Fungal Genomics

at Utrecht University

General Properties

Protein ID	Hirsu2\|10069
Gene name
Location	Contig_783:3516..4671
Strand	-
Gene length (bp)	1155
Transcript length (bp)	1155
Coding sequence length (bp)	1155
Protein length (aa)	385

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF13324	GCIP	Grap2 and cyclin-D-interacting	1.6E-21	62	341
PF14246	TetR_C_7	AefR-like transcriptional repressor, C-terminal domain	2.1E-05	311	373

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q10368\|YDBI_SCHPO	Uncharacterized protein C22E12.18 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC22E12.18 PE=1 SV=1	57	374	3.0E-12

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 33	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2\|10069 MSPPPSADSLQRLDALVQTASALLAQLQSALSEIQKDPSQGPPAPSDASAANPPDALALAHDSASLIRAQGTKVS LLIINEPLTPSAICSVVGELVSGPVPAIVSAAQICHPAQYSVVLRRELALLSRRVLAELNELLKKIPKDGKVLSG LAHAGSDSGKKGSIQVTGILWSACDDLIKLTKMGAGGLLAEKTRQWGDMLKDISEELKEWGEESSEDGDDGSGED DDVDDLVGQLGDAHVSAQDMIDDLMNSHSSIPRHDPDRIRPRLDATLKRLRLVALLYEAARARRFSKLPALPPAA AGSDVPSRLDELARLLQRLPERFEDLAGAFYELQPADIDAAMDQCLVDAVAAGELLANDWNGAADAFTQWITRFR AEMKMPDGL*
Coding	>Hirsu2\|10069 ATGTCGCCTCCGCCGTCCGCAGACTCGCTCCAAAGGCTGGACGCCCTGGTCCAAACAGCCTCTGCCCTCCTCGCG CAGCTGCAGAGCGCCCTGTCCGAGATACAAAAAGATCCGTCGCAAGGACCACCAGCGCCGTCAGACGCGTCTGCG GCCAATCCACCTGATGCCTTGGCCCTCGCTCACGACTCGGCCTCGCTCATCAGAGCGCAGGGGACCAAGGTCTCG CTGCTCATCATCAACGAACCTCTGACCCCCAGCGCCATCTGTTCCGTCGTCGGCGAGCTGGTGTCCGGGCCGGTG CCTGCCATTGTCTCTGCGGCCCAGATATGCCATCCTGCACAGTACAGCGTCGTGCTTCGGCGCGAGTTGGCTCTG CTAAGCCGCCGGGTCCTCGCCGAGCTGAACGAGCTTCTCAAGAAGATACCAAAGGACGGCAAGGTCCTGTCCGGC CTTGCACACGCGGGCTCCGACTCCGGCAAGAAAGGCAGCATTCAGGTCACCGGTATCCTCTGGTCCGCCTGCGAC GACCTAATCAAGCTCACCAAGATGGGCGCGGGCGGCCTGCTTGCCGAGAAGACGAGGCAGTGGGGGGATATGCTG AAAGACATCTCCGAAGAGCTCAAGGAATGGGGTGAAGAATCATCAGAGGACGGCGACGACGGGTCGGGCGAGGAC GACGACGTGGACGACTTGGTCGGCCAACTGGGGGACGCTCACGTCTCCGCCCAGGACATGATCGACGACTTGATG AACTCGCATAGCTCCATTCCACGCCATGACCCCGATCGCATACGGCCGCGCCTGGACGCCACGCTCAAGCGCCTT CGCCTCGTCGCTCTCTTGTACGAAGCCGCCCGGGCTCGCCGCTTCAGCAAGCTTCCCGCGCTGCCCCCCGCCGCG GCGGGATCCGACGTGCCGTCCCGACTGGATGAACTGGCGCGTCTTCTGCAGAGGCTGCCCGAACGATTTGAGGAT CTGGCCGGTGCCTTTTACGAGCTGCAGCCCGCCGATATTGACGCGGCCATGGATCAGTGTCTTGTCGACGCCGTG GCCGCGGGCGAGCTGCTGGCCAACGACTGGAACGGCGCGGCCGATGCCTTTACACAGTGGATTACGCGGTTCCGG GCGGAAATGAAGATGCCTGACGGACTATGA
Transcript	>Hirsu2\|10069 ATGTCGCCTCCGCCGTCCGCAGACTCGCTCCAAAGGCTGGACGCCCTGGTCCAAACAGCCTCTGCCCTCCTCGCG CAGCTGCAGAGCGCCCTGTCCGAGATACAAAAAGATCCGTCGCAAGGACCACCAGCGCCGTCAGACGCGTCTGCG GCCAATCCACCTGATGCCTTGGCCCTCGCTCACGACTCGGCCTCGCTCATCAGAGCGCAGGGGACCAAGGTCTCG CTGCTCATCATCAACGAACCTCTGACCCCCAGCGCCATCTGTTCCGTCGTCGGCGAGCTGGTGTCCGGGCCGGTG CCTGCCATTGTCTCTGCGGCCCAGATATGCCATCCTGCACAGTACAGCGTCGTGCTTCGGCGCGAGTTGGCTCTG CTAAGCCGCCGGGTCCTCGCCGAGCTGAACGAGCTTCTCAAGAAGATACCAAAGGACGGCAAGGTCCTGTCCGGC CTTGCACACGCGGGCTCCGACTCCGGCAAGAAAGGCAGCATTCAGGTCACCGGTATCCTCTGGTCCGCCTGCGAC GACCTAATCAAGCTCACCAAGATGGGCGCGGGCGGCCTGCTTGCCGAGAAGACGAGGCAGTGGGGGGATATGCTG AAAGACATCTCCGAAGAGCTCAAGGAATGGGGTGAAGAATCATCAGAGGACGGCGACGACGGGTCGGGCGAGGAC GACGACGTGGACGACTTGGTCGGCCAACTGGGGGACGCTCACGTCTCCGCCCAGGACATGATCGACGACTTGATG AACTCGCATAGCTCCATTCCACGCCATGACCCCGATCGCATACGGCCGCGCCTGGACGCCACGCTCAAGCGCCTT CGCCTCGTCGCTCTCTTGTACGAAGCCGCCCGGGCTCGCCGCTTCAGCAAGCTTCCCGCGCTGCCCCCCGCCGCG GCGGGATCCGACGTGCCGTCCCGACTGGATGAACTGGCGCGTCTTCTGCAGAGGCTGCCCGAACGATTTGAGGAT CTGGCCGGTGCCTTTTACGAGCTGCAGCCCGCCGATATTGACGCGGCCATGGATCAGTGTCTTGTCGACGCCGTG GCCGCGGGCGAGCTGCTGGCCAACGACTGGAACGGCGCGGCCGATGCCTTTACACAGTGGATTACGCGGTTCCGG GCGGAAATGAAGATGCCTGACGGACTATGA
Gene	>Hirsu2\|10069 ATGTCGCCTCCGCCGTCCGCAGACTCGCTCCAAAGGCTGGACGCCCTGGTCCAAACAGCCTCTGCCCTCCTCGCG CAGCTGCAGAGCGCCCTGTCCGAGATACAAAAAGATCCGTCGCAAGGACCACCAGCGCCGTCAGACGCGTCTGCG GCCAATCCACCTGATGCCTTGGCCCTCGCTCACGACTCGGCCTCGCTCATCAGAGCGCAGGGGACCAAGGTCTCG CTGCTCATCATCAACGAACCTCTGACCCCCAGCGCCATCTGTTCCGTCGTCGGCGAGCTGGTGTCCGGGCCGGTG CCTGCCATTGTCTCTGCGGCCCAGATATGCCATCCTGCACAGTACAGCGTCGTGCTTCGGCGCGAGTTGGCTCTG CTAAGCCGCCGGGTCCTCGCCGAGCTGAACGAGCTTCTCAAGAAGATACCAAAGGACGGCAAGGTCCTGTCCGGC CTTGCACACGCGGGCTCCGACTCCGGCAAGAAAGGCAGCATTCAGGTCACCGGTATCCTCTGGTCCGCCTGCGAC GACCTAATCAAGCTCACCAAGATGGGCGCGGGCGGCCTGCTTGCCGAGAAGACGAGGCAGTGGGGGGATATGCTG AAAGACATCTCCGAAGAGCTCAAGGAATGGGGTGAAGAATCATCAGAGGACGGCGACGACGGGTCGGGCGAGGAC GACGACGTGGACGACTTGGTCGGCCAACTGGGGGACGCTCACGTCTCCGCCCAGGACATGATCGACGACTTGATG AACTCGCATAGCTCCATTCCACGCCATGACCCCGATCGCATACGGCCGCGCCTGGACGCCACGCTCAAGCGCCTT CGCCTCGTCGCTCTCTTGTACGAAGCCGCCCGGGCTCGCCGCTTCAGCAAGCTTCCCGCGCTGCCCCCCGCCGCG GCGGGATCCGACGTGCCGTCCCGACTGGATGAACTGGCGCGTCTTCTGCAGAGGCTGCCCGAACGATTTGAGGAT CTGGCCGGTGCCTTTTACGAGCTGCAGCCCGCCGATATTGACGCGGCCATGGATCAGTGTCTTGTCGACGCCGTG GCCGCGGGCGAGCTGCTGGCCAACGACTGGAACGGCGCGGCCGATGCCTTTACACAGTGGATTACGCGGTTCCGG GCGGAAATGAAGATGCCTGACGGACTATGA

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