© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|10094 |
| Gene name | |
| Location | Contig_788:2991..4088 |
| Strand | + |
| Gene length (bp) | 1097 |
| Transcript length (bp) | 948 |
| Coding sequence length (bp) | 948 |
| Protein length (aa) | 316 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13460 | NAD_binding_10 | NAD(P)H-binding | 3.1E-19 | 6 | 149 |
| PF05368 | NmrA | NmrA-like family | 2.0E-18 | 40 | 233 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P39315|QOR2_ECOLI | Quinone oxidoreductase 2 OS=Escherichia coli (strain K12) GN=qorB PE=1 SV=1 | 1 | 303 | 6.0E-17 |
| sp|Q8KU07|AZOB_XENAZ | NAD(P)H azoreductase OS=Xenophilus azovorans GN=azoB PE=1 SV=2 | 1 | 242 | 9.0E-09 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 13 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|10094 MIVLTGTSGGLGRPALDTLLREHLVPVSELRISTTKPASVPAAVRDSGIEIRKGDLYDPSSLAESYSGADVLFLV SFPSMGPERFALHRNGIDAAKAAGVRHVIYTSLSFAGGAEGSTSVAQVAQAHLRTEAYLKASGLDYTIVRMASYA HLWNNYAGFLRLDADPGLVVDAVLPNDGLEHWASREDLGEAAAKIIANHKEFANKTINLTGPELLTGVDIVHKYM KHSGREVRIRVLPVQEAIEWHVENGSVPPEQVGFLENWASWHTAISLGEKAFLDPTLERLLGRKPKTVDDQADEI FSVAHGLDTKDLVGI* |
| Coding | >Hirsu2|10094 ATGATTGTTCTCACCGGCACAAGTGGCGGCCTGGGCCGGCCAGCGCTCGACACGCTCCTCCGAGAGCATCTGGTG CCGGTCTCGGAGCTCCGGATCTCGACGACGAAGCCGGCCTCGGTCCCGGCCGCGGTGCGCGACAGCGGCATCGAG ATCCGCAAGGGCGACCTGTACGACCCGTCGTCGCTGGCGGAGTCGTACTCGGGCGCCGACGTGCTGTTCCTCGTG TCCTTCCCGTCCATGGGCCCGGAGCGGTTCGCGCTGCACCGCAACGGCATCGACGCGGCCAAGGCGGCCGGCGTC CGGCACGTCATCTACACGTCGCTGTCGTTCGCCGGCGGCGCCGAGGGCAGCACCAGCGTCGCGCAGGTCGCGCAG GCGCACCTGCGCACCGAGGCCTACCTGAAGGCGAGCGGGCTCGACTACACCATCGTGCGGATGGCGTCGTACGCC CACCTGTGGAACAACTACGCCGGCTTCCTCAGGCTGGACGCGGACCCGGGGCTCGTCGTCGACGCCGTCCTGCCC AACGACGGCCTCGAGCACTGGGCGAGCCGGGAAGACCTAGGCGAGGCTGCTGCCAAAATCATTGCGAACCATAAA GAGTTCGCCAACAAGACCATCAACTTGACCGGCCCCGAGCTGTTGACGGGCGTCGACATCGTGCACAAGTACATG AAACACAGCGGTAGGGAGGTCAGGATCCGCGTCCTGCCCGTCCAGGAAGCCATCGAGTGGCACGTCGAGAACGGC AGCGTGCCTCCGGAGCAGGTGGGCTTCCTGGAGAACTGGGCGAGCTGGCACACGGCCATCTCGCTGGGAGAGAAG GCCTTTCTCGACCCTACCCTGGAACGGCTGCTGGGGCGGAAGCCCAAGACGGTCGACGACCAAGCCGACGAGATT TTCTCGGTGGCGCACGGTCTCGACACCAAGGATCTCGTGGGGATTTGA |
| Transcript | >Hirsu2|10094 ATGATTGTTCTCACCGGCACAAGTGGCGGCCTGGGCCGGCCAGCGCTCGACACGCTCCTCCGAGAGCATCTGGTG CCGGTCTCGGAGCTCCGGATCTCGACGACGAAGCCGGCCTCGGTCCCGGCCGCGGTGCGCGACAGCGGCATCGAG ATCCGCAAGGGCGACCTGTACGACCCGTCGTCGCTGGCGGAGTCGTACTCGGGCGCCGACGTGCTGTTCCTCGTG TCCTTCCCGTCCATGGGCCCGGAGCGGTTCGCGCTGCACCGCAACGGCATCGACGCGGCCAAGGCGGCCGGCGTC CGGCACGTCATCTACACGTCGCTGTCGTTCGCCGGCGGCGCCGAGGGCAGCACCAGCGTCGCGCAGGTCGCGCAG GCGCACCTGCGCACCGAGGCCTACCTGAAGGCGAGCGGGCTCGACTACACCATCGTGCGGATGGCGTCGTACGCC CACCTGTGGAACAACTACGCCGGCTTCCTCAGGCTGGACGCGGACCCGGGGCTCGTCGTCGACGCCGTCCTGCCC AACGACGGCCTCGAGCACTGGGCGAGCCGGGAAGACCTAGGCGAGGCTGCTGCCAAAATCATTGCGAACCATAAA GAGTTCGCCAACAAGACCATCAACTTGACCGGCCCCGAGCTGTTGACGGGCGTCGACATCGTGCACAAGTACATG AAACACAGCGGTAGGGAGGTCAGGATCCGCGTCCTGCCCGTCCAGGAAGCCATCGAGTGGCACGTCGAGAACGGC AGCGTGCCTCCGGAGCAGGTGGGCTTCCTGGAGAACTGGGCGAGCTGGCACACGGCCATCTCGCTGGGAGAGAAG GCCTTTCTCGACCCTACCCTGGAACGGCTGCTGGGGCGGAAGCCCAAGACGGTCGACGACCAAGCCGACGAGATT TTCTCGGTGGCGCACGGTCTCGACACCAAGGATCTCGTGGGGATTTGA |
| Gene | >Hirsu2|10094 ATGATTGTTCTCACCGGTATGAAAACCCCAGCCATCGCACGGCAGCTCGATAGCGTCGATGCTGACTCGGTGGGT ACGGATGCAGGCACAAGTGGCGGCCTGGGCCGGCCAGCGCTCGACACGCTCCTCCGAGAGCATCTGGTGCCGGTC TCGGAGCTCCGGATCTCGACGACGAAGCCGGCCTCGGTCCCGGCCGCGGTGCGCGACAGCGGCATCGAGATCCGC AAGGGCGACCTGTACGACCCGTCGTCGCTGGCGGAGTCGTACTCGGGCGCCGACGTGCTGTTCCTCGTGTCCTTC CCGTCCATGGGCCCGGAGCGGTTCGCGCTGCACCGCAACGGCATCGACGCGGCCAAGGCGGCCGGCGTCCGGCAC GTCATCTACACGTCGCTGTCGTTCGCCGGCGGCGCCGAGGGCAGCACCAGCGTCGCGCAGGTCGCGCAGGCGCAC CTGCGCACCGAGGCCTACCTGAAGGCGAGCGGGCTCGACTACACCATCGTGCGGATGGCGTCGTACGCCCACCTG TGGAACAACTACGCCGGCTTCCTCAGGCTGGACGCGGACCCGGGGCTCGTCGTCGACGCCGTCCTGCCCAACGAC GGCCTCGAGCACTGGGCGAGCCGGGAAGACCTAGGCGAGGCTGCTGCCAAAATCATTGCGAACCATGTACGTCTG CTCGTTATGTCCACCTCTGGGACCCGGCTCGGGATAGGTATAAGGGAACTGACTGCCTGCCGCGCGAGTAGAAAG AGTTCGCCAACAAGACCATCAACTTGACCGGCCCCGAGCTGTTGACGGGCGTCGACATCGTGCACAAGTACATGA AACACAGCGGTAGGGAGGTCAGGATCCGCGTCCTGCCCGTCCAGGAAGCCATCGAGTGGCACGTCGAGAACGGCA GCGTGCCTCCGGAGCAGGTGGGCTTCCTGGAGAACTGGGCGAGCTGGCACACGGCCATCTCGCTGGGAGAGAAGG CCTTTCTCGACCCTACCCTGGAACGGCTGCTGGGGCGGAAGCCCAAGACGGTCGACGACCAAGCCGACGAGATTT TCTCGGTGGCGCACGGTCTCGACACCAAGGATCTCGTGGGGATTTGA |