© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|10065 |
| Gene name | |
| Location | Contig_781:8607..10675 |
| Strand | - |
| Gene length (bp) | 2068 |
| Transcript length (bp) | 1977 |
| Coding sequence length (bp) | 1977 |
| Protein length (aa) | 659 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01544 | CorA | CorA-like Mg2+ transporter protein | 6.8E-25 | 421 | 625 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9WZ31|CORA_THEMA | Magnesium transport protein CorA OS=Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) GN=corA PE=1 SV=1 | 380 | 625 | 2.0E-16 |
| sp|Q9WZ31|CORA_THEMA | Magnesium transport protein CorA OS=Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) GN=corA PE=1 SV=1 | 140 | 354 | 7.0E-09 |
| sp|O31543|YFJQ_BACSU | Putative metal ion transporter YfjQ OS=Bacillus subtilis (strain 168) GN=yfjQ PE=3 SV=1 | 525 | 632 | 2.0E-08 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0030001 | metal ion transport | Yes |
| GO:0046873 | metal ion transmembrane transporter activity | Yes |
| GO:0016020 | membrane | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0005215 | transporter activity | No |
| GO:0051179 | localization | No |
| GO:0051234 | establishment of localization | No |
| GO:0008150 | biological_process | No |
| GO:0009987 | cellular process | No |
| GO:0015318 | inorganic molecular entity transmembrane transporter activity | No |
| GO:0022857 | transmembrane transporter activity | No |
| GO:0006811 | ion transport | No |
| GO:0015075 | ion transmembrane transporter activity | No |
| GO:0008324 | cation transmembrane transporter activity | No |
| GO:0022890 | inorganic cation transmembrane transporter activity | No |
| GO:0006812 | cation transport | No |
| GO:0006810 | transport | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0003674 | molecular_function | No |
| GO:0005575 | cellular_component | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 50 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 571 | 593 | 22 |
| 2 | 606 | 628 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|10065 MASPAASPLGGGHRQAQAASPSPAPSPAPAQQHHHHHRPHRRHLDRNVRKGGASHSDSAVHRVAAALVSSPPMPA SSPFVLSRRRSSQAVGSPAAGLFRTIVDDGDDLIDDDGDEDDGAATDPPGSGWQPGSEPGYDPELPDGGHASVPA LSAPCDITVVDFSLDRVVQRRFDNESFIAFLDQPKDDWAQCRWINVNGLSWDVIQAIGSKKGLHKLALEDVMNMR NRTKADWYPNHAFIVLTLQKLVHVVDADAAAAEADADAAPPPRSGSADVLRTVFGRLPARVRNLFRRKRRRNVPA TPRADAAADEDDAGSAVAGQLEKGSPSSPPSPEHQHRHRPAEAGETLMLRSLQRYHASGNEARTAYMEKESPLAR YNMAVSAEQVSIFLTNDNTAVSFFEMSAADVERPIVTRLSTHGTVLRESSDASMLVQAILDAIVDLAIPLTTVYS DLLGDLELDVLTAPSIRQSRSLYIFISEINKMVRFLQPIDNLVSVMRDHRTALAPDRAARELANPASGVIITPIT HTYLGDVLDHCIIITEALQQLKQSSEDLISLIFNTISANQNESMRQLTTVTIIFLPLTFITGFFGQNFSEKYFPE IHNGIWYFWACAVPTAVATILILMFDMIRAWFVRLFRRKQILSIRRKARSSRRRRKQQ* |
| Coding | >Hirsu2|10065 ATGGCCTCGCCCGCTGCCTCGCCCCTTGGGGGCGGCCATCGTCAAGCTCAGGCAGCTTCTCCTTCTCCTGCGCCG TCGCCGGCGCCTGCTCAACAGCACCACCATCACCATCGTCCCCATCGCCGGCACCTGGACCGCAACGTCCGTAAG GGCGGCGCCTCGCACTCGGACTCGGCCGTGCACCGCGTCGCCGCAGCGCTCGTGTCGTCGCCTCCGATGCCGGCC TCGTCGCCCTTCGTCCTGTCCCGCCGGCGGAGCAGCCAGGCGGTCGGCTCGCCGGCGGCCGGCCTGTTCCGGACC ATCGTCGACGACGGCGACGACCTCATCGACGACGACGGCGACGAGGATGACGGCGCGGCGACGGATCCGCCCGGC TCCGGCTGGCAGCCCGGCTCCGAGCCCGGCTACGACCCGGAGCTGCCCGACGGCGGGCACGCGTCCGTGCCGGCG CTCAGCGCGCCCTGCGACATCACCGTCGTCGACTTCTCGCTCGACCGCGTCGTCCAGCGCCGCTTCGACAACGAG TCCTTCATCGCCTTCCTCGACCAGCCCAAGGACGACTGGGCCCAGTGCCGGTGGATCAACGTCAACGGCCTCAGC TGGGACGTCATCCAGGCCATCGGCTCCAAGAAGGGGTTGCACAAGCTCGCGCTCGAGGACGTCATGAACATGCGC AACCGCACCAAGGCCGACTGGTACCCGAACCACGCCTTCATCGTCCTGACGCTGCAGAAGCTCGTCCACGTCGTC GATGCCGACGCCGCCGCCGCCGAGGCGGACGCGGACGCCGCCCCGCCGCCCCGATCCGGCTCCGCCGACGTGCTC CGGACCGTGTTTGGCCGGCTGCCCGCCCGTGTTCGGAACCTCTTCCGCCGCAAAAGGCGGCGCAACGTCCCGGCG ACGCCCCGGGCCGACGCCGCCGCCGACGAGGACGACGCCGGCAGTGCGGTCGCCGGCCAGCTGGAAAAGGGCTCT CCCTCTTCTCCTCCCTCCCCCGAGCACCAGCACCGCCATCGGCCGGCCGAGGCCGGCGAGACGTTGATGCTGCGC TCCCTCCAGCGCTACCACGCCTCCGGCAACGAGGCCCGCACGGCCTACATGGAGAAGGAGTCGCCGCTGGCGCGC TACAACATGGCCGTCTCGGCCGAGCAGGTGTCCATCTTCCTGACCAACGACAACACGGCCGTCTCCTTCTTCGAG ATGTCGGCCGCCGACGTCGAGCGGCCGATCGTGACGCGCCTCAGCACCCACGGCACCGTCCTGCGCGAGTCGTCC GACGCCTCGATGCTGGTCCAGGCCATCCTCGACGCCATCGTCGACCTGGCCATCCCCCTGACGACCGTCTACTCC GACCTGCTGGGCGACCTCGAGCTCGACGTGCTGACGGCGCCCTCGATCCGCCAGAGCCGCTCGCTCTACATCTTC ATCTCCGAGATCAACAAGATGGTCCGCTTCCTGCAGCCCATCGACAACCTCGTCAGCGTCATGCGCGACCACCGC ACCGCCCTGGCCCCGGACCGGGCCGCCCGCGAGCTCGCCAACCCGGCCTCGGGCGTCATCATCACCCCCATCACC CACACCTACCTCGGCGACGTCCTCGACCACTGCATCATCATCACCGAGGCCCTGCAGCAGCTGAAGCAGTCGAGC GAGGACCTCATCAGCCTCATCTTCAACACCATCTCCGCCAACCAGAACGAGTCCATGCGCCAGCTCACCACCGTC ACCATCATCTTCCTGCCCCTGACCTTCATCACCGGCTTCTTCGGCCAAAACTTTTCCGAAAAGTACTTTCCCGAG ATTCACAACGGCATCTGGTACTTCTGGGCCTGTGCCGTGCCCACCGCCGTGGCCACCATCCTCATCCTCATGTTC GACATGATCCGGGCCTGGTTCGTCCGCCTGTTCCGCAGAAAACAAATCCTCAGCATTCGCCGAAAGGCGAGGTCC AGCCGCCGCCGGCGGAAGCAACAGTGA |
| Transcript | >Hirsu2|10065 ATGGCCTCGCCCGCTGCCTCGCCCCTTGGGGGCGGCCATCGTCAAGCTCAGGCAGCTTCTCCTTCTCCTGCGCCG TCGCCGGCGCCTGCTCAACAGCACCACCATCACCATCGTCCCCATCGCCGGCACCTGGACCGCAACGTCCGTAAG GGCGGCGCCTCGCACTCGGACTCGGCCGTGCACCGCGTCGCCGCAGCGCTCGTGTCGTCGCCTCCGATGCCGGCC TCGTCGCCCTTCGTCCTGTCCCGCCGGCGGAGCAGCCAGGCGGTCGGCTCGCCGGCGGCCGGCCTGTTCCGGACC ATCGTCGACGACGGCGACGACCTCATCGACGACGACGGCGACGAGGATGACGGCGCGGCGACGGATCCGCCCGGC TCCGGCTGGCAGCCCGGCTCCGAGCCCGGCTACGACCCGGAGCTGCCCGACGGCGGGCACGCGTCCGTGCCGGCG CTCAGCGCGCCCTGCGACATCACCGTCGTCGACTTCTCGCTCGACCGCGTCGTCCAGCGCCGCTTCGACAACGAG TCCTTCATCGCCTTCCTCGACCAGCCCAAGGACGACTGGGCCCAGTGCCGGTGGATCAACGTCAACGGCCTCAGC TGGGACGTCATCCAGGCCATCGGCTCCAAGAAGGGGTTGCACAAGCTCGCGCTCGAGGACGTCATGAACATGCGC AACCGCACCAAGGCCGACTGGTACCCGAACCACGCCTTCATCGTCCTGACGCTGCAGAAGCTCGTCCACGTCGTC GATGCCGACGCCGCCGCCGCCGAGGCGGACGCGGACGCCGCCCCGCCGCCCCGATCCGGCTCCGCCGACGTGCTC CGGACCGTGTTTGGCCGGCTGCCCGCCCGTGTTCGGAACCTCTTCCGCCGCAAAAGGCGGCGCAACGTCCCGGCG ACGCCCCGGGCCGACGCCGCCGCCGACGAGGACGACGCCGGCAGTGCGGTCGCCGGCCAGCTGGAAAAGGGCTCT CCCTCTTCTCCTCCCTCCCCCGAGCACCAGCACCGCCATCGGCCGGCCGAGGCCGGCGAGACGTTGATGCTGCGC TCCCTCCAGCGCTACCACGCCTCCGGCAACGAGGCCCGCACGGCCTACATGGAGAAGGAGTCGCCGCTGGCGCGC TACAACATGGCCGTCTCGGCCGAGCAGGTGTCCATCTTCCTGACCAACGACAACACGGCCGTCTCCTTCTTCGAG ATGTCGGCCGCCGACGTCGAGCGGCCGATCGTGACGCGCCTCAGCACCCACGGCACCGTCCTGCGCGAGTCGTCC GACGCCTCGATGCTGGTCCAGGCCATCCTCGACGCCATCGTCGACCTGGCCATCCCCCTGACGACCGTCTACTCC GACCTGCTGGGCGACCTCGAGCTCGACGTGCTGACGGCGCCCTCGATCCGCCAGAGCCGCTCGCTCTACATCTTC ATCTCCGAGATCAACAAGATGGTCCGCTTCCTGCAGCCCATCGACAACCTCGTCAGCGTCATGCGCGACCACCGC ACCGCCCTGGCCCCGGACCGGGCCGCCCGCGAGCTCGCCAACCCGGCCTCGGGCGTCATCATCACCCCCATCACC CACACCTACCTCGGCGACGTCCTCGACCACTGCATCATCATCACCGAGGCCCTGCAGCAGCTGAAGCAGTCGAGC GAGGACCTCATCAGCCTCATCTTCAACACCATCTCCGCCAACCAGAACGAGTCCATGCGCCAGCTCACCACCGTC ACCATCATCTTCCTGCCCCTGACCTTCATCACCGGCTTCTTCGGCCAAAACTTTTCCGAAAAGTACTTTCCCGAG ATTCACAACGGCATCTGGTACTTCTGGGCCTGTGCCGTGCCCACCGCCGTGGCCACCATCCTCATCCTCATGTTC GACATGATCCGGGCCTGGTTCGTCCGCCTGTTCCGCAGAAAACAAATCCTCAGCATTCGCCGAAAGGCGAGGTCC AGCCGCCGCCGGCGGAAGCAACAGTGA |
| Gene | >Hirsu2|10065 ATGGCCTCGCCCGCTGCCTCGCCCCTTGGGGGCGGCCATCGTCAAGCTCAGGCAGCTTCTCCTTCTCCTGCGCCG TCGCCGGCGCCTGCTCAACAGCACCACCATCACCATCGTCCCCATCGCCGGCACCTGGACCGCAACGTCCGTAAG GGCGGCGCCTCGCACTCGGACTCGGCCGTGCACCGCGTCGCCGCAGCGCTCGTGTCGTCGCCTCCGATGCCGGCC TCGTCGCCCTTCGTCCTGTCCCGCCGGCGGAGCAGCCAGGCGGTCGGCTCGCCGGCGGCCGGCCTGTTCCGGACC ATCGTCGACGACGGCGACGACCTCATCGACGACGACGGCGACGAGGATGACGGCGCGGCGACGGATCCGCCCGGC TCCGGCTGGCAGCCCGGCTCCGAGCCCGGCTACGACCCGGAGCTGCCCGACGGCGGGCACGCGTCCGTGCCGGCG CTCAGCGCGCCCTGCGACATCACCGTCGTCGACTTCTCGCTCGACCGCGTCGTCCAGCGCCGCTTCGACAACGAG TCCTTCATCGCCTTCCTCGACCAGCCCAAGGACGACTGGGCCCAGTGCCGGTGGATCAACGTCAACGGCCTCAGC TGGGACGTCATCCAGGCCATCGGCTCCAAGAAGGGGTTGCACAAGCTCGCGCTCGAGGACGTCATGAACATGCGC AACCGCACCAAGGCCGACTGGTACCCGAACCACGCCTTCATCGTCCTGACGCTGCAGAAGCTCGTCCACGTCGTC GATGCCGACGCCGCCGCCGCCGAGGCGGACGCGGACGCCGCCCCGCCGCCCCGATCCGGCTCCGCCGACGTGCTC CGGACCGTGTTTGGCCGGCTGCCCGCCCGTGTTCGGAACCTCTTCCGCCGCAAAAGGCGGCGCAACGTCCCGGCG ACGCCCCGGGCCGACGCCGCCGCCGACGAGGACGACGCCGGCAGTGCGGTCGCCGGCCAGCTGGAAAAGGGCTCT CCCTCTTCTCCTCCCTCCCCCGAGCACCAGCACCGCCATCGGCCGGCCGAGGCCGGCGAGACGTTGATGCTGCGC TCCCTCCAGCGCTACCACGCCTCCGGCAACGAGGCCCGCACGGCCTACATGGAGAAGGAGTCGCCGCTGGCGCGC TACAACATGGCCGTCTCGGCCGAGCAGGTGTCCATCTTCCTGACCAACGACAACACGGCCGTCTCCTTCTTCGAG ATGTCGGCCGCCGACGTCGAGCGGCCGATCGTGACGCGCCTCAGCACCCACGGCACCGTCCTGCGCGAGTCGTCC GACGCCTCGATGCTGGTCCAGGCCATCCTCGACGCCATCGTCGACCTGGCCATCCCCCTGACGACCGTCTACTCC GACCTGCTGGGCGACCTCGAGCTCGACGTGCTGACGGCGCCCTCGATCCGCCAGAGCCGCTCGCTCTACATCTTC ATCTCCGAGATCAACAAGATGGTCCGCTTCCTGCAGCCCATCGACAACCTCGTCAGCGTCATGCGCGACCACCGC ACCGCCCTGGCCCCGGACCGGGCCGCCCGCGAGCTCGCCAACCCGGCCTCGGGCGTCATCATCACCCCCATCACC CACACCTACCTCGGCGACGTCCTCGACCACTGCATCATCATCACCGAGGCCCTGCAGCAGCTGAAGCAGTCGAGC GAGGACCTCATCAGCCTCATCTTCAACACCATCTCCGCCAACCAGAACGAGTCCATGCGCCAGCTCACCACCGTC ACCATCATCTTCCTGCCCCTGACCTTCATCACCGGCTTCTTCGGCCAAAACTTTTCCGAAAAGTACTTTCCCGAG ATTCACAACGGCATCTGGTACTTGTACGTCTTCGACCCCTGACCCCCGTGCTCTCTCTGCAATTCGCTCCGCAAA GCTGTCTCGGTAGCCGTCGTCTGACCCCCCTTCTGTTAGCTGGGCCTGTGCCGTGCCCACCGCCGTGGCCACCAT CCTCATCCTCATGTTCGACATGATCCGGGCCTGGTTCGTCCGCCTGTTCCGCAGAAAACAAATCCTCAGCATTCG CCGAAAGGCGAGGTCCAGCCGCCGCCGGCGGAAGCAACAGTGA |