© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|10016 |
| Gene name | |
| Location | Contig_775:9686..10355 |
| Strand | - |
| Gene length (bp) | 669 |
| Transcript length (bp) | 669 |
| Coding sequence length (bp) | 669 |
| Protein length (aa) | 223 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13193 | AMP-binding_C | AMP-binding enzyme C-terminal domain | 3.9E-10 | 67 | 138 |
| PF00501 | AMP-binding | AMP-binding enzyme | 6.5E-09 | 12 | 58 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q8J0E9|CEFD1_ACRCH | Isopenicillin N epimerase component 1 OS=Acremonium chrysogenum GN=cefD1 PE=3 SV=1 | 15 | 215 | 1.0E-40 |
| sp|O42633|FAT1_COCHE | Fatty acid transporter protein OS=Cochliobolus heterostrophus GN=FAT1 PE=3 SV=1 | 4 | 222 | 7.0E-38 |
| sp|O14975|S27A2_HUMAN | Very long-chain acyl-CoA synthetase OS=Homo sapiens GN=SLC27A2 PE=1 SV=2 | 13 | 222 | 5.0E-33 |
| sp|Q5K4L6|S27A3_HUMAN | Long-chain fatty acid transport protein 3 OS=Homo sapiens GN=SLC27A3 PE=2 SV=3 | 13 | 162 | 2.0E-32 |
| sp|Q9Y2P4|S27A6_HUMAN | Long-chain fatty acid transport protein 6 OS=Homo sapiens GN=SLC27A6 PE=2 SV=1 | 1 | 162 | 6.0E-32 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q8J0E9|CEFD1_ACRCH | Isopenicillin N epimerase component 1 OS=Acremonium chrysogenum GN=cefD1 PE=3 SV=1 | 15 | 215 | 1.0E-40 |
| sp|O42633|FAT1_COCHE | Fatty acid transporter protein OS=Cochliobolus heterostrophus GN=FAT1 PE=3 SV=1 | 4 | 222 | 7.0E-38 |
| sp|O14975|S27A2_HUMAN | Very long-chain acyl-CoA synthetase OS=Homo sapiens GN=SLC27A2 PE=1 SV=2 | 13 | 222 | 5.0E-33 |
| sp|Q5K4L6|S27A3_HUMAN | Long-chain fatty acid transport protein 3 OS=Homo sapiens GN=SLC27A3 PE=2 SV=3 | 13 | 162 | 2.0E-32 |
| sp|Q9Y2P4|S27A6_HUMAN | Long-chain fatty acid transport protein 6 OS=Homo sapiens GN=SLC27A6 PE=2 SV=1 | 1 | 162 | 6.0E-32 |
| sp|P97524|S27A2_RAT | Very long-chain acyl-CoA synthetase OS=Rattus norvegicus GN=Slc27a2 PE=1 SV=1 | 16 | 222 | 8.0E-32 |
| sp|O35488|S27A2_MOUSE | Very long-chain acyl-CoA synthetase OS=Mus musculus GN=Slc27a2 PE=1 SV=2 | 16 | 162 | 4.0E-31 |
| sp|Q6P1M0|S27A4_HUMAN | Long-chain fatty acid transport protein 4 OS=Homo sapiens GN=SLC27A4 PE=1 SV=1 | 10 | 222 | 5.0E-31 |
| sp|Q5RDY4|S27A4_PONAB | Long-chain fatty acid transport protein 4 OS=Pongo abelii GN=SLC27A4 PE=2 SV=1 | 10 | 222 | 1.0E-30 |
| sp|O88561|S27A3_MOUSE | Long-chain fatty acid transport protein 3 OS=Mus musculus GN=Slc27a3 PE=1 SV=2 | 13 | 162 | 2.0E-30 |
| sp|Q4R3Y4|S27A4_MACFA | Long-chain fatty acid transport protein 4 OS=Macaca fascicularis GN=SLC27A4 PE=2 SV=2 | 10 | 168 | 4.0E-29 |
| sp|Q91VE0|S27A4_MOUSE | Long-chain fatty acid transport protein 4 OS=Mus musculus GN=Slc27a4 PE=1 SV=1 | 10 | 168 | 5.0E-29 |
| sp|Q60714|S27A1_MOUSE | Long-chain fatty acid transport protein 1 OS=Mus musculus GN=Slc27a1 PE=1 SV=1 | 10 | 165 | 1.0E-25 |
| sp|Q3ZKN0|S27A1_BOVIN | Long-chain fatty acid transport protein 1 OS=Bos taurus GN=SLC27A1 PE=2 SV=1 | 10 | 165 | 7.0E-25 |
| sp|P97849|S27A1_RAT | Long-chain fatty acid transport protein 1 OS=Rattus norvegicus GN=Slc27a1 PE=2 SV=1 | 10 | 165 | 2.0E-24 |
| sp|Q6PCB7|S27A1_HUMAN | Long-chain fatty acid transport protein 1 OS=Homo sapiens GN=SLC27A1 PE=2 SV=1 | 10 | 165 | 2.0E-24 |
| sp|P38225|FAT1_YEAST | Very long-chain fatty acid transport protein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FAT1 PE=1 SV=2 | 16 | 163 | 2.0E-24 |
| sp|Q9Y2P5|S27A5_HUMAN | Bile acyl-CoA synthetase OS=Homo sapiens GN=SLC27A5 PE=1 SV=1 | 19 | 163 | 4.0E-24 |
| sp|Q9ES38|S27A5_RAT | Bile acyl-CoA synthetase OS=Rattus norvegicus GN=Slc27a5 PE=1 SV=1 | 16 | 163 | 6.0E-24 |
| sp|Q4LDG0|S27A5_MOUSE | Bile acyl-CoA synthetase OS=Mus musculus GN=Slc27a5 PE=1 SV=2 | 14 | 163 | 1.0E-23 |
| sp|Q08787|SRFAC_BACSU | Surfactin synthase subunit 3 OS=Bacillus subtilis (strain 168) GN=srfAC PE=1 SV=2 | 16 | 155 | 8.0E-10 |
| sp|Q9FFE9|AAE6_ARATH | Probable acyl-activating enzyme 6 OS=Arabidopsis thaliana GN=AAE6 PE=2 SV=1 | 31 | 163 | 2.0E-09 |
| sp|A0R5G1|ACSA_MYCS2 | Acetyl-coenzyme A synthetase OS=Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) GN=acsA PE=3 SV=1 | 31 | 157 | 2.0E-09 |
| sp|P27206|SRFAA_BACSU | Surfactin synthase subunit 1 OS=Bacillus subtilis (strain 168) GN=srfAA PE=1 SV=4 | 13 | 138 | 2.0E-09 |
| sp|Q9SEY5|AAE2_ARATH | Probable acyl-activating enzyme 2 OS=Arabidopsis thaliana GN=AAE2 PE=2 SV=1 | 31 | 156 | 4.0E-09 |
| sp|Q9LQS1|AAE8_ARATH | Probable acyl-activating enzyme 8 OS=Arabidopsis thaliana GN=AAE8 PE=2 SV=1 | 22 | 157 | 4.0E-09 |
| sp|Q9LPK6|AEE9_ARATH | Probable acyl-activating enzyme 9 OS=Arabidopsis thaliana GN=AEE9 PE=2 SV=1 | 10 | 157 | 6.0E-09 |
| sp|Q9FFE6|AAE5_ARATH | Probable acyl-activating enzyme 5, peroxisomal OS=Arabidopsis thaliana GN=AAE5 PE=2 SV=1 | 31 | 165 | 7.0E-09 |
| sp|Q8VZF1|AEE7_ARATH | Acetate/butyrate--CoA ligase AAE7, peroxisomal OS=Arabidopsis thaliana GN=AAE7 PE=1 SV=1 | 31 | 166 | 2.0E-08 |
| sp|O80658|AAE4_ARATH | Probable acyl-activating enzyme 4 OS=Arabidopsis thaliana GN=AEE4 PE=2 SV=1 | 10 | 157 | 3.0E-08 |
| sp|P86831|CBCL1_ARTSP | 4-chlorobenzoate--CoA ligase OS=Arthrobacter sp. GN=fcbA1 PE=1 SV=1 | 4 | 86 | 3.0E-08 |
| sp|P86832|CBCL2_ARTSP | 4-chlorobenzoate--CoA ligase OS=Arthrobacter sp. GN=fcbA2 PE=1 SV=1 | 4 | 86 | 3.0E-08 |
| sp|O30408|TYCB_BREPA | Tyrocidine synthase 2 OS=Brevibacillus parabrevis GN=tycB PE=3 SV=1 | 12 | 132 | 4.0E-08 |
| sp|F4HUK6|AAE1_ARATH | Probable acyl-activating enzyme 1, peroxisomal OS=Arabidopsis thaliana GN=AAE1 PE=2 SV=1 | 22 | 156 | 5.0E-08 |
| sp|Q5SKN9|LCFCS_THET8 | Long-chain-fatty-acid--CoA ligase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=TTHA0604 PE=1 SV=1 | 29 | 90 | 5.0E-08 |
| sp|Q9LPK7|AEE10_ARATH | Probable acyl-activating enzyme 10 OS=Arabidopsis thaliana GN=AEE10 PE=2 SV=1 | 10 | 157 | 6.0E-08 |
| sp|O30408|TYCB_BREPA | Tyrocidine synthase 2 OS=Brevibacillus parabrevis GN=tycB PE=3 SV=1 | 12 | 144 | 1.0E-07 |
| sp|Q1AXQ5|ACSA_RUBXD | Acetyl-coenzyme A synthetase OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=acsA PE=3 SV=1 | 28 | 156 | 1.0E-07 |
| sp|Q9C9G2|AEE22_ARATH | Probable acyl-activating enzyme 22 OS=Arabidopsis thaliana GN=AEE22 PE=3 SV=1 | 8 | 139 | 3.0E-07 |
| sp|P94459|PPSD_BACSU | Plipastatin synthase subunit D OS=Bacillus subtilis (strain 168) GN=ppsD PE=1 SV=2 | 12 | 83 | 4.0E-07 |
| sp|P39845|PPSA_BACSU | Plipastatin synthase subunit A OS=Bacillus subtilis (strain 168) GN=ppsA PE=1 SV=2 | 12 | 83 | 4.0E-07 |
| sp|P0C064|GRSB_BREBE | Gramicidin S synthase 2 OS=Brevibacillus brevis GN=grsB PE=1 SV=2 | 12 | 132 | 5.0E-07 |
| sp|P0C063|GRSB_ANEMI | Gramicidin S synthase 2 OS=Aneurinibacillus migulanus GN=grsB PE=3 SV=2 | 12 | 132 | 5.0E-07 |
| sp|O68006|BACA_BACLI | Bacitracin synthase 1 OS=Bacillus licheniformis GN=bacA PE=3 SV=1 | 12 | 132 | 6.0E-07 |
| sp|Q9SS01|AAE20_ARATH | Benzoate--CoA ligase, peroxisomal OS=Arabidopsis thaliana GN=AAE20 PE=1 SV=1 | 8 | 139 | 6.0E-07 |
| sp|P09095|TYCA_BREPA | Tyrocidine synthase 1 OS=Brevibacillus parabrevis GN=tycA PE=1 SV=2 | 12 | 132 | 8.0E-07 |
| sp|Q70LM5|LGRC_BREPA | Linear gramicidin synthase subunit C OS=Brevibacillus parabrevis GN=lgrC PE=3 SV=1 | 12 | 129 | 8.0E-07 |
| sp|Q0K844|SAUT_CUPNH | Probable sulfoacetate--CoA ligase OS=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=sauT PE=2 SV=1 | 29 | 138 | 9.0E-07 |
| sp|Q7XXL2|4CLL9_ORYSJ | 4-coumarate--CoA ligase-like 9 OS=Oryza sativa subsp. japonica GN=4CLL9 PE=2 SV=2 | 28 | 161 | 1.0E-06 |
| sp|Q9R9I9|MYCC_BACIU | Mycosubtilin synthase subunit C OS=Bacillus subtilis GN=mycC PE=3 SV=1 | 12 | 132 | 2.0E-06 |
| sp|O30409|TYCC_BREPA | Tyrocidine synthase 3 OS=Brevibacillus parabrevis GN=tycC PE=1 SV=1 | 6 | 83 | 2.0E-06 |
| sp|A9IYZ3|ACSA_BART1 | Acetyl-coenzyme A synthetase OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) GN=acsA PE=3 SV=1 | 32 | 138 | 3.0E-06 |
| sp|B7KPN8|ACSA_METC4 | Acetyl-coenzyme A synthetase OS=Methylobacterium extorquens (strain CM4 / NCIMB 13688) GN=acsA PE=3 SV=1 | 29 | 136 | 3.0E-06 |
| sp|Q7F1X5|4CLL5_ORYSJ | 4-coumarate--CoA ligase-like 5 OS=Oryza sativa subsp. japonica GN=4CLL5 PE=2 SV=1 | 31 | 128 | 3.0E-06 |
| sp|P59872|ACSA_RHOBA | Acetyl-coenzyme A synthetase OS=Rhodopirellula baltica (strain DSM 10527 / NCIMB 13988 / SH1) GN=acsA PE=3 SV=1 | 32 | 157 | 3.0E-06 |
| sp|A9W5V0|ACSA_METEP | Acetyl-coenzyme A synthetase OS=Methylobacterium extorquens (strain PA1) GN=acsA PE=3 SV=1 | 29 | 136 | 3.0E-06 |
| sp|O07610|LCFB_BACSU | Long-chain-fatty-acid--CoA ligase OS=Bacillus subtilis (strain 168) GN=lcfB PE=2 SV=2 | 29 | 157 | 3.0E-06 |
| sp|Q9R9I9|MYCC_BACIU | Mycosubtilin synthase subunit C OS=Bacillus subtilis GN=mycC PE=3 SV=1 | 12 | 138 | 4.0E-06 |
| sp|C1AA44|ACSA_GEMAT | Acetyl-coenzyme A synthetase OS=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) GN=acsA PE=3 SV=1 | 35 | 157 | 5.0E-06 |
| sp|Q5LRT0|DMDB_RUEPO | 3-methylmercaptopropionyl-CoA ligase OS=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) GN=dmdB PE=1 SV=1 | 29 | 157 | 6.0E-06 |
| sp|Q1QEB6|ACSA_PSYCK | Acetyl-coenzyme A synthetase OS=Psychrobacter cryohalolentis (strain K5) GN=acsA PE=3 SV=1 | 18 | 123 | 7.0E-06 |
| sp|Q9AJS8|3HBCL_THAAR | 3-hydroxybenzoate--CoA/4-hydroxybenzoate--CoA ligase OS=Thauera aromatica GN=hcl PE=1 SV=1 | 10 | 157 | 7.0E-06 |
| sp|Q70LM4|LGRD_BREPA | Linear gramicidin synthase subunit D OS=Brevibacillus parabrevis GN=lgrD PE=1 SV=1 | 12 | 129 | 8.0E-06 |
| sp|O30409|TYCC_BREPA | Tyrocidine synthase 3 OS=Brevibacillus parabrevis GN=tycC PE=1 SV=1 | 12 | 131 | 8.0E-06 |
| sp|P27206|SRFAA_BACSU | Surfactin synthase subunit 1 OS=Bacillus subtilis (strain 168) GN=srfAA PE=1 SV=4 | 16 | 203 | 9.0E-06 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Peroxisome | Peroxisomal targeting signal | 0.4061 | 0.4462 | 0.1487 | 0.2761 | 0.4185 | 0.0332 | 0.1861 | 0.1428 | 0.0298 | 0.9547 |
| Orthofinder run ID | 4 |
| Orthogroup | 463 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|10016 LHRAHASSTFFKPAATAAKLLRDVFRPGDVWFRTGDVVRWDADGRVFFSDRIGDTFRWKSENVSTVEVSQALGLH PAVREANVYGVALPHHDGRAGCAAVCFDPSPPGPDVLRSLADHVRARLPRYARPLFLRLVPEVGADGQTTGTNKQ QKHLLRDAGVRPGPTPCPAPPPPDSGAASGPTPDTTTTATTATTDMYWLHGDSYVPFRQDDYNALEAGRVKL* |
| Coding | >Hirsu2|10016 CTGCATCGCGCCCATGCATCGTCGACCTTCTTCAAGCCCGCCGCCACCGCCGCCAAGCTGCTGCGCGACGTCTTC CGCCCCGGCGACGTCTGGTTCCGCACCGGCGACGTCGTCCGCTGGGACGCCGACGGCCGCGTCTTTTTCTCCGAC CGCATCGGCGACACCTTCCGCTGGAAGTCGGAGAACGTCTCGACCGTCGAGGTCAGCCAGGCCCTCGGCCTGCAC CCGGCCGTCCGCGAGGCCAACGTCTACGGCGTCGCCCTGCCCCACCACGACGGCCGCGCCGGCTGCGCCGCCGTC TGCTTCGACCCGAGCCCCCCCGGCCCGGATGTCCTCCGCTCCCTCGCCGACCACGTCCGTGCCCGCCTGCCGCGC TACGCCCGCCCGCTCTTCCTGCGCCTCGTCCCGGAGGTCGGCGCCGACGGCCAGACCACCGGCACCAACAAGCAG CAGAAGCACCTCCTGCGCGACGCCGGCGTCCGCCCGGGACCCACCCCCTGCCCGGCCCCGCCACCCCCGGACTCC GGAGCCGCCTCCGGTCCGACCCCGGACACCACCACTACCGCCACCACCGCCACCACCGACATGTATTGGCTCCAC GGCGACTCCTACGTCCCCTTCCGCCAAGACGACTACAACGCCCTCGAGGCCGGTCGCGTCAAGCTCTGA |
| Transcript | >Hirsu2|10016 CTGCATCGCGCCCATGCATCGTCGACCTTCTTCAAGCCCGCCGCCACCGCCGCCAAGCTGCTGCGCGACGTCTTC CGCCCCGGCGACGTCTGGTTCCGCACCGGCGACGTCGTCCGCTGGGACGCCGACGGCCGCGTCTTTTTCTCCGAC CGCATCGGCGACACCTTCCGCTGGAAGTCGGAGAACGTCTCGACCGTCGAGGTCAGCCAGGCCCTCGGCCTGCAC CCGGCCGTCCGCGAGGCCAACGTCTACGGCGTCGCCCTGCCCCACCACGACGGCCGCGCCGGCTGCGCCGCCGTC TGCTTCGACCCGAGCCCCCCCGGCCCGGATGTCCTCCGCTCCCTCGCCGACCACGTCCGTGCCCGCCTGCCGCGC TACGCCCGCCCGCTCTTCCTGCGCCTCGTCCCGGAGGTCGGCGCCGACGGCCAGACCACCGGCACCAACAAGCAG CAGAAGCACCTCCTGCGCGACGCCGGCGTCCGCCCGGGACCCACCCCCTGCCCGGCCCCGCCACCCCCGGACTCC GGAGCCGCCTCCGGTCCGACCCCGGACACCACCACTACCGCCACCACCGCCACCACCGACATGTATTGGCTCCAC GGCGACTCCTACGTCCCCTTCCGCCAAGACGACTACAACGCCCTCGAGGCCGGTCGCGTCAAGCTCTGA |
| Gene | >Hirsu2|10016 CTGCATCGCGCCCATGCATCGTCGACCTTCTTCAAGCCCGCCGCCACCGCCGCCAAGCTGCTGCGCGACGTCTTC CGCCCCGGCGACGTCTGGTTCCGCACCGGCGACGTCGTCCGCTGGGACGCCGACGGCCGCGTCTTTTTCTCCGAC CGCATCGGCGACACCTTCCGCTGGAAGTCGGAGAACGTCTCGACCGTCGAGGTCAGCCAGGCCCTCGGCCTGCAC CCGGCCGTCCGCGAGGCCAACGTCTACGGCGTCGCCCTGCCCCACCACGACGGCCGCGCCGGCTGCGCCGCCGTC TGCTTCGACCCGAGCCCCCCCGGCCCGGATGTCCTCCGCTCCCTCGCCGACCACGTCCGTGCCCGCCTGCCGCGC TACGCCCGCCCGCTCTTCCTGCGCCTCGTCCCGGAGGTCGGCGCCGACGGCCAGACCACCGGCACCAACAAGCAG CAGAAGCACCTCCTGCGCGACGCCGGCGTCCGCCCGGGACCCACCCCCTGCCCGGCCCCGCCACCCCCGGACTCC GGAGCCGCCTCCGGTCCGACCCCGGACACCACCACTACCGCCACCACCGCCACCACCGACATGTATTGGCTCCAC GGCGACTCCTACGTCCCCTTCCGCCAAGACGACTACAACGCCCTCGAGGCCGGTCGCGTCAAGCTCTGA |