© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|1003 |
| Gene name | |
| Location | Contig_1207:7549..8155 |
| Strand | - |
| Gene length (bp) | 606 |
| Transcript length (bp) | 606 |
| Coding sequence length (bp) | 606 |
| Protein length (aa) | 202 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00463 | ICL | Isocitrate lyase family | 3.0E-65 | 7 | 200 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|G9NNY7|ACEB_HYPAI | 2-methylisocitrate lyase, mitochondrial OS=Hypocrea atroviridis (strain ATCC 20476 / IMI 206040) GN=mcl PE=3 SV=1 | 1 | 201 | 2.0E-109 |
| sp|C8V9Y5|ACEB_EMENI | Methylisocitrate lyase, mitochondrial OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=mclA PE=1 SV=1 | 1 | 197 | 3.0E-80 |
| sp|Q6BZP5|ACEB_YARLI | 2-methylisocitrate lyase, mitochondrial OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0F31999g PE=1 SV=1 | 7 | 200 | 5.0E-74 |
| sp|Q12031|ACEB_YEAST | Mitochondrial 2-methylisocitrate lyase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ICL2 PE=1 SV=1 | 5 | 200 | 3.0E-71 |
| sp|A8NR45|ACEA_COPC7 | Isocitrate lyase OS=Coprinopsis cinerea (strain Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003) GN=ACU-7 PE=3 SV=1 | 20 | 200 | 2.0E-63 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|G9NNY7|ACEB_HYPAI | 2-methylisocitrate lyase, mitochondrial OS=Hypocrea atroviridis (strain ATCC 20476 / IMI 206040) GN=mcl PE=3 SV=1 | 1 | 201 | 2.0E-109 |
| sp|C8V9Y5|ACEB_EMENI | Methylisocitrate lyase, mitochondrial OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=mclA PE=1 SV=1 | 1 | 197 | 3.0E-80 |
| sp|Q6BZP5|ACEB_YARLI | 2-methylisocitrate lyase, mitochondrial OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0F31999g PE=1 SV=1 | 7 | 200 | 5.0E-74 |
| sp|Q12031|ACEB_YEAST | Mitochondrial 2-methylisocitrate lyase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ICL2 PE=1 SV=1 | 5 | 200 | 3.0E-71 |
| sp|A8NR45|ACEA_COPC7 | Isocitrate lyase OS=Coprinopsis cinerea (strain Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003) GN=ACU-7 PE=3 SV=1 | 20 | 200 | 2.0E-63 |
| sp|O13439|ACEA_COPCI | Isocitrate lyase OS=Coprinopsis cinerea GN=ACU-7 PE=3 SV=1 | 20 | 200 | 5.0E-60 |
| sp|P17069|ACEA_GOSHI | Isocitrate lyase OS=Gossypium hirsutum PE=2 SV=1 | 20 | 200 | 1.0E-56 |
| sp|P45456|ACEA1_SOYBN | Isocitrate lyase 1 (Fragment) OS=Glycine max GN=ICL1 PE=2 SV=1 | 20 | 200 | 7.0E-55 |
| sp|P93110|ACEA_CUCMA | Isocitrate lyase OS=Cucurbita maxima PE=2 SV=1 | 20 | 200 | 7.0E-55 |
| sp|Q9SE26|ACEA_DENCR | Isocitrate lyase OS=Dendrobium crumenatum GN=ICL PE=2 SV=1 | 18 | 200 | 1.0E-54 |
| sp|Q6Z6M4|ACEA_ORYSJ | Isocitrate lyase OS=Oryza sativa subsp. japonica GN=ICL PE=1 SV=1 | 3 | 200 | 1.0E-54 |
| sp|P45457|ACEA2_SOYBN | Isocitrate lyase 2 (Fragment) OS=Glycine max GN=ICL2 PE=2 SV=1 | 20 | 200 | 1.0E-54 |
| sp|Q6FPK7|ACEA_CANGA | Isocitrate lyase OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=ICL1 PE=3 SV=2 | 18 | 200 | 2.0E-54 |
| sp|P49296|ACEA_CUCSA | Isocitrate lyase OS=Cucumis sativus PE=3 SV=1 | 20 | 200 | 2.0E-54 |
| sp|P28240|ACEA_YEAST | Isocitrate lyase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ICL1 PE=1 SV=1 | 18 | 200 | 2.0E-54 |
| sp|P15479|ACEA_RICCO | Isocitrate lyase OS=Ricinus communis PE=2 SV=1 | 20 | 200 | 2.0E-53 |
| sp|P28298|ACEA_EMENI | Isocitrate lyase OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=acuD PE=1 SV=3 | 7 | 200 | 2.0E-52 |
| sp|O94198|ACEA_ASHGO | Isocitrate lyase OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=ICL1 PE=3 SV=1 | 18 | 200 | 3.0E-52 |
| sp|Q96TP5|ACEA_COCIM | Isocitrate lyase OS=Coccidioides immitis (strain RS) GN=ICL1 PE=2 SV=2 | 7 | 200 | 3.0E-52 |
| sp|P41555|ACEA_YARLI | Isocitrate lyase OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=ICL1 PE=3 SV=3 | 18 | 200 | 6.0E-52 |
| sp|P25248|ACEA_BRANA | Isocitrate lyase OS=Brassica napus PE=2 SV=1 | 7 | 200 | 1.0E-51 |
| sp|P28297|ACEA_ARATH | Isocitrate lyase OS=Arabidopsis thaliana GN=ICL PE=1 SV=2 | 7 | 200 | 7.0E-51 |
| sp|Q43097|ACEA_PINTA | Isocitrate lyase OS=Pinus taeda GN=ICL 8 PE=2 SV=1 | 20 | 201 | 7.0E-51 |
| sp|Q8NJ72|ACEA_KLULA | Isocitrate lyase OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=ICL1 PE=2 SV=1 | 3 | 200 | 8.0E-51 |
| sp|Q6T267|ACEA_ASPFU | Isocitrate lyase OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=icl1 PE=3 SV=2 | 7 | 200 | 1.0E-50 |
| sp|L7HUY5|ACEA_MAGOY | Isocitrate lyase OS=Magnaporthe oryzae (strain Y34) GN=ICL1 PE=2 SV=2 | 7 | 200 | 1.0E-50 |
| sp|P0CT06|ACEA_MAGO7 | Isocitrate lyase OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=ICL1 PE=3 SV=1 | 7 | 200 | 1.0E-50 |
| sp|P49297|ACEA_SOLLC | Isocitrate lyase OS=Solanum lycopersicum PE=2 SV=1 | 20 | 201 | 8.0E-50 |
| sp|Q4HYR2|ACEA_GIBZE | Isocitrate lyase OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=ICL1 PE=3 SV=1 | 7 | 200 | 2.0E-49 |
| sp|P28299|ACEA_NEUCR | Isocitrate lyase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=acu-3 PE=2 SV=2 | 7 | 200 | 7.0E-49 |
| sp|Q86ZF1|ACEA_LEPMC | Isocitrate lyase OS=Leptosphaeria maculans GN=ICL1 PE=2 SV=1 | 18 | 200 | 2.0E-48 |
| sp|Q9P8Q7|ACEA_CANAX | Isocitrate lyase OS=Candida albicans GN=ICL1 PE=3 SV=1 | 18 | 200 | 1.0E-47 |
| sp|Q9HFN2|ACEA_CYBJA | Isocitrate lyase OS=Cyberlindnera jadinii GN=ICL1 PE=3 SV=1 | 7 | 200 | 4.0E-47 |
| sp|Q6BRY4|ACEA_DEBHA | Isocitrate lyase OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=ICL1 PE=3 SV=1 | 7 | 200 | 5.0E-47 |
| sp|Q96WZ5|ACEA_TALMA | Isocitrate lyase OS=Talaromyces marneffei GN=icl1 PE=3 SV=1 | 7 | 200 | 9.0E-47 |
| sp|Q9C124|ACEA_PICPA | Isocitrate lyase OS=Komagataella pastoris GN=ICL1 PE=3 SV=1 | 18 | 200 | 2.0E-46 |
| sp|P20014|ACEA_CANTR | Isocitrate lyase OS=Candida tropicalis GN=ICL1 PE=3 SV=1 | 7 | 200 | 3.0E-46 |
| sp|P0A9G6|ACEA_ECOLI | Isocitrate lyase OS=Escherichia coli (strain K12) GN=aceA PE=1 SV=1 | 26 | 200 | 2.0E-35 |
| sp|P0A9G7|ACEA_ECOL6 | Isocitrate lyase OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=aceA PE=3 SV=1 | 26 | 200 | 2.0E-35 |
| sp|P51066|ACEA_SALTY | Isocitrate lyase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=aceA PE=3 SV=2 | 26 | 200 | 7.0E-35 |
| sp|Q8RQN6|ACEA_COREF | Isocitrate lyase OS=Corynebacterium efficiens (strain DSM 44549 / YS-314 / AJ 12310 / JCM 11189 / NBRC 100395) GN=aceA PE=3 SV=4 | 26 | 193 | 7.0E-33 |
| sp|P42449|ACEA_CORGL | Isocitrate lyase OS=Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025) GN=aceA PE=1 SV=2 | 26 | 193 | 1.0E-32 |
| sp|P41554|ACEA_RHOFA | Isocitrate lyase OS=Rhodococcus fascians GN=icl PE=3 SV=1 | 23 | 193 | 2.0E-32 |
| sp|P9WKK7|ACEA_MYCTU | Isocitrate lyase OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=icl PE=1 SV=1 | 26 | 200 | 4.0E-32 |
| sp|P9WKK6|ACEA1_MYCTO | Isocitrate lyase 1 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=icl1 PE=1 SV=1 | 26 | 200 | 4.0E-32 |
| sp|H8EVV4|ACEA1_MYCTE | Isocitrate lyase 1 OS=Mycobacterium tuberculosis (strain ATCC 35801 / TMC 107 / Erdman) GN=icl1 PE=1 SV=1 | 26 | 200 | 4.0E-32 |
| sp|P0A5H4|ACEA1_MYCBO | Isocitrate lyase 1 OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=icl PE=3 SV=1 | 26 | 200 | 4.0E-32 |
| sp|Q9K9H0|ACEA_BACHD | Isocitrate lyase OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) GN=aceA PE=3 SV=1 | 26 | 200 | 2.0E-30 |
| sp|O07717|ACEAB_MYCTU | Putative isocitrate lyase subunit B OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=aceAb PE=3 SV=1 | 20 | 199 | 2.0E-30 |
| sp|Q8VJU4|ACEA2_MYCTO | Isocitrate lyase 2 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=icl2 PE=1 SV=2 | 21 | 199 | 2.0E-29 |
| sp|H8F3R6|ACEA2_MYCTE | Isocitrate lyase 2 OS=Mycobacterium tuberculosis (strain ATCC 35801 / TMC 107 / Erdman) GN=aceAb PE=1 SV=1 | 21 | 199 | 2.0E-29 |
| sp|Q7TZA8|ACEA2_MYCBO | Isocitrate lyase 2 OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=aceA PE=3 SV=1 | 21 | 199 | 2.0E-29 |
| sp|Q10663|GCP_CAEEL | Bifunctional glyoxylate cycle protein OS=Caenorhabditis elegans GN=icl-1 PE=1 SV=2 | 13 | 200 | 1.0E-28 |
| sp|P46831|ACEA_MYCLE | Isocitrate lyase OS=Mycobacterium leprae (strain TN) GN=aceA PE=3 SV=2 | 20 | 170 | 7.0E-23 |
| sp|Q9P6J1|ACEB_SCHPO | Mitochondrial 2-methylisocitrate lyase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=icl2 PE=3 SV=1 | 2 | 186 | 5.0E-17 |
| sp|P20699|ACEA_HELAN | Isocitrate lyase (Fragment) OS=Helianthus annuus PE=2 SV=1 | 143 | 198 | 2.0E-12 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0019752 | carboxylic acid metabolic process | Yes |
| GO:0004451 | isocitrate lyase activity | Yes |
| GO:0016833 | oxo-acid-lyase activity | No |
| GO:0006082 | organic acid metabolic process | No |
| GO:0043436 | oxoacid metabolic process | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0016830 | carbon-carbon lyase activity | No |
| GO:0008152 | metabolic process | No |
| GO:0003824 | catalytic activity | No |
| GO:0016829 | lyase activity | No |
| GO:0009987 | cellular process | No |
| GO:0044237 | cellular metabolic process | No |
| GO:0008150 | biological_process | No |
| GO:0003674 | molecular_function | No |
| GO:0044281 | small molecule metabolic process | No |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm | 0.7784 | 0.2649 | 0.2125 | 0.2585 | 0.2263 | 0.0794 | 0.0762 | 0.156 | 0.1389 | 0.0343 |
| Orthofinder run ID | 4 |
| Orthogroup | 124 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|1003 MGITRRRALAAHDARTPVRFDWDAPRTREGYYRFRAGMPAATKRALAFAPHADLLWVETGDPSLEVATRLGRAVR DAHPAKGLVYNLSPSFNWMAHGFTPDTLRSFVWDLAREGFVLQLVSLAGLHSTAAASHELARAFRADGMKAYVDL VQRRERDAGCDVLTHQKWSGAAYIDGILGAIQSGSSGSKSMGQGGTESQFD* |
| Coding | >Hirsu2|1003 ATGGGCATCACGCGCCGCCGCGCCCTGGCCGCCCACGACGCCCGCACGCCCGTCCGCTTCGACTGGGACGCGCCG CGGACGCGCGAGGGCTACTACCGCTTCCGCGCCGGCATGCCCGCCGCCACCAAGCGCGCCCTGGCCTTCGCGCCC CACGCCGACCTGCTTTGGGTCGAGACGGGCGACCCGAGCCTCGAGGTGGCGACGCGCCTGGGCCGCGCCGTCCGC GACGCCCACCCGGCCAAGGGCCTCGTCTACAACCTGTCGCCCTCCTTCAACTGGATGGCCCACGGCTTCACGCCC GACACGCTGCGCAGCTTCGTCTGGGACCTGGCCCGCGAGGGCTTCGTCCTGCAGCTCGTCTCCCTCGCCGGCCTG CACTCCACCGCCGCCGCCTCCCACGAGCTGGCCCGCGCCTTCCGCGCCGACGGCATGAAGGCCTACGTCGACCTC GTTCAGCGCCGCGAGCGCGACGCCGGCTGCGACGTCCTGACCCATCAGAAGTGGAGCGGCGCCGCCTACATCGAT GGCATCCTCGGCGCCATCCAGAGCGGCAGCTCGGGCAGCAAGAGCATGGGCCAGGGCGGCACCGAGAGCCAGTTT GACTGA |
| Transcript | >Hirsu2|1003 ATGGGCATCACGCGCCGCCGCGCCCTGGCCGCCCACGACGCCCGCACGCCCGTCCGCTTCGACTGGGACGCGCCG CGGACGCGCGAGGGCTACTACCGCTTCCGCGCCGGCATGCCCGCCGCCACCAAGCGCGCCCTGGCCTTCGCGCCC CACGCCGACCTGCTTTGGGTCGAGACGGGCGACCCGAGCCTCGAGGTGGCGACGCGCCTGGGCCGCGCCGTCCGC GACGCCCACCCGGCCAAGGGCCTCGTCTACAACCTGTCGCCCTCCTTCAACTGGATGGCCCACGGCTTCACGCCC GACACGCTGCGCAGCTTCGTCTGGGACCTGGCCCGCGAGGGCTTCGTCCTGCAGCTCGTCTCCCTCGCCGGCCTG CACTCCACCGCCGCCGCCTCCCACGAGCTGGCCCGCGCCTTCCGCGCCGACGGCATGAAGGCCTACGTCGACCTC GTTCAGCGCCGCGAGCGCGACGCCGGCTGCGACGTCCTGACCCATCAGAAGTGGAGCGGCGCCGCCTACATCGAT GGCATCCTCGGCGCCATCCAGAGCGGCAGCTCGGGCAGCAAGAGCATGGGCCAGGGCGGCACCGAGAGCCAGTTT GACTGA |
| Gene | >Hirsu2|1003 ATGGGCATCACGCGCCGCCGCGCCCTGGCCGCCCACGACGCCCGCACGCCCGTCCGCTTCGACTGGGACGCGCCG CGGACGCGCGAGGGCTACTACCGCTTCCGCGCCGGCATGCCCGCCGCCACCAAGCGCGCCCTGGCCTTCGCGCCC CACGCCGACCTGCTTTGGGTCGAGACGGGCGACCCGAGCCTCGAGGTGGCGACGCGCCTGGGCCGCGCCGTCCGC GACGCCCACCCGGCCAAGGGCCTCGTCTACAACCTGTCGCCCTCCTTCAACTGGATGGCCCACGGCTTCACGCCC GACACGCTGCGCAGCTTCGTCTGGGACCTGGCCCGCGAGGGCTTCGTCCTGCAGCTCGTCTCCCTCGCCGGCCTG CACTCCACCGCCGCCGCCTCCCACGAGCTGGCCCGCGCCTTCCGCGCCGACGGCATGAAGGCCTACGTCGACCTC GTTCAGCGCCGCGAGCGCGACGCCGGCTGCGACGTCCTGACCCATCAGAAGTGGAGCGGCGCCGCCTACATCGAT GGCATCCTCGGCGCCATCCAGAGCGGCAGCTCGGGCAGCAAGAGCATGGGCCAGGGCGGCACCGAGAGCCAGTTT GACTGA |