGAGCGTCGCCGCCCCGTCCACGTTCGCCGGCAAGAAGGGCGTCGTGAGCGTCGTTTCC TCGGCCGTCGATGGGTTGCTGTACCAGTGTGTCGCCGTCAACTTCGTTCAAGGCTCCGCCAACCGCGCCCCCCCC GAATGCAAGAACTCGTCCTCGGTCCAGGCCTCCTTCGTCAACGACGACAAGCTCTCGGCCCTGGTGGGCAAGCAG GCATCGGTCTCGGCCTCGTCATCGCGCTCGTCGACGGCCCCATCCGCGGCAGCAACGAGCACCAGCGCGGCTGCA TCGAATCGGCAGCCGACGACGGGCCGTCTTGGATGGAACGCCGGCGCTGCGGCCCTCGTCTCCGGCGCTCTTCTC GGGGGGGCGCTGCTGCTGGCATGA |
| Transcript | >Hirsu2|10112 ATGACCAACTTCTTCCGAGCCCTCTCGGCCCTCTGCTTCGGCCTCGGCACCGCTCACTTCCAGCTCCGCCATCCG CAGGCGATAGGGTCCGGTCAGGAGGAGGAGGAAACGGCGCCCTGCGGCGGCGCCACGCCCGACTTCTCCGGCGCC GCCAAGCTTGTCGATTTCCACGTCGGCGGCGAAGCCCTGGCCATGCGTCTCACCCACCAGCAGAGCAACTGGCTC TTCCGCGCCACGACGGACCAGAAGGCCGAGTCTGGCTGGGAGCAGCTCTTCCCCATCGTCATGCAGAGCGGCCTC GGCGACTTTTGCGAGCCGAGCGTCGCCGCCCCGTCCACGTTCGCCGGCAAGAAGGGCGTCGTGAGCGTCGTTTCC TCGGCCGTCGATGGGTTGCTGTACCAGTGTGTCGCCGTCAACTTCGTTCAAGGCTCCGCCAACCGCGCCCCCCCC GAATGCAAGAACTCGTCCTCGGTCCAGGCCTCCTTCGTCAACGACGACAAGCTCTCGGCCCTGGTGGGCAAGCAG GCATCGGTCTCGGCCTCGTCATCGCGCTCGTCGACGGCCCCATCCGCGGCAGCAACGAGCACCAGCGCGGCTGCA TCGAATCGGCAGCCGACGACGGGCCGTCTTGGATGGAACGCCGGCGCTGCGGCCCTCGTCTCCGGCGCTCTTCTC GGGGGGGCGCTGCTGCTGGCATGA |
| Gene | >Hirsu2|10112 ATGACCAACTTCTTCCGAGCCCTCTCGGCCCTCTGCTTCGGCCTCGGCACCGCTCACTTCCAGCTCCGCCATCCG CAGGCGATAGGGTCCGGTCAGGAGGAGGAGGAAACGGCGCCCTGCGGCGGCGCCACGCCCGACTTCTCCGGCGCC GCCAAGCTTGTCGATTTCCACGTCGGCGGCGAAGCCCTGGCCATGCGTCTCACCCACCAGCAGAGCAACTGGCTC TTCCGCGCCACGACGGACCAGAAGGCCGAGTCTGGCTGGGAGCAGCTCTTCCCCATCGTCATGCAGAGCGGCCTC GGCGACTTTTGCGAGCCGAGCGTCGCCGCCCCGTCCACGTTCGCCGGCAAGAAGGGCGTCGTGAGCGTCGTTTCC TCGGCCGTCGATGGGTTGCTGTACCAGGTGAGCTCTCTCTTTGTATATGTATCTGAAGCTCGCATACACACTCTT TCCGTGGATTCCCTGGCTCCTCTTCTTGCTGCCACTCGATTACCGTGTGATTCTTAATCAGACGTGTCACTCATT TTACGCCTGCACGGCTTGCAGTGTGTCGCCGTCAACTTCGTTCAAGGCTCCGCCAACCGCGCCCCCCCCGAATGC AAGAACTCGTCCTCGGTCCAGGCCTCCTTCGTCAACGACGACAAGCTCTCGGCCCTGGTGGGCAAGCAGGCATCG GTCTCGGCCTCGTCATCGCGCTCGTCGACGGCCCCATCCGCGGCAGCAACGAGCACCAGCGCGGCTGCATCGAAT CGGCAGCCGACGACGGGCCGTCTTGGATGGAACGCCGGCGCTGCGGCCCTCGTCTCCGGCGCTCTTCTCGGGGGG GCGCTGCTGCTGGCATGA |