Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|1006
Gene name
LocationContig_1208:3854..5199
Strand+
Gene length (bp)1345
Transcript length (bp)1191
Coding sequence length (bp)1191
Protein length (aa) 397

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF20463 PDH_C Prephenate dehydrogenase, dimerization domain 3.7E-07 131 231

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|O60078|TYR1_SCHPO Probable prephenate dehydrogenase [NADP(+)] OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tyr1 PE=2 SV=1 8 392 1.0E-154
sp|P20049|TYR1_YEAST Prephenate dehydrogenase [NADP(+)] OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TYR1 PE=1 SV=2 15 396 6.0E-146
sp|Q58029|Y612_METJA Probable arogenate/prephenate dehydrogenase OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ0612 PE=3 SV=1 16 204 8.0E-11

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm Peroxisomal targeting signal 0.5569 0.2395 0.0849 0.2327 0.2462 0.0534 0.09 0.2257 0.0902 0.4559

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup4766
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|4512
Ophiocordyceps australis map64 (Brazil) OphauB2|3354
Ophiocordyceps camponoti-floridani Ophcf2|01759
Ophiocordyceps camponoti-rufipedis Ophun1|997
Ophiocordyceps kimflemingae Ophio5|4960
Ophiocordyceps subramaniannii Hirsu2|1006 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|1006
MLRCSVAEAPFLQNKIEICRNGHLVSRASDFIIYSVEAAIIDRVIARYGPSTKMGAIVGGQTSCKSPEIAAFEAY
LPADVSIVSCHSLHGPGVDPHNQPLVIIQHRAPDAAVRTVEMVLACLRSQFVRLTAREHDRITADTQAVTHAAFL
SMGKAWHANRQFPWELSRYVGGIENVKINTMLRIYGQKWHVYAGLAILNPEARKQVAQYAESVTQLYTLMLEGDV
DSLRERVHAARDKVFGPPEAWAARPPLIEPSVLPSFSLGAPADAAPRPNNHLSLLAMVDCWAALGIVPYEHMLCS
TPLFRLRLGVTEHLFRSPSLLDEALRTAVDDKTYRSDDLEFTFAARGWAECVSLGHFETWEKRFVSTQEFFQPRF
AQARIIGDQMMKKVLESAKDR*
Coding >Hirsu2|1006
ATGCTTCGATGCTCTGTTGCTGAAGCCCCATTCTTGCAGAATAAGATCGAGATATGCCGTAACGGCCACCTCGTG
TCCCGCGCCAGCGACTTCATCATCTACAGCGTCGAAGCTGCCATCATTGACAGGGTCATTGCCCGCTATGGCCCG
TCCACCAAGATGGGAGCCATCGTCGGCGGCCAGACATCGTGTAAGTCACCCGAGATCGCGGCATTCGAGGCCTAT
CTCCCGGCGGACGTGTCGATCGTGTCGTGCCACTCGCTGCACGGGCCGGGCGTCGACCCGCACAACCAGCCGCTC
GTCATCATCCAGCACCGAGCGCCAGACGCAGCGGTGCGGACGGTGGAGATGGTGCTGGCCTGCCTGCGGTCGCAA
TTCGTGCGGCTGACGGCGCGGGAGCACGACCGCATCACGGCCGACACACAGGCCGTCACGCACGCCGCCTTCCTG
TCCATGGGCAAGGCCTGGCACGCCAACCGGCAGTTCCCATGGGAGCTGAGTCGATACGTTGGCGGCATCGAGAAC
GTCAAGATCAACACGATGCTGCGCATCTACGGTCAGAAGTGGCACGTCTACGCCGGCCTGGCCATCCTCAACCCC
GAGGCCCGCAAGCAGGTGGCCCAGTACGCCGAGAGCGTGACGCAGCTGTACACGCTGATGCTCGAGGGTGACGTC
GATAGCCTGCGCGAGCGCGTCCACGCCGCCCGCGACAAGGTCTTCGGCCCGCCCGAGGCTTGGGCCGCCCGCCCG
CCGCTGATCGAGCCGTCCGTACTGCCGTCTTTCTCGCTCGGGGCCCCCGCCGACGCCGCGCCACGGCCCAACAAC
CACCTCTCCCTGCTGGCCATGGTCGACTGTTGGGCCGCCCTGGGCATCGTCCCCTACGAGCACATGCTGTGTAGC
ACTCCACTCTTCCGCCTGCGCCTCGGCGTCACCGAGCACCTCTTCCGCAGCCCCAGCCTGCTGGACGAGGCCCTG
CGCACCGCCGTCGACGACAAGACCTATCGAAGCGACGACCTCGAGTTTACCTTCGCCGCCCGTGGATGGGCCGAG
TGCGTCAGCCTCGGCCACTTCGAGACGTGGGAGAAGCGCTTTGTGAGCACCCAGGAGTTCTTCCAGCCCCGCTTT
GCCCAAGCCAGGATCATTGGAGATCAGATGATGAAGAAGGTGTTGGAAAGCGCAAAGGATCGATAA
Transcript >Hirsu2|1006
ATGCTTCGATGCTCTGTTGCTGAAGCCCCATTCTTGCAGAATAAGATCGAGATATGCCGTAACGGCCACCTCGTG
TCCCGCGCCAGCGACTTCATCATCTACAGCGTCGAAGCTGCCATCATTGACAGGGTCATTGCCCGCTATGGCCCG
TCCACCAAGATGGGAGCCATCGTCGGCGGCCAGACATCGTGTAAGTCACCCGAGATCGCGGCATTCGAGGCCTAT
CTCCCGGCGGACGTGTCGATCGTGTCGTGCCACTCGCTGCACGGGCCGGGCGTCGACCCGCACAACCAGCCGCTC
GTCATCATCCAGCACCGAGCGCCAGACGCAGCGGTGCGGACGGTGGAGATGGTGCTGGCCTGCCTGCGGTCGCAA
TTCGTGCGGCTGACGGCGCGGGAGCACGACCGCATCACGGCCGACACACAGGCCGTCACGCACGCCGCCTTCCTG
TCCATGGGCAAGGCCTGGCACGCCAACCGGCAGTTCCCATGGGAGCTGAGTCGATACGTTGGCGGCATCGAGAAC
GTCAAGATCAACACGATGCTGCGCATCTACGGTCAGAAGTGGCACGTCTACGCCGGCCTGGCCATCCTCAACCCC
GAGGCCCGCAAGCAGGTGGCCCAGTACGCCGAGAGCGTGACGCAGCTGTACACGCTGATGCTCGAGGGTGACGTC
GATAGCCTGCGCGAGCGCGTCCACGCCGCCCGCGACAAGGTCTTCGGCCCGCCCGAGGCTTGGGCCGCCCGCCCG
CCGCTGATCGAGCCGTCCGTACTGCCGTCTTTCTCGCTCGGGGCCCCCGCCGACGCCGCGCCACGGCCCAACAAC
CACCTCTCCCTGCTGGCCATGGTCGACTGTTGGGCCGCCCTGGGCATCGTCCCCTACGAGCACATGCTGTGTAGC
ACTCCACTCTTCCGCCTGCGCCTCGGCGTCACCGAGCACCTCTTCCGCAGCCCCAGCCTGCTGGACGAGGCCCTG
CGCACCGCCGTCGACGACAAGACCTATCGAAGCGACGACCTCGAGTTTACCTTCGCCGCCCGTGGATGGGCCGAG
TGCGTCAGCCTCGGCCACTTCGAGACGTGGGAGAAGCGCTTTGTGAGCACCCAGGAGTTCTTCCAGCCCCGCTTT
GCCCAAGCCAGGATCATTGGAGATCAGATGATGAAGAAGGTGTTGGAAAGCGCAAAGGATCGATAA
Gene >Hirsu2|1006
ATGCTTCGATGCTCTGTTGCTGAAGCCCCATTCTTGCAGAATAAGATCGAGATATGCCGTAACGGCCACCTCGTG
TCCCGCGCCAGCGACTTCATCATCTACAGCGTCGAAGCTGCCATCATTGACAGGGTCATTGCCCGCTATGGCCCG
TGTAAGATGTCCGAACCTCCCCTCCAGATTCCTCTCGCCCCATAATATGATCCGGGGAAAGAGGGGGAAGAGACC
AGCCCCTCCCCTCCCCCTCCCCCTCAGTTGTCGCCTTTCTCTCCCCTCCTGTTCTAACGCGTGTCGCCGTGACTG
TCCAGCCACCAAGATGGGAGCCATCGTCGGCGGCCAGACATCGTGTAAGTCACCCGAGATCGCGGCATTCGAGGC
CTATCTCCCGGCGGACGTGTCGATCGTGTCGTGCCACTCGCTGCACGGGCCGGGCGTCGACCCGCACAACCAGCC
GCTCGTCATCATCCAGCACCGAGCGCCAGACGCAGCGGTGCGGACGGTGGAGATGGTGCTGGCCTGCCTGCGGTC
GCAATTCGTGCGGCTGACGGCGCGGGAGCACGACCGCATCACGGCCGACACACAGGCCGTCACGCACGCCGCCTT
CCTGTCCATGGGCAAGGCCTGGCACGCCAACCGGCAGTTCCCATGGGAGCTGAGTCGATACGTTGGCGGCATCGA
GAACGTCAAGATCAACACGATGCTGCGCATCTACGGTCAGAAGTGGCACGTCTACGCCGGCCTGGCCATCCTCAA
CCCCGAGGCCCGCAAGCAGGTGGCCCAGTACGCCGAGAGCGTGACGCAGCTGTACACGCTGATGCTCGAGGGTGA
CGTCGATAGCCTGCGCGAGCGCGTCCACGCCGCCCGCGACAAGGTCTTCGGCCCGCCCGAGGCTTGGGCCGCCCG
CCCGCCGCTGATCGAGCCGTCCGTACTGCCGTCTTTCTCGCTCGGGGCCCCCGCCGACGCCGCGCCACGGCCCAA
CAACCACCTCTCCCTGCTGGCCATGGTCGACTGTTGGGCCGCCCTGGGCATCGTCCCCTACGAGCACATGCTGTG
TAGCACTCCACTCTTCCGCCTGCGCCTCGGCGTCACCGAGCACCTCTTCCGCAGCCCCAGCCTGCTGGACGAGGC
CCTGCGCACCGCCGTCGACGACAAGACCTATCGAAGCGACGACCTCGAGTTTACCTTCGCCGCCCGTGGATGGGC
CGAGTGCGTCAGCCTCGGCCACTTCGAGACGTGGGAGAAGCGCTTTGTGAGCACCCAGGAGTTCTTCCAGCCCCG
CTTTGCCCAAGCCAGGATCATTGGAGATCAGATGATGAAGAAGGTGTTGGAAAGCGCAAAGGATCGATAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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