© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|10027 |
| Gene name | |
| Location | Contig_777:8682..10194 |
| Strand | + |
| Gene length (bp) | 1512 |
| Transcript length (bp) | 1140 |
| Coding sequence length (bp) | 1140 |
| Protein length (aa) | 380 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 69 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 34 | 56 | 22 |
| 2 | 69 | 91 | 22 |
| 3 | 101 | 123 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|10027 MFVVSRKFHSSFGIPGTEVHGTYMEQKTEQGRGWEWWPSVFWQLFWAWIVAPVILWRARHLRDTQGWRAQTIACC LSGLHAAPMWLIALYAQSMAPINNYFIPPQWIAVSIMMIEIFTIFIPCWEVRKQQSLCQETLDSIARWESRQKSA HCGKSLTSAGSNGSWIMGRGKAASISSSGNGSILTMDALEHTLAKNPEPLQHFSALRDFSGENIAFLTRVREWRA TYLVQPQQQGRESSSSSSEKEDPSTQTLLSRDCFESALRIYMDFISSNSAEFQVNLSSQDFKNLQAVFEPAARAV YGDCRRTPDPATPFDDVPRHDGSVDHVRYGGDIPDLFSDTVFDDSEMSIKYLVLTNTWPKFIKERRSFDTASSVE AARP* |
| Coding | >Hirsu2|10027 ATGTTCGTCGTCTCGCGCAAGTTCCACTCGTCCTTCGGCATCCCCGGCACCGAGGTCCACGGCACCTACATGGAG CAGAAGACGGAGCAGGGTCGGGGCTGGGAATGGTGGCCGTCCGTCTTCTGGCAGCTCTTCTGGGCCTGGATCGTC GCCCCCGTCATCCTGTGGCGCGCCCGGCATCTGCGCGACACCCAGGGCTGGCGAGCCCAGACGATCGCCTGCTGT CTGTCAGGGCTTCACGCCGCTCCCATGTGGCTCATCGCTCTCTACGCCCAAAGCATGGCCCCCATCAACAACTAC TTTATCCCCCCGCAATGGATCGCCGTCTCGATCATGATGATCGAGATCTTCACCATCTTCATCCCCTGCTGGGAG GTGCGCAAGCAGCAGTCGCTGTGCCAGGAGACGCTCGACTCGATCGCGCGGTGGGAGTCGCGGCAGAAGTCGGCG CACTGCGGCAAGTCGCTGACCTCGGCCGGCTCCAACGGGTCGTGGATCATGGGCCGCGGCAAGGCGGCGTCCATC AGCAGCTCGGGCAACGGCAGCATCCTGACCATGGACGCGCTCGAGCACACGCTGGCCAAGAACCCGGAGCCGCTG CAGCACTTCTCGGCCCTGCGCGACTTCTCGGGCGAGAACATCGCCTTCCTGACGCGCGTGCGCGAGTGGCGGGCC ACCTATCTCGTGCAGCCGCAGCAGCAGGGCCGCGAGTCGTCGTCGTCGTCGTCGGAAAAGGAGGACCCGTCGACG CAGACGCTGCTGTCGCGCGACTGCTTCGAGAGCGCGCTGCGCATCTACATGGACTTCATCAGCAGCAACAGCGCC GAGTTCCAGGTCAACCTGTCGTCGCAGGACTTCAAGAACCTGCAGGCCGTCTTCGAGCCGGCCGCCCGCGCCGTC TACGGCGACTGCCGGAGGACGCCCGACCCGGCCACGCCCTTCGACGACGTGCCGCGCCACGACGGCTCCGTCGAC CACGTCCGCTACGGCGGCGACATCCCCGACCTCTTCTCCGACACCGTCTTCGACGACTCCGAGATGAGCATCAAG TACCTGGTCCTGACCAACACCTGGCCCAAGTTCATCAAGGAGAGGCGCTCCTTCGACACCGCCAGCAGCGTCGAG GCTGCCAGGCCGTGA |
| Transcript | >Hirsu2|10027 ATGTTCGTCGTCTCGCGCAAGTTCCACTCGTCCTTCGGCATCCCCGGCACCGAGGTCCACGGCACCTACATGGAG CAGAAGACGGAGCAGGGTCGGGGCTGGGAATGGTGGCCGTCCGTCTTCTGGCAGCTCTTCTGGGCCTGGATCGTC GCCCCCGTCATCCTGTGGCGCGCCCGGCATCTGCGCGACACCCAGGGCTGGCGAGCCCAGACGATCGCCTGCTGT CTGTCAGGGCTTCACGCCGCTCCCATGTGGCTCATCGCTCTCTACGCCCAAAGCATGGCCCCCATCAACAACTAC TTTATCCCCCCGCAATGGATCGCCGTCTCGATCATGATGATCGAGATCTTCACCATCTTCATCCCCTGCTGGGAG GTGCGCAAGCAGCAGTCGCTGTGCCAGGAGACGCTCGACTCGATCGCGCGGTGGGAGTCGCGGCAGAAGTCGGCG CACTGCGGCAAGTCGCTGACCTCGGCCGGCTCCAACGGGTCGTGGATCATGGGCCGCGGCAAGGCGGCGTCCATC AGCAGCTCGGGCAACGGCAGCATCCTGACCATGGACGCGCTCGAGCACACGCTGGCCAAGAACCCGGAGCCGCTG CAGCACTTCTCGGCCCTGCGCGACTTCTCGGGCGAGAACATCGCCTTCCTGACGCGCGTGCGCGAGTGGCGGGCC ACCTATCTCGTGCAGCCGCAGCAGCAGGGCCGCGAGTCGTCGTCGTCGTCGTCGGAAAAGGAGGACCCGTCGACG CAGACGCTGCTGTCGCGCGACTGCTTCGAGAGCGCGCTGCGCATCTACATGGACTTCATCAGCAGCAACAGCGCC GAGTTCCAGGTCAACCTGTCGTCGCAGGACTTCAAGAACCTGCAGGCCGTCTTCGAGCCGGCCGCCCGCGCCGTC TACGGCGACTGCCGGAGGACGCCCGACCCGGCCACGCCCTTCGACGACGTGCCGCGCCACGACGGCTCCGTCGAC CACGTCCGCTACGGCGGCGACATCCCCGACCTCTTCTCCGACACCGTCTTCGACGACTCCGAGATGAGCATCAAG TACCTGGTCCTGACCAACACCTGGCCCAAGTTCATCAAGGAGAGGCGCTCCTTCGACACCGCCAGCAGCGTCGAG GCTGCCAGGCCGTGA |
| Gene | >Hirsu2|10027 ATGTTCGTCGTCTCGCGCAAGTTCCACTCGTCCTTCGGCATCCCCGGCACCGAGGTCCACGGCACCTACATGGAG CAGAAGACGGAGCAGGGTCGGGGCTGGGAATGGTACGCGTCTCCGGCGGCTTCCGCCGTTTCGACGACTGTTTTC TGGGCGCAGAACGGCTGACTCTGTTCCTCCTCCCTCGCAGGTGGCCGTCCGTCTTCTGGCAGCTCTTCTGGGCCT GGATCGTCGCCCCCGTCATCCTGTGGCGCGCCCGGCATCTGCGCGACACCCAGGGCTGGCGAGCCCAGACGATCG CCTGCTGTCTGTCAGGGTGAGTCCTTGCTTGGCCCTGTCTCTTTCTACGGCACCACACGATCACTGGGCGGCGGT ATACTGGAGACGAGAGAGTCATGAGAGATGGGACCGCCGAGGATGATGAGGGGAGAGAGAGGAAGATGACGAGAG GGCCGCTTCATGCTCACTCAACTCGGGACTGGAAAACTGACGGGCCCTCCAGGCTTCACGCCGCTCCCATGTGGC TCATCGCTCTCTACGCCCAAAGCATGGCCCCCATCAACAACTACTTTATCCCCCCGCAATGGTGAGTCTCGGATC GTTTGCCTCTCCCGTCGGTCGTCGGACGATATCTGTTTGTTGTTGTTGTTGTTGTGCCGGGCTGACGGAGGGAAA CTGCCGGGTCGCAGGATCGCCGTCTCGATCATGATGATCGAGATCTTCACCATCTTCATCCCCTGCTGGGAGGTG CGCAAGCAGCAGTCGCTGTGCCAGGAGACGCTCGACTCGATCGCGCGGTGGGAGTCGCGGCAGAAGTCGGCGCAC TGCGGCAAGTCGCTGACCTCGGCCGGCTCCAACGGGTCGTGGATCATGGGCCGCGGCAAGGCGGCGTCCATCAGC AGCTCGGGCAACGGCAGCATCCTGACCATGGACGCGCTCGAGCACACGCTGGCCAAGAACCCGGAGCCGCTGCAG CACTTCTCGGCCCTGCGCGACTTCTCGGGCGAGAACATCGCCTTCCTGACGCGCGTGCGCGAGTGGCGGGCCACC TATCTCGTGCAGCCGCAGCAGCAGGGCCGCGAGTCGTCGTCGTCGTCGTCGGAAAAGGAGGACCCGTCGACGCAG ACGCTGCTGTCGCGCGACTGCTTCGAGAGCGCGCTGCGCATCTACATGGACTTCATCAGCAGCAACAGCGCCGAG TTCCAGGTCAACCTGTCGTCGCAGGACTTCAAGAACCTGCAGGCCGTCTTCGAGCCGGCCGCCCGCGCCGTCTAC GGCGACTGCCGGAGGACGCCCGACCCGGCCACGCCCTTCGACGACGTGCCGCGCCACGACGGCTCCGTCGACCAC GTCCGCTACGGCGGCGACATCCCCGACCTCTTCTCCGACACCGTCTTCGACGACTCCGAGATGAGCATCAAGTAC CTGGTCCTGACCAACACCTGGCCCAAGTTCATCAAGGAGAGGCGCTCCTTCGACACCGCCAGCAGCGTCGAGGCT GCCAGGCCGTGA |