Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|10065
Gene name
LocationContig_781:8607..10675
Strand-
Gene length (bp)2068
Transcript length (bp)1977
Coding sequence length (bp)1977
Protein length (aa) 659

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01544 CorA CorA-like Mg2+ transporter protein 4.2E-25 408 625

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q9WZ31|CORA_THEMA Magnesium transport protein CorA OS=Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) GN=corA PE=1 SV=1 380 625 2.0E-16
sp|Q9WZ31|CORA_THEMA Magnesium transport protein CorA OS=Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) GN=corA PE=1 SV=1 140 354 7.0E-09
sp|O31543|YFJQ_BACSU Putative metal ion transporter YfjQ OS=Bacillus subtilis (strain 168) GN=yfjQ PE=3 SV=1 525 632 2.0E-08

GO

GO Term Description Terminal node
GO:0046873 metal ion transmembrane transporter activity Yes
GO:0030001 metal ion transport Yes
GO:0055085 transmembrane transport Yes
GO:0016020 membrane Yes
GO:0008324 cation transmembrane transporter activity No
GO:0008150 biological_process No
GO:0022890 inorganic cation transmembrane transporter activity No
GO:0006811 ion transport No
GO:0015318 inorganic molecular entity transmembrane transporter activity No
GO:0015075 ion transmembrane transporter activity No
GO:0006812 cation transport No
GO:0006810 transport No
GO:0051179 localization No
GO:0003674 molecular_function No
GO:0051234 establishment of localization No
GO:0022857 transmembrane transporter activity No
GO:0005575 cellular_component No
GO:0005215 transporter activity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 50 0.45

Transmembrane Domains

Domain # Start End Length
1 571 593 22
2 606 628 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|10065
MASPAASPLGGGHRQAQAASPSPAPSPAPAQQHHHHHRPHRRHLDRNVRKGGASHSDSAVHRVAAALVSSPPMPA
SSPFVLSRRRSSQAVGSPAAGLFRTIVDDGDDLIDDDGDEDDGAATDPPGSGWQPGSEPGYDPELPDGGHASVPA
LSAPCDITVVDFSLDRVVQRRFDNESFIAFLDQPKDDWAQCRWINVNGLSWDVIQAIGSKKGLHKLALEDVMNMR
NRTKADWYPNHAFIVLTLQKLVHVVDADAAAAEADADAAPPPRSGSADVLRTVFGRLPARVRNLFRRKRRRNVPA
TPRADAAADEDDAGSAVAGQLEKGSPSSPPSPEHQHRHRPAEAGETLMLRSLQRYHASGNEARTAYMEKESPLAR
YNMAVSAEQVSIFLTNDNTAVSFFEMSAADVERPIVTRLSTHGTVLRESSDASMLVQAILDAIVDLAIPLTTVYS
DLLGDLELDVLTAPSIRQSRSLYIFISEINKMVRFLQPIDNLVSVMRDHRTALAPDRAARELANPASGVIITPIT
HTYLGDVLDHCIIITEALQQLKQSSEDLISLIFNTISANQNESMRQLTTVTIIFLPLTFITGFFGQNFSEKYFPE
IHNGIWYFWACAVPTAVATILILMFDMIRAWFVRLFRRKQILSIRRKARSSRRRRKQQ*
Coding >Hirsu2|10065
ATGGCCTCGCCCGCTGCCTCGCCCCTTGGGGGCGGCCATCGTCAAGCTCAGGCAGCTTCTCCTTCTCCTGCGCCG
TCGCCGGCGCCTGCTCAACAGCACCACCATCACCATCGTCCCCATCGCCGGCACCTGGACCGCAACGTCCGTAAG
GGCGGCGCCTCGCACTCGGACTCGGCCGTGCACCGCGTCGCCGCAGCGCTCGTGTCGTCGCCTCCGATGCCGGCC
TCGTCGCCCTTCGTCCTGTCCCGCCGGCGGAGCAGCCAGGCGGTCGGCTCGCCGGCGGCCGGCCTGTTCCGGACC
ATCGTCGACGACGGCGACGACCTCATCGACGACGACGGCGACGAGGATGACGGCGCGGCGACGGATCCGCCCGGC
TCCGGCTGGCAGCCCGGCTCCGAGCCCGGCTACGACCCGGAGCTGCCCGACGGCGGGCACGCGTCCGTGCCGGCG
CTCAGCGCGCCCTGCGACATCACCGTCGTCGACTTCTCGCTCGACCGCGTCGTCCAGCGCCGCTTCGACAACGAG
TCCTTCATCGCCTTCCTCGACCAGCCCAAGGACGACTGGGCCCAGTGCCGGTGGATCAACGTCAACGGCCTCAGC
TGGGACGTCATCCAGGCCATCGGCTCCAAGAAGGGGTTGCACAAGCTCGCGCTCGAGGACGTCATGAACATGCGC
AACCGCACCAAGGCCGACTGGTACCCGAACCACGCCTTCATCGTCCTGACGCTGCAGAAGCTCGTCCACGTCGTC
GATGCCGACGCCGCCGCCGCCGAGGCGGACGCGGACGCCGCCCCGCCGCCCCGATCCGGCTCCGCCGACGTGCTC
CGGACCGTGTTTGGCCGGCTGCCCGCCCGTGTTCGGAACCTCTTCCGCCGCAAAAGGCGGCGCAACGTCCCGGCG
ACGCCCCGGGCCGACGCCGCCGCCGACGAGGACGACGCCGGCAGTGCGGTCGCCGGCCAGCTGGAAAAGGGCTCT
CCCTCTTCTCCTCCCTCCCCCGAGCACCAGCACCGCCATCGGCCGGCCGAGGCCGGCGAGACGTTGATGCTGCGC
TCCCTCCAGCGCTACCACGCCTCCGGCAACGAGGCCCGCACGGCCTACATGGAGAAGGAGTCGCCGCTGGCGCGC
TACAACATGGCCGTCTCGGCCGAGCAGGTGTCCATCTTCCTGACCAACGACAACACGGCCGTCTCCTTCTTCGAG
ATGTCGGCCGCCGACGTCGAGCGGCCGATCGTGACGCGCCTCAGCACCCACGGCACCGTCCTGCGCGAGTCGTCC
GACGCCTCGATGCTGGTCCAGGCCATCCTCGACGCCATCGTCGACCTGGCCATCCCCCTGACGACCGTCTACTCC
GACCTGCTGGGCGACCTCGAGCTCGACGTGCTGACGGCGCCCTCGATCCGCCAGAGCCGCTCGCTCTACATCTTC
ATCTCCGAGATCAACAAGATGGTCCGCTTCCTGCAGCCCATCGACAACCTCGTCAGCGTCATGCGCGACCACCGC
ACCGCCCTGGCCCCGGACCGGGCCGCCCGCGAGCTCGCCAACCCGGCCTCGGGCGTCATCATCACCCCCATCACC
CACACCTACCTCGGCGACGTCCTCGACCACTGCATCATCATCACCGAGGCCCTGCAGCAGCTGAAGCAGTCGAGC
GAGGACCTCATCAGCCTCATCTTCAACACCATCTCCGCCAACCAGAACGAGTCCATGCGCCAGCTCACCACCGTC
ACCATCATCTTCCTGCCCCTGACCTTCATCACCGGCTTCTTCGGCCAAAACTTTTCCGAAAAGTACTTTCCCGAG
ATTCACAACGGCATCTGGTACTTCTGGGCCTGTGCCGTGCCCACCGCCGTGGCCACCATCCTCATCCTCATGTTC
GACATGATCCGGGCCTGGTTCGTCCGCCTGTTCCGCAGAAAACAAATCCTCAGCATTCGCCGAAAGGCGAGGTCC
AGCCGCCGCCGGCGGAAGCAACAGTGA
Transcript >Hirsu2|10065
ATGGCCTCGCCCGCTGCCTCGCCCCTTGGGGGCGGCCATCGTCAAGCTCAGGCAGCTTCTCCTTCTCCTGCGCCG
TCGCCGGCGCCTGCTCAACAGCACCACCATCACCATCGTCCCCATCGCCGGCACCTGGACCGCAACGTCCGTAAG
GGCGGCGCCTCGCACTCGGACTCGGCCGTGCACCGCGTCGCCGCAGCGCTCGTGTCGTCGCCTCCGATGCCGGCC
TCGTCGCCCTTCGTCCTGTCCCGCCGGCGGAGCAGCCAGGCGGTCGGCTCGCCGGCGGCCGGCCTGTTCCGGACC
ATCGTCGACGACGGCGACGACCTCATCGACGACGACGGCGACGAGGATGACGGCGCGGCGACGGATCCGCCCGGC
TCCGGCTGGCAGCCCGGCTCCGAGCCCGGCTACGACCCGGAGCTGCCCGACGGCGGGCACGCGTCCGTGCCGGCG
CTCAGCGCGCCCTGCGACATCACCGTCGTCGACTTCTCGCTCGACCGCGTCGTCCAGCGCCGCTTCGACAACGAG
TCCTTCATCGCCTTCCTCGACCAGCCCAAGGACGACTGGGCCCAGTGCCGGTGGATCAACGTCAACGGCCTCAGC
TGGGACGTCATCCAGGCCATCGGCTCCAAGAAGGGGTTGCACAAGCTCGCGCTCGAGGACGTCATGAACATGCGC
AACCGCACCAAGGCCGACTGGTACCCGAACCACGCCTTCATCGTCCTGACGCTGCAGAAGCTCGTCCACGTCGTC
GATGCCGACGCCGCCGCCGCCGAGGCGGACGCGGACGCCGCCCCGCCGCCCCGATCCGGCTCCGCCGACGTGCTC
CGGACCGTGTTTGGCCGGCTGCCCGCCCGTGTTCGGAACCTCTTCCGCCGCAAAAGGCGGCGCAACGTCCCGGCG
ACGCCCCGGGCCGACGCCGCCGCCGACGAGGACGACGCCGGCAGTGCGGTCGCCGGCCAGCTGGAAAAGGGCTCT
CCCTCTTCTCCTCCCTCCCCCGAGCACCAGCACCGCCATCGGCCGGCCGAGGCCGGCGAGACGTTGATGCTGCGC
TCCCTCCAGCGCTACCACGCCTCCGGCAACGAGGCCCGCACGGCCTACATGGAGAAGGAGTCGCCGCTGGCGCGC
TACAACATGGCCGTCTCGGCCGAGCAGGTGTCCATCTTCCTGACCAACGACAACACGGCCGTCTCCTTCTTCGAG
ATGTCGGCCGCCGACGTCGAGCGGCCGATCGTGACGCGCCTCAGCACCCACGGCACCGTCCTGCGCGAGTCGTCC
GACGCCTCGATGCTGGTCCAGGCCATCCTCGACGCCATCGTCGACCTGGCCATCCCCCTGACGACCGTCTACTCC
GACCTGCTGGGCGACCTCGAGCTCGACGTGCTGACGGCGCCCTCGATCCGCCAGAGCCGCTCGCTCTACATCTTC
ATCTCCGAGATCAACAAGATGGTCCGCTTCCTGCAGCCCATCGACAACCTCGTCAGCGTCATGCGCGACCACCGC
ACCGCCCTGGCCCCGGACCGGGCCGCCCGCGAGCTCGCCAACCCGGCCTCGGGCGTCATCATCACCCCCATCACC
CACACCTACCTCGGCGACGTCCTCGACCACTGCATCATCATCACCGAGGCCCTGCAGCAGCTGAAGCAGTCGAGC
GAGGACCTCATCAGCCTCATCTTCAACACCATCTCCGCCAACCAGAACGAGTCCATGCGCCAGCTCACCACCGTC
ACCATCATCTTCCTGCCCCTGACCTTCATCACCGGCTTCTTCGGCCAAAACTTTTCCGAAAAGTACTTTCCCGAG
ATTCACAACGGCATCTGGTACTTCTGGGCCTGTGCCGTGCCCACCGCCGTGGCCACCATCCTCATCCTCATGTTC
GACATGATCCGGGCCTGGTTCGTCCGCCTGTTCCGCAGAAAACAAATCCTCAGCATTCGCCGAAAGGCGAGGTCC
AGCCGCCGCCGGCGGAAGCAACAGTGA
Gene >Hirsu2|10065
ATGGCCTCGCCCGCTGCCTCGCCCCTTGGGGGCGGCCATCGTCAAGCTCAGGCAGCTTCTCCTTCTCCTGCGCCG
TCGCCGGCGCCTGCTCAACAGCACCACCATCACCATCGTCCCCATCGCCGGCACCTGGACCGCAACGTCCGTAAG
GGCGGCGCCTCGCACTCGGACTCGGCCGTGCACCGCGTCGCCGCAGCGCTCGTGTCGTCGCCTCCGATGCCGGCC
TCGTCGCCCTTCGTCCTGTCCCGCCGGCGGAGCAGCCAGGCGGTCGGCTCGCCGGCGGCCGGCCTGTTCCGGACC
ATCGTCGACGACGGCGACGACCTCATCGACGACGACGGCGACGAGGATGACGGCGCGGCGACGGATCCGCCCGGC
TCCGGCTGGCAGCCCGGCTCCGAGCCCGGCTACGACCCGGAGCTGCCCGACGGCGGGCACGCGTCCGTGCCGGCG
CTCAGCGCGCCCTGCGACATCACCGTCGTCGACTTCTCGCTCGACCGCGTCGTCCAGCGCCGCTTCGACAACGAG
TCCTTCATCGCCTTCCTCGACCAGCCCAAGGACGACTGGGCCCAGTGCCGGTGGATCAACGTCAACGGCCTCAGC
TGGGACGTCATCCAGGCCATCGGCTCCAAGAAGGGGTTGCACAAGCTCGCGCTCGAGGACGTCATGAACATGCGC
AACCGCACCAAGGCCGACTGGTACCCGAACCACGCCTTCATCGTCCTGACGCTGCAGAAGCTCGTCCACGTCGTC
GATGCCGACGCCGCCGCCGCCGAGGCGGACGCGGACGCCGCCCCGCCGCCCCGATCCGGCTCCGCCGACGTGCTC
CGGACCGTGTTTGGCCGGCTGCCCGCCCGTGTTCGGAACCTCTTCCGCCGCAAAAGGCGGCGCAACGTCCCGGCG
ACGCCCCGGGCCGACGCCGCCGCCGACGAGGACGACGCCGGCAGTGCGGTCGCCGGCCAGCTGGAAAAGGGCTCT
CCCTCTTCTCCTCCCTCCCCCGAGCACCAGCACCGCCATCGGCCGGCCGAGGCCGGCGAGACGTTGATGCTGCGC
TCCCTCCAGCGCTACCACGCCTCCGGCAACGAGGCCCGCACGGCCTACATGGAGAAGGAGTCGCCGCTGGCGCGC
TACAACATGGCCGTCTCGGCCGAGCAGGTGTCCATCTTCCTGACCAACGACAACACGGCCGTCTCCTTCTTCGAG
ATGTCGGCCGCCGACGTCGAGCGGCCGATCGTGACGCGCCTCAGCACCCACGGCACCGTCCTGCGCGAGTCGTCC
GACGCCTCGATGCTGGTCCAGGCCATCCTCGACGCCATCGTCGACCTGGCCATCCCCCTGACGACCGTCTACTCC
GACCTGCTGGGCGACCTCGAGCTCGACGTGCTGACGGCGCCCTCGATCCGCCAGAGCCGCTCGCTCTACATCTTC
ATCTCCGAGATCAACAAGATGGTCCGCTTCCTGCAGCCCATCGACAACCTCGTCAGCGTCATGCGCGACCACCGC
ACCGCCCTGGCCCCGGACCGGGCCGCCCGCGAGCTCGCCAACCCGGCCTCGGGCGTCATCATCACCCCCATCACC
CACACCTACCTCGGCGACGTCCTCGACCACTGCATCATCATCACCGAGGCCCTGCAGCAGCTGAAGCAGTCGAGC
GAGGACCTCATCAGCCTCATCTTCAACACCATCTCCGCCAACCAGAACGAGTCCATGCGCCAGCTCACCACCGTC
ACCATCATCTTCCTGCCCCTGACCTTCATCACCGGCTTCTTCGGCCAAAACTTTTCCGAAAAGTACTTTCCCGAG
ATTCACAACGGCATCTGGTACTTGTACGTCTTCGACCCCTGACCCCCGTGCTCTCTCTGCAATTCGCTCCGCAAA
GCTGTCTCGGTAGCCGTCGTCTGACCCCCCTTCTGTTAGCTGGGCCTGTGCCGTGCCCACCGCCGTGGCCACCAT
CCTCATCCTCATGTTCGACATGATCCGGGCCTGGTTCGTCCGCCTGTTCCGCAGAAAACAAATCCTCAGCATTCG
CCGAAAGGCGAGGTCCAGCCGCCGCCGGCGGAAGCAACAGTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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