Protein ID | Hirsu2|10069 |
Gene name | |
Location | Contig_783:3516..4671 |
Strand | - |
Gene length (bp) | 1155 |
Transcript length (bp) | 1155 |
Coding sequence length (bp) | 1155 |
Protein length (aa) | 385 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF13324 | GCIP | Grap2 and cyclin-D-interacting | 1.6E-21 | 62 | 341 |
PF14246 | TetR_C_7 | AefR-like transcriptional repressor, C-terminal domain | 2.1E-05 | 311 | 373 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q10368|YDBI_SCHPO | Uncharacterized protein C22E12.18 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC22E12.18 PE=1 SV=1 | 57 | 374 | 3.0E-12 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Cytoplasm|Nucleus | Nuclear export signal | 0.5992 | 0.6003 | 0.0892 | 0.1437 | 0.0449 | 0.0036 | 0.1046 | 0.1684 | 0.214 | 0.0129 |
Orthofinder run ID | 4 |
Orthogroup | 4769 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|10069 MSPPPSADSLQRLDALVQTASALLAQLQSALSEIQKDPSQGPPAPSDASAANPPDALALAHDSASLIRAQGTKVS LLIINEPLTPSAICSVVGELVSGPVPAIVSAAQICHPAQYSVVLRRELALLSRRVLAELNELLKKIPKDGKVLSG LAHAGSDSGKKGSIQVTGILWSACDDLIKLTKMGAGGLLAEKTRQWGDMLKDISEELKEWGEESSEDGDDGSGED DDVDDLVGQLGDAHVSAQDMIDDLMNSHSSIPRHDPDRIRPRLDATLKRLRLVALLYEAARARRFSKLPALPPAA AGSDVPSRLDELARLLQRLPERFEDLAGAFYELQPADIDAAMDQCLVDAVAAGELLANDWNGAADAFTQWITRFR AEMKMPDGL* |
Coding | >Hirsu2|10069 ATGTCGCCTCCGCCGTCCGCAGACTCGCTCCAAAGGCTGGACGCCCTGGTCCAAACAGCCTCTGCCCTCCTCGCG CAGCTGCAGAGCGCCCTGTCCGAGATACAAAAAGATCCGTCGCAAGGACCACCAGCGCCGTCAGACGCGTCTGCG GCCAATCCACCTGATGCCTTGGCCCTCGCTCACGACTCGGCCTCGCTCATCAGAGCGCAGGGGACCAAGGTCTCG CTGCTCATCATCAACGAACCTCTGACCCCCAGCGCCATCTGTTCCGTCGTCGGCGAGCTGGTGTCCGGGCCGGTG CCTGCCATTGTCTCTGCGGCCCAGATATGCCATCCTGCACAGTACAGCGTCGTGCTTCGGCGCGAGTTGGCTCTG CTAAGCCGCCGGGTCCTCGCCGAGCTGAACGAGCTTCTCAAGAAGATACCAAAGGACGGCAAGGTCCTGTCCGGC CTTGCACACGCGGGCTCCGACTCCGGCAAGAAAGGCAGCATTCAGGTCACCGGTATCCTCTGGTCCGCCTGCGAC GACCTAATCAAGCTCACCAAGATGGGCGCGGGCGGCCTGCTTGCCGAGAAGACGAGGCAGTGGGGGGATATGCTG AAAGACATCTCCGAAGAGCTCAAGGAATGGGGTGAAGAATCATCAGAGGACGGCGACGACGGGTCGGGCGAGGAC GACGACGTGGACGACTTGGTCGGCCAACTGGGGGACGCTCACGTCTCCGCCCAGGACATGATCGACGACTTGATG AACTCGCATAGCTCCATTCCACGCCATGACCCCGATCGCATACGGCCGCGCCTGGACGCCACGCTCAAGCGCCTT CGCCTCGTCGCTCTCTTGTACGAAGCCGCCCGGGCTCGCCGCTTCAGCAAGCTTCCCGCGCTGCCCCCCGCCGCG GCGGGATCCGACGTGCCGTCCCGACTGGATGAACTGGCGCGTCTTCTGCAGAGGCTGCCCGAACGATTTGAGGAT CTGGCCGGTGCCTTTTACGAGCTGCAGCCCGCCGATATTGACGCGGCCATGGATCAGTGTCTTGTCGACGCCGTG GCCGCGGGCGAGCTGCTGGCCAACGACTGGAACGGCGCGGCCGATGCCTTTACACAGTGGATTACGCGGTTCCGG GCGGAAATGAAGATGCCTGACGGACTATGA |
Transcript | >Hirsu2|10069 ATGTCGCCTCCGCCGTCCGCAGACTCGCTCCAAAGGCTGGACGCCCTGGTCCAAACAGCCTCTGCCCTCCTCGCG CAGCTGCAGAGCGCCCTGTCCGAGATACAAAAAGATCCGTCGCAAGGACCACCAGCGCCGTCAGACGCGTCTGCG GCCAATCCACCTGATGCCTTGGCCCTCGCTCACGACTCGGCCTCGCTCATCAGAGCGCAGGGGACCAAGGTCTCG CTGCTCATCATCAACGAACCTCTGACCCCCAGCGCCATCTGTTCCGTCGTCGGCGAGCTGGTGTCCGGGCCGGTG CCTGCCATTGTCTCTGCGGCCCAGATATGCCATCCTGCACAGTACAGCGTCGTGCTTCGGCGCGAGTTGGCTCTG CTAAGCCGCCGGGTCCTCGCCGAGCTGAACGAGCTTCTCAAGAAGATACCAAAGGACGGCAAGGTCCTGTCCGGC CTTGCACACGCGGGCTCCGACTCCGGCAAGAAAGGCAGCATTCAGGTCACCGGTATCCTCTGGTCCGCCTGCGAC GACCTAATCAAGCTCACCAAGATGGGCGCGGGCGGCCTGCTTGCCGAGAAGACGAGGCAGTGGGGGGATATGCTG AAAGACATCTCCGAAGAGCTCAAGGAATGGGGTGAAGAATCATCAGAGGACGGCGACGACGGGTCGGGCGAGGAC GACGACGTGGACGACTTGGTCGGCCAACTGGGGGACGCTCACGTCTCCGCCCAGGACATGATCGACGACTTGATG AACTCGCATAGCTCCATTCCACGCCATGACCCCGATCGCATACGGCCGCGCCTGGACGCCACGCTCAAGCGCCTT CGCCTCGTCGCTCTCTTGTACGAAGCCGCCCGGGCTCGCCGCTTCAGCAAGCTTCCCGCGCTGCCCCCCGCCGCG GCGGGATCCGACGTGCCGTCCCGACTGGATGAACTGGCGCGTCTTCTGCAGAGGCTGCCCGAACGATTTGAGGAT CTGGCCGGTGCCTTTTACGAGCTGCAGCCCGCCGATATTGACGCGGCCATGGATCAGTGTCTTGTCGACGCCGTG GCCGCGGGCGAGCTGCTGGCCAACGACTGGAACGGCGCGGCCGATGCCTTTACACAGTGGATTACGCGGTTCCGG GCGGAAATGAAGATGCCTGACGGACTATGA |
Gene | >Hirsu2|10069 ATGTCGCCTCCGCCGTCCGCAGACTCGCTCCAAAGGCTGGACGCCCTGGTCCAAACAGCCTCTGCCCTCCTCGCG CAGCTGCAGAGCGCCCTGTCCGAGATACAAAAAGATCCGTCGCAAGGACCACCAGCGCCGTCAGACGCGTCTGCG GCCAATCCACCTGATGCCTTGGCCCTCGCTCACGACTCGGCCTCGCTCATCAGAGCGCAGGGGACCAAGGTCTCG CTGCTCATCATCAACGAACCTCTGACCCCCAGCGCCATCTGTTCCGTCGTCGGCGAGCTGGTGTCCGGGCCGGTG CCTGCCATTGTCTCTGCGGCCCAGATATGCCATCCTGCACAGTACAGCGTCGTGCTTCGGCGCGAGTTGGCTCTG CTAAGCCGCCGGGTCCTCGCCGAGCTGAACGAGCTTCTCAAGAAGATACCAAAGGACGGCAAGGTCCTGTCCGGC CTTGCACACGCGGGCTCCGACTCCGGCAAGAAAGGCAGCATTCAGGTCACCGGTATCCTCTGGTCCGCCTGCGAC GACCTAATCAAGCTCACCAAGATGGGCGCGGGCGGCCTGCTTGCCGAGAAGACGAGGCAGTGGGGGGATATGCTG AAAGACATCTCCGAAGAGCTCAAGGAATGGGGTGAAGAATCATCAGAGGACGGCGACGACGGGTCGGGCGAGGAC GACGACGTGGACGACTTGGTCGGCCAACTGGGGGACGCTCACGTCTCCGCCCAGGACATGATCGACGACTTGATG AACTCGCATAGCTCCATTCCACGCCATGACCCCGATCGCATACGGCCGCGCCTGGACGCCACGCTCAAGCGCCTT CGCCTCGTCGCTCTCTTGTACGAAGCCGCCCGGGCTCGCCGCTTCAGCAAGCTTCCCGCGCTGCCCCCCGCCGCG GCGGGATCCGACGTGCCGTCCCGACTGGATGAACTGGCGCGTCTTCTGCAGAGGCTGCCCGAACGATTTGAGGAT CTGGCCGGTGCCTTTTACGAGCTGCAGCCCGCCGATATTGACGCGGCCATGGATCAGTGTCTTGTCGACGCCGTG GCCGCGGGCGAGCTGCTGGCCAACGACTGGAACGGCGCGGCCGATGCCTTTACACAGTGGATTACGCGGTTCCGG GCGGAAATGAAGATGCCTGACGGACTATGA |