Protein ID | Hirsu2|10002 |
Gene name | |
Location | Contig_772:5144..6887 |
Strand | - |
Gene length (bp) | 1743 |
Transcript length (bp) | 1743 |
Coding sequence length (bp) | 1743 |
Protein length (aa) | 581 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.1874 | 0.0678 | 0.881 | 0.1729 | 0.1014 | 0.1059 | 0.1978 | 0.421 | 0.2797 | 0.0032 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 21 | 0.961236 |
Orthofinder run ID | 4 |
Orthogroup | 121 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|10002 MKLGAISSLIASVFVIGVACGDTAPDEDWAQRYISSLQRKIKIDWNKPPVLDDLSSDNFGLKMGLVELWSLRCHE QVRLGTRRKLVPVYVDPKHSGIVIQPNTTVYYLSTVEKSLINAPGTDNVVISVSSSTTKIDSRTENWAVGAQLGF GSIGISAEVSKTRTTEEHETKIDTITATCKAGHICRFESWTLHVLITGYCEILPLIKCDEKLWAGCFMQFQPSNR KLESYRDELCRFRGERGVRKQREIQMEACEARLPILDQSGKPVTHIVLIMEEMESSANGNNTEDRRPQVAAEVVG KENEWYLLDSGEYYRRDRDEFWDGSKQSWVSKPRAPKIWDEKKQKWILKPRVPKPDIASVIGTTPPEVPVAVRVK EHFYLLDGDEEGYRDDTNQYYSSEIEDWVSMLHRPRPNLHYFDAVSDSWVFKYWDGNGQVWSVKPGMPKYWDWEK EHYVFGTRDWDWPTKTWVYGTWYELLTGEYYRDDRDQYWDCRRDAWISKPGMRHKADLLGAIEHKPDVRPAGDVP SSGKPSADAASAADGGKRVRRKAVRSENGWFVLDNEQHYGDDTNQYWDVDQQALG* |
Coding | >Hirsu2|10002 ATGAAACTTGGTGCAATTAGCTCCTTGATTGCCAGTGTTTTCGTTATTGGGGTCGCCTGCGGTGATACGGCACCG GATGAAGACTGGGCTCAGCGCTACATTTCCTCATTGCAGCGGAAAATCAAAATAGACTGGAACAAACCACCAGTT CTTGACGACCTTTCAAGCGACAACTTTGGTCTAAAGATGGGGTTGGTCGAGTTGTGGTCTCTCAGATGTCACGAA CAAGTCCGTCTTGGCACGAGGAGAAAGCTGGTGCCAGTCTACGTCGATCCGAAGCATAGTGGTATAGTTATCCAG CCTAACACGACTGTGTATTATCTATCCACGGTGGAAAAGTCTTTGATCAACGCCCCTGGGACTGACAATGTCGTC ATATCGGTAAGCTCGTCGACCACCAAGATAGACAGCAGAACGGAAAACTGGGCGGTTGGGGCTCAGCTGGGCTTC GGAAGCATCGGAATCTCTGCAGAAGTCTCTAAAACGAGGACTACCGAGGAACATGAAACAAAGATAGACACGATC ACAGCAACTTGCAAGGCGGGCCACATCTGTCGCTTTGAGAGCTGGACGCTTCATGTTCTAATAACCGGATACTGC GAAATTTTACCACTTATCAAATGCGATGAGAAACTATGGGCTGGCTGTTTTATGCAATTTCAGCCATCGAACCGA AAATTGGAGTCTTACCGTGACGAATTATGCAGGTTCAGGGGTGAACGCGGCGTTAGGAAACAGAGAGAGATTCAG ATGGAGGCTTGCGAGGCGCGGCTTCCAATCCTCGACCAGTCCGGCAAGCCAGTCACTCACATTGTCCTGATCATG GAAGAGATGGAATCGTCTGCAAATGGGAATAACACCGAGGACCGCCGCCCGCAGGTAGCGGCTGAAGTGGTTGGG AAGGAAAACGAATGGTACTTACTAGACAGTGGCGAGTATTATAGACGCGACAGAGATGAGTTCTGGGATGGGAGC AAGCAGAGCTGGGTATCTAAGCCGCGTGCCCCCAAGATCTGGGATGAGAAGAAGCAAAAATGGATTCTCAAACCC CGCGTACCCAAGCCAGACATCGCCAGCGTCATCGGGACCACTCCGCCGGAAGTCCCGGTCGCCGTCAGAGTGAAG GAGCATTTCTACCTCCTGGATGGTGACGAGGAGGGCTACAGAGACGACACGAATCAGTATTACAGCAGCGAGATC GAGGACTGGGTTTCCATGCTACACAGGCCTAGACCTAATCTCCATTACTTCGACGCAGTGAGTGACAGCTGGGTT TTCAAGTACTGGGACGGGAACGGGCAAGTTTGGTCCGTGAAACCGGGAATGCCGAAGTATTGGGACTGGGAGAAG GAACACTATGTCTTTGGGACCCGGGACTGGGACTGGCCGACGAAAACGTGGGTCTACGGGACGTGGTACGAGCTT CTCACCGGCGAGTATTACCGGGATGACAGAGATCAGTATTGGGATTGCCGAAGAGATGCCTGGATTTCCAAACCG GGGATGAGACACAAGGCCGACCTCTTGGGGGCGATCGAGCATAAGCCGGACGTTCGGCCGGCGGGCGACGTCCCT TCTTCGGGCAAGCCGTCGGCAGATGCGGCGAGTGCGGCTGATGGTGGAAAGCGAGTTCGTCGGAAAGCCGTCCGT TCAGAGAATGGTTGGTTTGTGCTCGACAATGAGCAGCACTATGGGGATGATACGAATCAGTATTGGGACGTGGAC CAGCAAGCCTTGGGTTGA |
Transcript | >Hirsu2|10002 ATGAAACTTGGTGCAATTAGCTCCTTGATTGCCAGTGTTTTCGTTATTGGGGTCGCCTGCGGTGATACGGCACCG GATGAAGACTGGGCTCAGCGCTACATTTCCTCATTGCAGCGGAAAATCAAAATAGACTGGAACAAACCACCAGTT CTTGACGACCTTTCAAGCGACAACTTTGGTCTAAAGATGGGGTTGGTCGAGTTGTGGTCTCTCAGATGTCACGAA CAAGTCCGTCTTGGCACGAGGAGAAAGCTGGTGCCAGTCTACGTCGATCCGAAGCATAGTGGTATAGTTATCCAG CCTAACACGACTGTGTATTATCTATCCACGGTGGAAAAGTCTTTGATCAACGCCCCTGGGACTGACAATGTCGTC ATATCGGTAAGCTCGTCGACCACCAAGATAGACAGCAGAACGGAAAACTGGGCGGTTGGGGCTCAGCTGGGCTTC GGAAGCATCGGAATCTCTGCAGAAGTCTCTAAAACGAGGACTACCGAGGAACATGAAACAAAGATAGACACGATC ACAGCAACTTGCAAGGCGGGCCACATCTGTCGCTTTGAGAGCTGGACGCTTCATGTTCTAATAACCGGATACTGC GAAATTTTACCACTTATCAAATGCGATGAGAAACTATGGGCTGGCTGTTTTATGCAATTTCAGCCATCGAACCGA AAATTGGAGTCTTACCGTGACGAATTATGCAGGTTCAGGGGTGAACGCGGCGTTAGGAAACAGAGAGAGATTCAG ATGGAGGCTTGCGAGGCGCGGCTTCCAATCCTCGACCAGTCCGGCAAGCCAGTCACTCACATTGTCCTGATCATG GAAGAGATGGAATCGTCTGCAAATGGGAATAACACCGAGGACCGCCGCCCGCAGGTAGCGGCTGAAGTGGTTGGG AAGGAAAACGAATGGTACTTACTAGACAGTGGCGAGTATTATAGACGCGACAGAGATGAGTTCTGGGATGGGAGC AAGCAGAGCTGGGTATCTAAGCCGCGTGCCCCCAAGATCTGGGATGAGAAGAAGCAAAAATGGATTCTCAAACCC CGCGTACCCAAGCCAGACATCGCCAGCGTCATCGGGACCACTCCGCCGGAAGTCCCGGTCGCCGTCAGAGTGAAG GAGCATTTCTACCTCCTGGATGGTGACGAGGAGGGCTACAGAGACGACACGAATCAGTATTACAGCAGCGAGATC GAGGACTGGGTTTCCATGCTACACAGGCCTAGACCTAATCTCCATTACTTCGACGCAGTGAGTGACAGCTGGGTT TTCAAGTACTGGGACGGGAACGGGCAAGTTTGGTCCGTGAAACCGGGAATGCCGAAGTATTGGGACTGGGAGAAG GAACACTATGTCTTTGGGACCCGGGACTGGGACTGGCCGACGAAAACGTGGGTCTACGGGACGTGGTACGAGCTT CTCACCGGCGAGTATTACCGGGATGACAGAGATCAGTATTGGGATTGCCGAAGAGATGCCTGGATTTCCAAACCG GGGATGAGACACAAGGCCGACCTCTTGGGGGCGATCGAGCATAAGCCGGACGTTCGGCCGGCGGGCGACGTCCCT TCTTCGGGCAAGCCGTCGGCAGATGCGGCGAGTGCGGCTGATGGTGGAAAGCGAGTTCGTCGGAAAGCCGTCCGT TCAGAGAATGGTTGGTTTGTGCTCGACAATGAGCAGCACTATGGGGATGATACGAATCAGTATTGGGACGTGGAC CAGCAAGCCTTGGGTTGA |
Gene | >Hirsu2|10002 ATGAAACTTGGTGCAATTAGCTCCTTGATTGCCAGTGTTTTCGTTATTGGGGTCGCCTGCGGTGATACGGCACCG GATGAAGACTGGGCTCAGCGCTACATTTCCTCATTGCAGCGGAAAATCAAAATAGACTGGAACAAACCACCAGTT CTTGACGACCTTTCAAGCGACAACTTTGGTCTAAAGATGGGGTTGGTCGAGTTGTGGTCTCTCAGATGTCACGAA CAAGTCCGTCTTGGCACGAGGAGAAAGCTGGTGCCAGTCTACGTCGATCCGAAGCATAGTGGTATAGTTATCCAG CCTAACACGACTGTGTATTATCTATCCACGGTGGAAAAGTCTTTGATCAACGCCCCTGGGACTGACAATGTCGTC ATATCGGTAAGCTCGTCGACCACCAAGATAGACAGCAGAACGGAAAACTGGGCGGTTGGGGCTCAGCTGGGCTTC GGAAGCATCGGAATCTCTGCAGAAGTCTCTAAAACGAGGACTACCGAGGAACATGAAACAAAGATAGACACGATC ACAGCAACTTGCAAGGCGGGCCACATCTGTCGCTTTGAGAGCTGGACGCTTCATGTTCTAATAACCGGATACTGC GAAATTTTACCACTTATCAAATGCGATGAGAAACTATGGGCTGGCTGTTTTATGCAATTTCAGCCATCGAACCGA AAATTGGAGTCTTACCGTGACGAATTATGCAGGTTCAGGGGTGAACGCGGCGTTAGGAAACAGAGAGAGATTCAG ATGGAGGCTTGCGAGGCGCGGCTTCCAATCCTCGACCAGTCCGGCAAGCCAGTCACTCACATTGTCCTGATCATG GAAGAGATGGAATCGTCTGCAAATGGGAATAACACCGAGGACCGCCGCCCGCAGGTAGCGGCTGAAGTGGTTGGG AAGGAAAACGAATGGTACTTACTAGACAGTGGCGAGTATTATAGACGCGACAGAGATGAGTTCTGGGATGGGAGC AAGCAGAGCTGGGTATCTAAGCCGCGTGCCCCCAAGATCTGGGATGAGAAGAAGCAAAAATGGATTCTCAAACCC CGCGTACCCAAGCCAGACATCGCCAGCGTCATCGGGACCACTCCGCCGGAAGTCCCGGTCGCCGTCAGAGTGAAG GAGCATTTCTACCTCCTGGATGGTGACGAGGAGGGCTACAGAGACGACACGAATCAGTATTACAGCAGCGAGATC GAGGACTGGGTTTCCATGCTACACAGGCCTAGACCTAATCTCCATTACTTCGACGCAGTGAGTGACAGCTGGGTT TTCAAGTACTGGGACGGGAACGGGCAAGTTTGGTCCGTGAAACCGGGAATGCCGAAGTATTGGGACTGGGAGAAG GAACACTATGTCTTTGGGACCCGGGACTGGGACTGGCCGACGAAAACGTGGGTCTACGGGACGTGGTACGAGCTT CTCACCGGCGAGTATTACCGGGATGACAGAGATCAGTATTGGGATTGCCGAAGAGATGCCTGGATTTCCAAACCG GGGATGAGACACAAGGCCGACCTCTTGGGGGCGATCGAGCATAAGCCGGACGTTCGGCCGGCGGGCGACGTCCCT TCTTCGGGCAAGCCGTCGGCAGATGCGGCGAGTGCGGCTGATGGTGGAAAGCGAGTTCGTCGGAAAGCCGTCCGT TCAGAGAATGGTTGGTTTGTGCTCGACAATGAGCAGCACTATGGGGATGATACGAATCAGTATTGGGACGTGGAC CAGCAAGCCTTGGGTTGA |