© 2023 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Hirsu2|10107 |
| Gene name | |
| Location | Contig_79:14483..15098 |
| Strand | - |
| Gene length (bp) | 615 |
| Transcript length (bp) | 519 |
| Coding sequence length (bp) | 519 |
| Protein length (aa) | 173 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm | 0.5328 | 0.4649 | 0.5219 | 0.0735 | 0.2242 | 0.1751 | 0.1565 | 0.1764 | 0.0973 | 0.0568 |
| Orthofinder run ID | 4 |
| Orthogroup | 8400 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps subramaniannii | Hirsu2|10107 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|10107 MPPRPTRSRLLAASHLLSLSLVRPQHHRSRNGAFGRTASTPSPPSATWTRGASFCSGDDDDERRPLDDDDVDDDD DSRLLPARPTSPSCPPQRPPLLHAALLSLPISPGSRGSRTRETQRYSQGREYACQRTGAPVPPRRAEVPERAPAL RVGPAPSRVESFCPAGGGGSEP* |
| Coding | >Hirsu2|10107 ATGCCTCCCCGACCGACTCGCTCCCGTCTTCTCGCCGCCTCCCATCTTCTCTCTCTCTCTCTCGTCCGACCGCAG CATCATAGGAGCCGCAACGGCGCATTCGGGCGCACAGCTTCGACTCCCTCGCCGCCGTCTGCTACTTGGACGAGG GGCGCCTCCTTTTGCTCCGGCGACGACGACGACGAGCGACGTCCGCTCGACGACGACGACGTCGACGACGACGAC GACTCTCGCCTCCTCCCCGCACGCCCAACATCGCCTTCTTGTCCTCCTCAGCGACCCCCCCTCTTACACGCCGCC CTTCTTTCTTTACCGATATCCCCTGGGTCGCGCGGCAGCCGGACCAGGGAGACGCAGCGGTACAGCCAGGGGAGG GAATATGCATGCCAGCGCACCGGCGCACCGGTGCCGCCTCGCCGCGCTGAAGTACCAGAGCGCGCTCCCGCTCTT CGCGTCGGCCCCGCTCCGTCCCGAGTCGAGTCGTTCTGCCCGGCTGGCGGCGGCGGCAGCGAGCCCTGA |
| Transcript | >Hirsu2|10107 ATGCCTCCCCGACCGACTCGCTCCCGTCTTCTCGCCGCCTCCCATCTTCTCTCTCTCTCTCTCGTCCGACCGCAG CATCATAGGAGCCGCAACGGCGCATTCGGGCGCACAGCTTCGACTCCCTCGCCGCCGTCTGCTACTTGGACGAGG GGCGCCTCCTTTTGCTCCGGCGACGACGACGACGAGCGACGTCCGCTCGACGACGACGACGTCGACGACGACGAC GACTCTCGCCTCCTCCCCGCACGCCCAACATCGCCTTCTTGTCCTCCTCAGCGACCCCCCCTCTTACACGCCGCC CTTCTTTCTTTACCGATATCCCCTGGGTCGCGCGGCAGCCGGACCAGGGAGACGCAGCGGTACAGCCAGGGGAGG GAATATGCATGCCAGCGCACCGGCGCACCGGTGCCGCCTCGCCGCGCTGAAGTACCAGAGCGCGCTCCCGCTCTT CGCGTCGGCCCCGCTCCGTCCCGAGTCGAGTCGTTCTGCCCGGCTGGCGGCGGCGGCAGCGAGCCCTGA |
| Gene | >Hirsu2|10107 ATGCCTCGTGCGCCTTCATCATGACTTGGCCCGCCGAGTTTCCACTCCCGCCTCTTGCCGTCTAGCCCGACCGAC TCGCTCCCGTCTTCTCGCCGCCTCCCATCTTCTCTCTCTCTCTCTCGTCCGACCGCAGCATCATAGGAGCCGCAA CGGCGCATTCGGGCGCACAGCTTCGACTCCCTCGCCGCCGTCTGCTACTTGGACGAGGGGCGCCTCCTTTTGCTC CGGCGACGACGACGACGAGCGACGTCCGCTCGACGACGACGACGTCGACGACGACGACGACTCTCGCCTCCTCCC CGCACGCCCAACATCGCCTTCTTGTCCTCCTCAGCGACCCCCCCTCTTACACGCCGCCCTTCTTTCTTTACCGAT ATCCCCTGGGTCGCGCGGCAGCCGGACCAGGGAGACGCAGCGGTACAGCCAGGGGAGGGAATATGCATGCCAGCG CACCGTGCGACGCCTCACGTCCTTCAGCACACGGATCACCAGGGCGCACCGGTGCCGCCTCGCCGCGCTGAAGTA CCAGAGCGCGCTCCCGCTCTTCGCGTCGGCCCCGCTCCGTCCCGAGTCGAGTCGTTCTGCCCGGCTGGCGGCGGC GGCAGCGAGCCCTGA |