Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|10027
Gene name
LocationContig_777:8682..10194
Strand+
Gene length (bp)1512
Transcript length (bp)1140
Coding sequence length (bp)1140
Protein length (aa) 380

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 69 0.5

Transmembrane Domains

Domain # Start End Length
1 34 56 22
2 69 91 22
3 101 123 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|10027
MFVVSRKFHSSFGIPGTEVHGTYMEQKTEQGRGWEWWPSVFWQLFWAWIVAPVILWRARHLRDTQGWRAQTIACC
LSGLHAAPMWLIALYAQSMAPINNYFIPPQWIAVSIMMIEIFTIFIPCWEVRKQQSLCQETLDSIARWESRQKSA
HCGKSLTSAGSNGSWIMGRGKAASISSSGNGSILTMDALEHTLAKNPEPLQHFSALRDFSGENIAFLTRVREWRA
TYLVQPQQQGRESSSSSSEKEDPSTQTLLSRDCFESALRIYMDFISSNSAEFQVNLSSQDFKNLQAVFEPAARAV
YGDCRRTPDPATPFDDVPRHDGSVDHVRYGGDIPDLFSDTVFDDSEMSIKYLVLTNTWPKFIKERRSFDTASSVE
AARP*
Coding >Hirsu2|10027
ATGTTCGTCGTCTCGCGCAAGTTCCACTCGTCCTTCGGCATCCCCGGCACCGAGGTCCACGGCACCTACATGGAG
CAGAAGACGGAGCAGGGTCGGGGCTGGGAATGGTGGCCGTCCGTCTTCTGGCAGCTCTTCTGGGCCTGGATCGTC
GCCCCCGTCATCCTGTGGCGCGCCCGGCATCTGCGCGACACCCAGGGCTGGCGAGCCCAGACGATCGCCTGCTGT
CTGTCAGGGCTTCACGCCGCTCCCATGTGGCTCATCGCTCTCTACGCCCAAAGCATGGCCCCCATCAACAACTAC
TTTATCCCCCCGCAATGGATCGCCGTCTCGATCATGATGATCGAGATCTTCACCATCTTCATCCCCTGCTGGGAG
GTGCGCAAGCAGCAGTCGCTGTGCCAGGAGACGCTCGACTCGATCGCGCGGTGGGAGTCGCGGCAGAAGTCGGCG
CACTGCGGCAAGTCGCTGACCTCGGCCGGCTCCAACGGGTCGTGGATCATGGGCCGCGGCAAGGCGGCGTCCATC
AGCAGCTCGGGCAACGGCAGCATCCTGACCATGGACGCGCTCGAGCACACGCTGGCCAAGAACCCGGAGCCGCTG
CAGCACTTCTCGGCCCTGCGCGACTTCTCGGGCGAGAACATCGCCTTCCTGACGCGCGTGCGCGAGTGGCGGGCC
ACCTATCTCGTGCAGCCGCAGCAGCAGGGCCGCGAGTCGTCGTCGTCGTCGTCGGAAAAGGAGGACCCGTCGACG
CAGACGCTGCTGTCGCGCGACTGCTTCGAGAGCGCGCTGCGCATCTACATGGACTTCATCAGCAGCAACAGCGCC
GAGTTCCAGGTCAACCTGTCGTCGCAGGACTTCAAGAACCTGCAGGCCGTCTTCGAGCCGGCCGCCCGCGCCGTC
TACGGCGACTGCCGGAGGACGCCCGACCCGGCCACGCCCTTCGACGACGTGCCGCGCCACGACGGCTCCGTCGAC
CACGTCCGCTACGGCGGCGACATCCCCGACCTCTTCTCCGACACCGTCTTCGACGACTCCGAGATGAGCATCAAG
TACCTGGTCCTGACCAACACCTGGCCCAAGTTCATCAAGGAGAGGCGCTCCTTCGACACCGCCAGCAGCGTCGAG
GCTGCCAGGCCGTGA
Transcript >Hirsu2|10027
ATGTTCGTCGTCTCGCGCAAGTTCCACTCGTCCTTCGGCATCCCCGGCACCGAGGTCCACGGCACCTACATGGAG
CAGAAGACGGAGCAGGGTCGGGGCTGGGAATGGTGGCCGTCCGTCTTCTGGCAGCTCTTCTGGGCCTGGATCGTC
GCCCCCGTCATCCTGTGGCGCGCCCGGCATCTGCGCGACACCCAGGGCTGGCGAGCCCAGACGATCGCCTGCTGT
CTGTCAGGGCTTCACGCCGCTCCCATGTGGCTCATCGCTCTCTACGCCCAAAGCATGGCCCCCATCAACAACTAC
TTTATCCCCCCGCAATGGATCGCCGTCTCGATCATGATGATCGAGATCTTCACCATCTTCATCCCCTGCTGGGAG
GTGCGCAAGCAGCAGTCGCTGTGCCAGGAGACGCTCGACTCGATCGCGCGGTGGGAGTCGCGGCAGAAGTCGGCG
CACTGCGGCAAGTCGCTGACCTCGGCCGGCTCCAACGGGTCGTGGATCATGGGCCGCGGCAAGGCGGCGTCCATC
AGCAGCTCGGGCAACGGCAGCATCCTGACCATGGACGCGCTCGAGCACACGCTGGCCAAGAACCCGGAGCCGCTG
CAGCACTTCTCGGCCCTGCGCGACTTCTCGGGCGAGAACATCGCCTTCCTGACGCGCGTGCGCGAGTGGCGGGCC
ACCTATCTCGTGCAGCCGCAGCAGCAGGGCCGCGAGTCGTCGTCGTCGTCGTCGGAAAAGGAGGACCCGTCGACG
CAGACGCTGCTGTCGCGCGACTGCTTCGAGAGCGCGCTGCGCATCTACATGGACTTCATCAGCAGCAACAGCGCC
GAGTTCCAGGTCAACCTGTCGTCGCAGGACTTCAAGAACCTGCAGGCCGTCTTCGAGCCGGCCGCCCGCGCCGTC
TACGGCGACTGCCGGAGGACGCCCGACCCGGCCACGCCCTTCGACGACGTGCCGCGCCACGACGGCTCCGTCGAC
CACGTCCGCTACGGCGGCGACATCCCCGACCTCTTCTCCGACACCGTCTTCGACGACTCCGAGATGAGCATCAAG
TACCTGGTCCTGACCAACACCTGGCCCAAGTTCATCAAGGAGAGGCGCTCCTTCGACACCGCCAGCAGCGTCGAG
GCTGCCAGGCCGTGA
Gene >Hirsu2|10027
ATGTTCGTCGTCTCGCGCAAGTTCCACTCGTCCTTCGGCATCCCCGGCACCGAGGTCCACGGCACCTACATGGAG
CAGAAGACGGAGCAGGGTCGGGGCTGGGAATGGTACGCGTCTCCGGCGGCTTCCGCCGTTTCGACGACTGTTTTC
TGGGCGCAGAACGGCTGACTCTGTTCCTCCTCCCTCGCAGGTGGCCGTCCGTCTTCTGGCAGCTCTTCTGGGCCT
GGATCGTCGCCCCCGTCATCCTGTGGCGCGCCCGGCATCTGCGCGACACCCAGGGCTGGCGAGCCCAGACGATCG
CCTGCTGTCTGTCAGGGTGAGTCCTTGCTTGGCCCTGTCTCTTTCTACGGCACCACACGATCACTGGGCGGCGGT
ATACTGGAGACGAGAGAGTCATGAGAGATGGGACCGCCGAGGATGATGAGGGGAGAGAGAGGAAGATGACGAGAG
GGCCGCTTCATGCTCACTCAACTCGGGACTGGAAAACTGACGGGCCCTCCAGGCTTCACGCCGCTCCCATGTGGC
TCATCGCTCTCTACGCCCAAAGCATGGCCCCCATCAACAACTACTTTATCCCCCCGCAATGGTGAGTCTCGGATC
GTTTGCCTCTCCCGTCGGTCGTCGGACGATATCTGTTTGTTGTTGTTGTTGTTGTGCCGGGCTGACGGAGGGAAA
CTGCCGGGTCGCAGGATCGCCGTCTCGATCATGATGATCGAGATCTTCACCATCTTCATCCCCTGCTGGGAGGTG
CGCAAGCAGCAGTCGCTGTGCCAGGAGACGCTCGACTCGATCGCGCGGTGGGAGTCGCGGCAGAAGTCGGCGCAC
TGCGGCAAGTCGCTGACCTCGGCCGGCTCCAACGGGTCGTGGATCATGGGCCGCGGCAAGGCGGCGTCCATCAGC
AGCTCGGGCAACGGCAGCATCCTGACCATGGACGCGCTCGAGCACACGCTGGCCAAGAACCCGGAGCCGCTGCAG
CACTTCTCGGCCCTGCGCGACTTCTCGGGCGAGAACATCGCCTTCCTGACGCGCGTGCGCGAGTGGCGGGCCACC
TATCTCGTGCAGCCGCAGCAGCAGGGCCGCGAGTCGTCGTCGTCGTCGTCGGAAAAGGAGGACCCGTCGACGCAG
ACGCTGCTGTCGCGCGACTGCTTCGAGAGCGCGCTGCGCATCTACATGGACTTCATCAGCAGCAACAGCGCCGAG
TTCCAGGTCAACCTGTCGTCGCAGGACTTCAAGAACCTGCAGGCCGTCTTCGAGCCGGCCGCCCGCGCCGTCTAC
GGCGACTGCCGGAGGACGCCCGACCCGGCCACGCCCTTCGACGACGTGCCGCGCCACGACGGCTCCGTCGACCAC
GTCCGCTACGGCGGCGACATCCCCGACCTCTTCTCCGACACCGTCTTCGACGACTCCGAGATGAGCATCAAGTAC
CTGGTCCTGACCAACACCTGGCCCAAGTTCATCAAGGAGAGGCGCTCCTTCGACACCGCCAGCAGCGTCGAGGCT
GCCAGGCCGTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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