Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|10000
Gene name
LocationContig_771:3233..3620
Strand+
Gene length (bp)387
Transcript length (bp)387
Coding sequence length (bp)387
Protein length (aa) 129

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular 0.0856 0.0451 0.6172 0.4989 0.0968 0.0044 0.2471 0.1956 0.199 0.0044

SignalP

SignalP signal predicted Location Score
Yes 1 - 21 0.999723

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup147
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|7960
Ophiocordyceps australis map64 (Brazil) OphauB2|840
Ophiocordyceps camponoti-floridani Ophcf2|02656
Ophiocordyceps camponoti-floridani Ophcf2|06464
Ophiocordyceps camponoti-rufipedis Ophun1|4164
Ophiocordyceps camponoti-rufipedis Ophun1|6322
Ophiocordyceps kimflemingae Ophio5|1791
Ophiocordyceps kimflemingae Ophio5|2231
Ophiocordyceps kimflemingae Ophio5|447
Ophiocordyceps subramaniannii Hirsu2|10000 (this protein)
Ophiocordyceps subramaniannii Hirsu2|2074
Ophiocordyceps subramaniannii Hirsu2|389

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|10000
MKYPHAATALLSFALAVPAIAAGETADACGKQCYDAYTKCLSATEGQSHRNTRASCNSDYFGCLKIEDPNYFVKK
NISMVSIAVSCNTTTSTKPGTDATKPQISTSGGDSIKPALALLSLGAMGSLFF*
Coding >Hirsu2|10000
ATGAAGTACCCACACGCTGCCACCGCGTTGCTGAGCTTCGCTCTTGCTGTACCTGCTATCGCCGCTGGTGAAACC
GCGGATGCATGCGGCAAGCAATGCTACGACGCATACACCAAATGCCTGTCTGCTACGGAAGGCCAGAGCCATCGT
AATACCCGGGCGTCTTGCAACTCGGATTACTTCGGATGCTTAAAGATTGAGGACCCTAATTACTTCGTCAAGAAG
AACATCTCAATGGTTTCAATTGCGGTGTCTTGCAACACCACCACCAGCACCAAGCCTGGCACTGACGCTACCAAG
CCCCAAATCTCCACCAGCGGCGGCGACAGCATCAAGCCCGCCCTGGCTCTCCTGTCCTTGGGAGCTATGGGCTCA
CTTTTCTTCTAA
Transcript >Hirsu2|10000
ATGAAGTACCCACACGCTGCCACCGCGTTGCTGAGCTTCGCTCTTGCTGTACCTGCTATCGCCGCTGGTGAAACC
GCGGATGCATGCGGCAAGCAATGCTACGACGCATACACCAAATGCCTGTCTGCTACGGAAGGCCAGAGCCATCGT
AATACCCGGGCGTCTTGCAACTCGGATTACTTCGGATGCTTAAAGATTGAGGACCCTAATTACTTCGTCAAGAAG
AACATCTCAATGGTTTCAATTGCGGTGTCTTGCAACACCACCACCAGCACCAAGCCTGGCACTGACGCTACCAAG
CCCCAAATCTCCACCAGCGGCGGCGACAGCATCAAGCCCGCCCTGGCTCTCCTGTCCTTGGGAGCTATGGGCTCA
CTTTTCTTCTAA
Gene >Hirsu2|10000
ATGAAGTACCCACACGCTGCCACCGCGTTGCTGAGCTTCGCTCTTGCTGTACCTGCTATCGCCGCTGGTGAAACC
GCGGATGCATGCGGCAAGCAATGCTACGACGCATACACCAAATGCCTGTCTGCTACGGAAGGCCAGAGCCATCGT
AATACCCGGGCGTCTTGCAACTCGGATTACTTCGGATGCTTAAAGATTGAGGACCCTAATTACTTCGTCAAGAAG
AACATCTCAATGGTTTCAATTGCGGTGTCTTGCAACACCACCACCAGCACCAAGCCTGGCACTGACGCTACCAAG
CCCCAAATCTCCACCAGCGGCGGCGACAGCATCAAGCCCGCCCTGGCTCTCCTGTCCTTGGGAGCTATGGGCTCA
CTTTTCTTCTAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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