© 2023 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Hirsu2|10001 |
| Gene name | |
| Location | Contig_772:1182..2958 |
| Strand | + |
| Gene length (bp) | 1776 |
| Transcript length (bp) | 1776 |
| Coding sequence length (bp) | 1776 |
| Protein length (aa) | 592 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Extracellular | Signal peptide | 0.1293 | 0.0772 | 0.9623 | 0.0991 | 0.0799 | 0.0139 | 0.1131 | 0.0512 | 0.0933 | 0.0016 |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 19 | 0.999684 |
| Orthofinder run ID | 4 |
| Orthogroup | 8363 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps subramaniannii | Hirsu2|10001 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|10001 MRYALLLASIATIQPLISALPQAPPAETPAAPPAPAGAGDGAATSTTTTTTAGAQVSETGLPQQEKKGPEEPKGP GEEPGAPPKDPSQNPSPNGVDGQNGTDAAEPLAIADGVDVNKALREALVEVLGEEAAKEVDEEADKEPQDEGGDG EGEGDGQGEGDGKGQGEGAKGQDGAETPKPAPESPESPAPPTADPPTTEPGKEEGQPQGDQPKKRGLSKRTLQAG RAGKSLNAFASASGSALAGLTGSQARFVNRFTAICIVIMRRNGGGQASGNGQTPGQGQTQTLQTGQAGKVVPHLE SFGLAAGSKVFRSMNAAVLMLVNVGVAASLSKAPQAKVRGCMGNTMTGVRGVAQSGANLKPQDLFANTTFVDNIV KDCNECRQMIQPKLQLNEVYAPKAALMAFVVYVDLDASAGGQQAGNAPPSTAPATAPATAPATPPATPNQGQPQS QSPSQEVKSLPQRFIRICMDISKKPELAPTRLDNPDRPKDVAPQQAAQVALQASQALENETKNEEVKKVTETAKQ NVQPAEDILKIVSGIFANFDFGFDQGSPAGSPPSRAGASAPGVGGTPSRAGAGAPPAAGAPVRNSC* |
| Coding | >Hirsu2|10001 ATGAGATACGCTCTCTTGCTCGCGTCGATCGCGACTATTCAGCCGTTGATCTCGGCCCTGCCTCAGGCACCACCG GCCGAAACCCCAGCCGCGCCTCCTGCGCCCGCTGGCGCTGGCGACGGTGCCGCCACAAGCACTACGACGACCACC ACGGCCGGAGCTCAAGTATCAGAGACCGGGCTCCCACAGCAGGAGAAGAAAGGGCCTGAAGAGCCGAAGGGCCCT GGAGAAGAGCCTGGGGCGCCGCCAAAGGACCCCTCCCAGAACCCCAGCCCCAACGGTGTTGACGGCCAGAATGGA ACGGATGCAGCGGAGCCTCTTGCGATCGCGGACGGCGTGGATGTGAATAAAGCACTGCGGGAGGCGCTGGTAGAA GTACTCGGTGAAGAGGCGGCAAAGGAAGTCGACGAGGAGGCTGATAAAGAACCGCAAGATGAAGGGGGTGATGGT GAGGGCGAGGGTGATGGCCAGGGCGAGGGCGATGGCAAGGGCCAGGGTGAGGGCGCGAAAGGACAAGACGGAGCG GAAACACCAAAGCCGGCGCCAGAGTCGCCAGAGTCGCCGGCGCCGCCAACAGCTGATCCTCCTACGACCGAGCCA GGGAAGGAAGAAGGTCAACCGCAGGGAGACCAGCCCAAGAAACGCGGACTATCGAAGCGGACTTTACAGGCAGGC CGGGCGGGCAAGTCGTTGAACGCATTCGCATCCGCTTCCGGCTCCGCACTCGCGGGCCTGACCGGGTCACAAGCC CGGTTCGTCAACAGATTTACGGCTATATGCATCGTAATCATGCGAAGGAACGGCGGCGGCCAGGCGTCAGGCAAC GGACAGACGCCAGGCCAAGGCCAAACGCAAACGCTACAGACAGGACAGGCGGGCAAAGTGGTACCCCATCTCGAG AGCTTCGGCCTGGCTGCCGGCTCAAAAGTGTTCCGCTCCATGAATGCGGCAGTCCTGATGCTGGTCAACGTCGGG GTTGCAGCCTCTTTGTCTAAAGCGCCACAAGCCAAGGTCAGGGGATGCATGGGAAACACTATGACGGGTGTCCGA GGTGTGGCGCAGTCCGGGGCCAATCTCAAACCCCAGGACTTGTTTGCCAACACGACTTTCGTCGACAACATCGTC AAGGACTGCAACGAGTGTCGACAAATGATTCAGCCCAAACTGCAATTGAACGAGGTGTACGCCCCAAAAGCCGCC CTCATGGCCTTCGTCGTTTATGTCGATTTGGACGCGAGCGCTGGAGGCCAGCAGGCAGGAAACGCGCCGCCTTCC ACAGCCCCCGCCACAGCCCCCGCCACAGCCCCCGCCACACCCCCCGCCACACCCAACCAAGGCCAGCCGCAGTCG CAGTCGCCGTCGCAGGAAGTCAAGTCTCTGCCCCAACGCTTCATCCGCATATGCATGGATATCTCCAAGAAGCCC GAGCTGGCTCCTACCCGACTTGACAACCCTGACCGCCCCAAGGACGTCGCCCCTCAGCAGGCAGCCCAGGTTGCT CTTCAAGCCAGCCAGGCGTTGGAGAACGAGACCAAAAACGAGGAGGTCAAGAAAGTGACGGAGACTGCCAAGCAG AACGTCCAGCCCGCTGAGGATATACTAAAAATCGTGAGCGGCATTTTTGCCAACTTTGACTTCGGCTTCGACCAA GGCTCTCCTGCGGGCAGCCCCCCCAGCCGCGCCGGCGCCTCCGCTCCCGGTGTCGGCGGCACCCCGAGCCGCGCC GGCGCCGGCGCCCCTCCCGCCGCCGGCGCCCCTGTTCGCAACTCGTGCTAG |
| Transcript | >Hirsu2|10001 ATGAGATACGCTCTCTTGCTCGCGTCGATCGCGACTATTCAGCCGTTGATCTCGGCCCTGCCTCAGGCACCACCG GCCGAAACCCCAGCCGCGCCTCCTGCGCCCGCTGGCGCTGGCGACGGTGCCGCCACAAGCACTACGACGACCACC ACGGCCGGAGCTCAAGTATCAGAGACCGGGCTCCCACAGCAGGAGAAGAAAGGGCCTGAAGAGCCGAAGGGCCCT GGAGAAGAGCCTGGGGCGCCGCCAAAGGACCCCTCCCAGAACCCCAGCCCCAACGGTGTTGACGGCCAGAATGGA ACGGATGCAGCGGAGCCTCTTGCGATCGCGGACGGCGTGGATGTGAATAAAGCACTGCGGGAGGCGCTGGTAGAA GTACTCGGTGAAGAGGCGGCAAAGGAAGTCGACGAGGAGGCTGATAAAGAACCGCAAGATGAAGGGGGTGATGGT GAGGGCGAGGGTGATGGCCAGGGCGAGGGCGATGGCAAGGGCCAGGGTGAGGGCGCGAAAGGACAAGACGGAGCG GAAACACCAAAGCCGGCGCCAGAGTCGCCAGAGTCGCCGGCGCCGCCAACAGCTGATCCTCCTACGACCGAGCCA GGGAAGGAAGAAGGTCAACCGCAGGGAGACCAGCCCAAGAAACGCGGACTATCGAAGCGGACTTTACAGGCAGGC CGGGCGGGCAAGTCGTTGAACGCATTCGCATCCGCTTCCGGCTCCGCACTCGCGGGCCTGACCGGGTCACAAGCC CGGTTCGTCAACAGATTTACGGCTATATGCATCGTAATCATGCGAAGGAACGGCGGCGGCCAGGCGTCAGGCAAC GGACAGACGCCAGGCCAAGGCCAAACGCAAACGCTACAGACAGGACAGGCGGGCAAAGTGGTACCCCATCTCGAG AGCTTCGGCCTGGCTGCCGGCTCAAAAGTGTTCCGCTCCATGAATGCGGCAGTCCTGATGCTGGTCAACGTCGGG GTTGCAGCCTCTTTGTCTAAAGCGCCACAAGCCAAGGTCAGGGGATGCATGGGAAACACTATGACGGGTGTCCGA GGTGTGGCGCAGTCCGGGGCCAATCTCAAACCCCAGGACTTGTTTGCCAACACGACTTTCGTCGACAACATCGTC AAGGACTGCAACGAGTGTCGACAAATGATTCAGCCCAAACTGCAATTGAACGAGGTGTACGCCCCAAAAGCCGCC CTCATGGCCTTCGTCGTTTATGTCGATTTGGACGCGAGCGCTGGAGGCCAGCAGGCAGGAAACGCGCCGCCTTCC ACAGCCCCCGCCACAGCCCCCGCCACAGCCCCCGCCACACCCCCCGCCACACCCAACCAAGGCCAGCCGCAGTCG CAGTCGCCGTCGCAGGAAGTCAAGTCTCTGCCCCAACGCTTCATCCGCATATGCATGGATATCTCCAAGAAGCCC GAGCTGGCTCCTACCCGACTTGACAACCCTGACCGCCCCAAGGACGTCGCCCCTCAGCAGGCAGCCCAGGTTGCT CTTCAAGCCAGCCAGGCGTTGGAGAACGAGACCAAAAACGAGGAGGTCAAGAAAGTGACGGAGACTGCCAAGCAG AACGTCCAGCCCGCTGAGGATATACTAAAAATCGTGAGCGGCATTTTTGCCAACTTTGACTTCGGCTTCGACCAA GGCTCTCCTGCGGGCAGCCCCCCCAGCCGCGCCGGCGCCTCCGCTCCCGGTGTCGGCGGCACCCCGAGCCGCGCC GGCGCCGGCGCCCCTCCCGCCGCCGGCGCCCCTGTTCGCAACTCGTGCTAG |
| Gene | >Hirsu2|10001 ATGAGATACGCTCTCTTGCTCGCGTCGATCGCGACTATTCAGCCGTTGATCTCGGCCCTGCCTCAGGCACCACCG GCCGAAACCCCAGCCGCGCCTCCTGCGCCCGCTGGCGCTGGCGACGGTGCCGCCACAAGCACTACGACGACCACC ACGGCCGGAGCTCAAGTATCAGAGACCGGGCTCCCACAGCAGGAGAAGAAAGGGCCTGAAGAGCCGAAGGGCCCT GGAGAAGAGCCTGGGGCGCCGCCAAAGGACCCCTCCCAGAACCCCAGCCCCAACGGTGTTGACGGCCAGAATGGA ACGGATGCAGCGGAGCCTCTTGCGATCGCGGACGGCGTGGATGTGAATAAAGCACTGCGGGAGGCGCTGGTAGAA GTACTCGGTGAAGAGGCGGCAAAGGAAGTCGACGAGGAGGCTGATAAAGAACCGCAAGATGAAGGGGGTGATGGT GAGGGCGAGGGTGATGGCCAGGGCGAGGGCGATGGCAAGGGCCAGGGTGAGGGCGCGAAAGGACAAGACGGAGCG GAAACACCAAAGCCGGCGCCAGAGTCGCCAGAGTCGCCGGCGCCGCCAACAGCTGATCCTCCTACGACCGAGCCA GGGAAGGAAGAAGGTCAACCGCAGGGAGACCAGCCCAAGAAACGCGGACTATCGAAGCGGACTTTACAGGCAGGC CGGGCGGGCAAGTCGTTGAACGCATTCGCATCCGCTTCCGGCTCCGCACTCGCGGGCCTGACCGGGTCACAAGCC CGGTTCGTCAACAGATTTACGGCTATATGCATCGTAATCATGCGAAGGAACGGCGGCGGCCAGGCGTCAGGCAAC GGACAGACGCCAGGCCAAGGCCAAACGCAAACGCTACAGACAGGACAGGCGGGCAAAGTGGTACCCCATCTCGAG AGCTTCGGCCTGGCTGCCGGCTCAAAAGTGTTCCGCTCCATGAATGCGGCAGTCCTGATGCTGGTCAACGTCGGG GTTGCAGCCTCTTTGTCTAAAGCGCCACAAGCCAAGGTCAGGGGATGCATGGGAAACACTATGACGGGTGTCCGA GGTGTGGCGCAGTCCGGGGCCAATCTCAAACCCCAGGACTTGTTTGCCAACACGACTTTCGTCGACAACATCGTC AAGGACTGCAACGAGTGTCGACAAATGATTCAGCCCAAACTGCAATTGAACGAGGTGTACGCCCCAAAAGCCGCC CTCATGGCCTTCGTCGTTTATGTCGATTTGGACGCGAGCGCTGGAGGCCAGCAGGCAGGAAACGCGCCGCCTTCC ACAGCCCCCGCCACAGCCCCCGCCACAGCCCCCGCCACACCCCCCGCCACACCCAACCAAGGCCAGCCGCAGTCG CAGTCGCCGTCGCAGGAAGTCAAGTCTCTGCCCCAACGCTTCATCCGCATATGCATGGATATCTCCAAGAAGCCC GAGCTGGCTCCTACCCGACTTGACAACCCTGACCGCCCCAAGGACGTCGCCCCTCAGCAGGCAGCCCAGGTTGCT CTTCAAGCCAGCCAGGCGTTGGAGAACGAGACCAAAAACGAGGAGGTCAAGAAAGTGACGGAGACTGCCAAGCAG AACGTCCAGCCCGCTGAGGATATACTAAAAATCGTGAGCGGCATTTTTGCCAACTTTGACTTCGGCTTCGACCAA GGCTCTCCTGCGGGCAGCCCCCCCAGCCGCGCCGGCGCCTCCGCTCCCGGTGTCGGCGGCACCCCGAGCCGCGCC GGCGCCGGCGCCCCTCCCGCCGCCGGCGCCCCTGTTCGCAACTCGTGCTAG |