Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|1008
Gene name
LocationContig_1209:778..1192
Strand-
Gene length (bp)414
Transcript length (bp)414
Coding sequence length (bp)414
Protein length (aa) 138

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm|Nucleus 0.6274 0.5537 0.28 0.1144 0.1729 0.0358 0.1002 0.1593 0.182 0.0281

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup8395
Change Orthofinder run
Species Protein ID
Ophiocordyceps subramaniannii Hirsu2|1008 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|1008
MPYELVSDYHTGEAAGQTCEKQAEASTSKQRGGREPLDGCQHALSAFSRSKFDGATTRVRQWSGAAADGDNHMPP
DWQGSPRRSTRTAPLADALHHSSVRTESSSSWDREGPFGQFLEMGDGGPLEDFDVRPGKADA*
Coding >Hirsu2|1008
ATGCCGTACGAGTTAGTAAGCGACTACCACACCGGCGAGGCTGCTGGCCAGACATGTGAAAAGCAGGCCGAGGCG
AGCACGTCGAAACAGCGTGGAGGCCGCGAGCCCCTTGACGGATGTCAGCATGCGTTATCGGCGTTCTCGAGGTCG
AAATTCGACGGAGCTACGACCAGGGTCCGGCAGTGGAGCGGAGCGGCGGCCGATGGAGATAATCACATGCCGCCC
GATTGGCAGGGTAGCCCGAGGAGGTCGACGAGGACGGCGCCATTGGCAGATGCGCTCCACCACAGCTCCGTCCGG
ACGGAGAGTAGCTCGTCTTGGGATCGAGAGGGTCCTTTTGGGCAGTTTCTGGAGATGGGCGACGGGGGACCCCTG
GAGGATTTTGACGTCAGGCCGGGCAAGGCAGATGCATGA
Transcript >Hirsu2|1008
ATGCCGTACGAGTTAGTAAGCGACTACCACACCGGCGAGGCTGCTGGCCAGACATGTGAAAAGCAGGCCGAGGCG
AGCACGTCGAAACAGCGTGGAGGCCGCGAGCCCCTTGACGGATGTCAGCATGCGTTATCGGCGTTCTCGAGGTCG
AAATTCGACGGAGCTACGACCAGGGTCCGGCAGTGGAGCGGAGCGGCGGCCGATGGAGATAATCACATGCCGCCC
GATTGGCAGGGTAGCCCGAGGAGGTCGACGAGGACGGCGCCATTGGCAGATGCGCTCCACCACAGCTCCGTCCGG
ACGGAGAGTAGCTCGTCTTGGGATCGAGAGGGTCCTTTTGGGCAGTTTCTGGAGATGGGCGACGGGGGACCCCTG
GAGGATTTTGACGTCAGGCCGGGCAAGGCAGATGCATGA
Gene >Hirsu2|1008
ATGCCGTACGAGTTAGTAAGCGACTACCACACCGGCGAGGCTGCTGGCCAGACATGTGAAAAGCAGGCCGAGGCG
AGCACGTCGAAACAGCGTGGAGGCCGCGAGCCCCTTGACGGATGTCAGCATGCGTTATCGGCGTTCTCGAGGTCG
AAATTCGACGGAGCTACGACCAGGGTCCGGCAGTGGAGCGGAGCGGCGGCCGATGGAGATAATCACATGCCGCCC
GATTGGCAGGGTAGCCCGAGGAGGTCGACGAGGACGGCGCCATTGGCAGATGCGCTCCACCACAGCTCCGTCCGG
ACGGAGAGTAGCTCGTCTTGGGATCGAGAGGGTCCTTTTGGGCAGTTTCTGGAGATGGGCGACGGGGGACCCCTG
GAGGATTTTGACGTCAGGCCGGGCAAGGCAGATGCATGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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