Protein ID | Hirsu2|10000 |
Gene name | |
Location | Contig_771:3233..3620 |
Strand | + |
Gene length (bp) | 387 |
Transcript length (bp) | 387 |
Coding sequence length (bp) | 387 |
Protein length (aa) | 129 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | 0.0856 | 0.0451 | 0.6172 | 0.4989 | 0.0968 | 0.0044 | 0.2471 | 0.1956 | 0.199 | 0.0044 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 21 | 0.999723 |
Orthofinder run ID | 4 |
Orthogroup | 147 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|10000 MKYPHAATALLSFALAVPAIAAGETADACGKQCYDAYTKCLSATEGQSHRNTRASCNSDYFGCLKIEDPNYFVKK NISMVSIAVSCNTTTSTKPGTDATKPQISTSGGDSIKPALALLSLGAMGSLFF* |
Coding | >Hirsu2|10000 ATGAAGTACCCACACGCTGCCACCGCGTTGCTGAGCTTCGCTCTTGCTGTACCTGCTATCGCCGCTGGTGAAACC GCGGATGCATGCGGCAAGCAATGCTACGACGCATACACCAAATGCCTGTCTGCTACGGAAGGCCAGAGCCATCGT AATACCCGGGCGTCTTGCAACTCGGATTACTTCGGATGCTTAAAGATTGAGGACCCTAATTACTTCGTCAAGAAG AACATCTCAATGGTTTCAATTGCGGTGTCTTGCAACACCACCACCAGCACCAAGCCTGGCACTGACGCTACCAAG CCCCAAATCTCCACCAGCGGCGGCGACAGCATCAAGCCCGCCCTGGCTCTCCTGTCCTTGGGAGCTATGGGCTCA CTTTTCTTCTAA |
Transcript | >Hirsu2|10000 ATGAAGTACCCACACGCTGCCACCGCGTTGCTGAGCTTCGCTCTTGCTGTACCTGCTATCGCCGCTGGTGAAACC GCGGATGCATGCGGCAAGCAATGCTACGACGCATACACCAAATGCCTGTCTGCTACGGAAGGCCAGAGCCATCGT AATACCCGGGCGTCTTGCAACTCGGATTACTTCGGATGCTTAAAGATTGAGGACCCTAATTACTTCGTCAAGAAG AACATCTCAATGGTTTCAATTGCGGTGTCTTGCAACACCACCACCAGCACCAAGCCTGGCACTGACGCTACCAAG CCCCAAATCTCCACCAGCGGCGGCGACAGCATCAAGCCCGCCCTGGCTCTCCTGTCCTTGGGAGCTATGGGCTCA CTTTTCTTCTAA |
Gene | >Hirsu2|10000 ATGAAGTACCCACACGCTGCCACCGCGTTGCTGAGCTTCGCTCTTGCTGTACCTGCTATCGCCGCTGGTGAAACC GCGGATGCATGCGGCAAGCAATGCTACGACGCATACACCAAATGCCTGTCTGCTACGGAAGGCCAGAGCCATCGT AATACCCGGGCGTCTTGCAACTCGGATTACTTCGGATGCTTAAAGATTGAGGACCCTAATTACTTCGTCAAGAAG AACATCTCAATGGTTTCAATTGCGGTGTCTTGCAACACCACCACCAGCACCAAGCCTGGCACTGACGCTACCAAG CCCCAAATCTCCACCAGCGGCGGCGACAGCATCAAGCCCGCCCTGGCTCTCCTGTCCTTGGGAGCTATGGGCTCA CTTTTCTTCTAA |