© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|101 |
| Gene name | |
| Location | Contig_1013:9575..9977 |
| Strand | - |
| Gene length (bp) | 402 |
| Transcript length (bp) | 402 |
| Coding sequence length (bp) | 402 |
| Protein length (aa) | 134 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01977 | UbiD | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase | 2.7E-08 | 12 | 65 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|A2QHE5|FDC1_ASPNC | Ferulic acid decarboxylase 1 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=fdc1 PE=1 SV=1 | 1 | 133 | 2.0E-21 |
| sp|Q9I6N5|FDC_PSEAE | UbiD-like decarboxylase OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=hudA PE=1 SV=1 | 17 | 133 | 1.0E-13 |
| sp|B9WJ66|FDC1_CANDC | Ferulic acid decarboxylase 1 OS=Candida dubliniensis (strain CD36 / ATCC MYA-646 / CBS 7987 / NCPF 3949 / NRRL Y-17841) GN=FDC1 PE=1 SV=1 | 7 | 131 | 9.0E-10 |
| sp|Q03034|FDC1_YEAST | Ferulic acid decarboxylase 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FDC1 PE=1 SV=1 | 13 | 133 | 7.0E-09 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016831 | carboxy-lyase activity | Yes |
| GO:0016830 | carbon-carbon lyase activity | No |
| GO:0003824 | catalytic activity | No |
| GO:0016829 | lyase activity | No |
| GO:0003674 | molecular_function | No |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm | 0.6592 | 0.3717 | 0.1165 | 0.1208 | 0.2912 | 0.0331 | 0.2156 | 0.2198 | 0.2995 | 0.0117 |
| Orthofinder run ID | 4 |
| Orthogroup | 6921 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps australis map64 (Brazil) | OphauB2|320 |
| Ophiocordyceps australis map64 (Brazil) | OphauB2|3401 |
| Ophiocordyceps subramaniannii | Hirsu2|101 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|101 LRGRADDAAALSRRAAEALFPSRPGLYLSRLLLVADDVDPTDPADVAWAEATRCQPGAGEFLFHRYPTLPLVPYV GHGVPPAPGRCHAKQVRCCMLPAEFADAPLPWKVASFRGAYPQHVQDKVLRRWSEYGF* |
| Coding | >Hirsu2|101 CTGCGCGGCCGCGCCGACGACGCCGCCGCCCTCAGCCGCCGCGCCGCCGAGGCCCTCTTCCCCTCCCGCCCGGGC CTCTACCTCTCGCGCCTGCTGCTCGTCGCCGACGACGTCGACCCCACCGACCCGGCCGACGTCGCCTGGGCCGAG GCCACCCGCTGCCAGCCCGGCGCCGGCGAGTTCCTCTTCCACCGCTACCCGACCCTGCCGCTCGTCCCCTACGTC GGCCACGGCGTGCCCCCGGCCCCGGGCCGCTGCCACGCCAAGCAGGTCCGCTGCTGCATGCTGCCTGCCGAGTTC GCCGACGCGCCGCTCCCCTGGAAGGTCGCCTCCTTCCGCGGCGCCTATCCGCAGCACGTCCAGGACAAGGTCCTC CGTCGCTGGTCCGAATACGGCTTCTGA |
| Transcript | >Hirsu2|101 CTGCGCGGCCGCGCCGACGACGCCGCCGCCCTCAGCCGCCGCGCCGCCGAGGCCCTCTTCCCCTCCCGCCCGGGC CTCTACCTCTCGCGCCTGCTGCTCGTCGCCGACGACGTCGACCCCACCGACCCGGCCGACGTCGCCTGGGCCGAG GCCACCCGCTGCCAGCCCGGCGCCGGCGAGTTCCTCTTCCACCGCTACCCGACCCTGCCGCTCGTCCCCTACGTC GGCCACGGCGTGCCCCCGGCCCCGGGCCGCTGCCACGCCAAGCAGGTCCGCTGCTGCATGCTGCCTGCCGAGTTC GCCGACGCGCCGCTCCCCTGGAAGGTCGCCTCCTTCCGCGGCGCCTATCCGCAGCACGTCCAGGACAAGGTCCTC CGTCGCTGGTCCGAATACGGCTTCTGA |
| Gene | >Hirsu2|101 CTGCGCGGCCGCGCCGACGACGCCGCCGCCCTCAGCCGCCGCGCCGCCGAGGCCCTCTTCCCCTCCCGCCCGGGC CTCTACCTCTCGCGCCTGCTGCTCGTCGCCGACGACGTCGACCCCACCGACCCGGCCGACGTCGCCTGGGCCGAG GCCACCCGCTGCCAGCCCGGCGCCGGCGAGTTCCTCTTCCACCGCTACCCGACCCTGCCGCTCGTCCCCTACGTC GGCCACGGCGTGCCCCCGGCCCCGGGCCGCTGCCACGCCAAGCAGGTCCGCTGCTGCATGCTGCCTGCCGAGTTC GCCGACGCGCCGCTCCCCTGGAAGGTCGCCTCCTTCCGCGGCGCCTATCCGCAGCACGTCCAGGACAAGGTCCTC CGTCGCTGGTCCGAATACGGCTTCTGA |