Fungal Genomics

at Utrecht University

PFAM Domain


General information

PFAM domainPF17862
Short nameAAA_lid_3
Long nameAAA+ lid domain
Proteins with at least one of this domain16
Total domain count17
More informationPFAM website

Proteins with this PFAM domain

Note: all PFAM domains are shown for these proteins
Short name Long name E-value Start End Name
protein ID PFAM
Hirsu2|10100 PF02359 CDC48_N Cell division protein 48 (CDC48), N-terminal domain 1.2E-17 41 122
PF02933 CDC48_2 Cell division protein 48 (CDC48), domain 2 2.0E-06 143 206
PF07728 AAA_5 AAA domain (dynein-related subfamily) 3.4E-06 256 375
PF00004 AAA ATPase family associated with various cellular activities (AAA) 1.1E-47 257 386
PF05496 RuvB_N Holliday junction DNA helicase RuvB P-loop domain 3.2E-06 257 331
PF07724 AAA_2 AAA domain (Cdc48 subfamily) 2.1E-07 257 354
PF17862 AAA_lid_3 AAA+ lid domain 9.4E-12 409 448
PF00004 AAA ATPase family associated with various cellular activities (AAA) 1.6E-47 531 664
PF05496 RuvB_N Holliday junction DNA helicase RuvB P-loop domain 5.5E-05 531 564
PF17862 AAA_lid_3 AAA+ lid domain 6.4E-07 686 725
PF09336 Vps4_C Vps4 C terminal oligomerisation domain 1.5E-04 746 779
Hirsu2|10191 PF06480 FtsH_ext FtsH Extracellular 1.2E-10 238 342
PF00004 AAA ATPase family associated with various cellular activities (AAA) 7.9E-41 445 578
PF17862 AAA_lid_3 AAA+ lid domain 4.1E-13 607 646
PF01434 Peptidase_M41 Peptidase family M41 5.6E-68 662 841
Hirsu2|10500 PF17862 AAA_lid_3 AAA+ lid domain 1.8E-07 29 77
Hirsu2|1152 PF00004 AAA ATPase family associated with various cellular activities (AAA) 5.4E-40 220 351
PF17862 AAA_lid_3 AAA+ lid domain 1.7E-06 377 416
Hirsu2|1160 PF16450 Prot_ATP_ID_OB Proteasomal ATPase OB C-terminal domain 6.4E-07 56 104
PF07728 AAA_5 AAA domain (dynein-related subfamily) 9.8E-07 168 289
PF00004 AAA ATPase family associated with various cellular activities (AAA) 2.4E-43 169 301
PF07724 AAA_2 AAA domain (Cdc48 subfamily) 1.1E-06 169 262
PF17862 AAA_lid_3 AAA+ lid domain 4.4E-14 325 367
Hirsu2|1548 PF02933 CDC48_2 Cell division protein 48 (CDC48), domain 2 5.2E-06 178 219
PF00004 AAA ATPase family associated with various cellular activities (AAA) 1.8E-36 323 464
PF17862 AAA_lid_3 AAA+ lid domain 1.1E-08 491 526
PF00004 AAA ATPase family associated with various cellular activities (AAA) 6.4E-10 605 735
Hirsu2|1691 PF16450 Prot_ATP_ID_OB Proteasomal ATPase OB C-terminal domain 2.2E-11 126 180
PF05673 DUF815 Protein of unknown function (DUF815) 2.1E-05 234 304
PF00004 AAA ATPase family associated with various cellular activities (AAA) 7.9E-41 239 371
PF07724 AAA_2 AAA domain (Cdc48 subfamily) 8.7E-06 240 332
PF17862 AAA_lid_3 AAA+ lid domain 5.7E-11 394 437
Hirsu2|2287 PF05496 RuvB_N Holliday junction DNA helicase RuvB P-loop domain 7.0E-06 105 171
PF00004 AAA ATPase family associated with various cellular activities (AAA) 2.9E-38 107 233
PF17862 AAA_lid_3 AAA+ lid domain 9.6E-08 258 290
Hirsu2|4221 PF05496 RuvB_N Holliday junction DNA helicase RuvB P-loop domain 5.9E-05 541 611
PF00004 AAA ATPase family associated with various cellular activities (AAA) 9.4E-37 543 688
PF17862 AAA_lid_3 AAA+ lid domain 1.6E-08 711 746
PF09336 Vps4_C Vps4 C terminal oligomerisation domain 8.0E-06 758 791
Hirsu2|4469 PF16450 Prot_ATP_ID_OB Proteasomal ATPase OB C-terminal domain 5.9E-18 71 147
PF00004 AAA ATPase family associated with various cellular activities (AAA) 1.6E-39 206 338
PF17862 AAA_lid_3 AAA+ lid domain 8.8E-08 361 401
Hirsu2|5232 PF16450 Prot_ATP_ID_OB Proteasomal ATPase OB C-terminal domain 9.3E-11 59 114
PF05496 RuvB_N Holliday junction DNA helicase RuvB P-loop domain 1.5E-05 171 238
PF07728 AAA_5 AAA domain (dynein-related subfamily) 3.8E-05 171 292
PF00004 AAA ATPase family associated with various cellular activities (AAA) 1.2E-42 172 305
PF07724 AAA_2 AAA domain (Cdc48 subfamily) 9.3E-06 172 264
PF17862 AAA_lid_3 AAA+ lid domain 4.8E-10 327 371
Hirsu2|5908 PF05496 RuvB_N Holliday junction DNA helicase RuvB P-loop domain 1.2E-05 147 266
PF07728 AAA_5 AAA domain (dynein-related subfamily) 3.5E-05 147 217
PF00004 AAA ATPase family associated with various cellular activities (AAA) 2.7E-38 148 281
PF07724 AAA_2 AAA domain (Cdc48 subfamily) 3.7E-05 148 229
PF17862 AAA_lid_3 AAA+ lid domain 1.9E-09 305 342
Hirsu2|7355 PF07728 AAA_5 AAA domain (dynein-related subfamily) 7.0E-06 181 250
PF00004 AAA ATPase family associated with various cellular activities (AAA) 7.5E-43 182 311
PF17862 AAA_lid_3 AAA+ lid domain 2.4E-10 334 377
PF01434 Peptidase_M41 Peptidase family M41 1.0E-53 392 571
Hirsu2|8595 PF04212 MIT MIT (microtubule interacting and transport) domain 1.8E-16 7 71
PF05496 RuvB_N Holliday junction DNA helicase RuvB P-loop domain 8.2E-07 157 253
PF00004 AAA ATPase family associated with various cellular activities (AAA) 4.2E-41 164 292
PF17862 AAA_lid_3 AAA+ lid domain 2.7E-06 318 347
PF09336 Vps4_C Vps4 C terminal oligomerisation domain 1.8E-26 366 426
Hirsu2|8791 PF01695 IstB_IS21 IstB-like ATP binding protein 1.5E-05 609 705
PF00004 AAA ATPase family associated with various cellular activities (AAA) 2.4E-42 621 756
PF07724 AAA_2 AAA domain (Cdc48 subfamily) 4.9E-05 621 719
PF17862 AAA_lid_3 AAA+ lid domain 2.6E-08 781 815
PF00004 AAA ATPase family associated with various cellular activities (AAA) 7.9E-05 924 1024
Hirsu2|9658 PF09262 PEX-1N Peroxisome biogenesis factor 1, N-terminal 8.0E-28 135 226
PF12775 AAA_7 P-loop containing dynein motor region 5.2E-06 537 623
PF00004 AAA ATPase family associated with various cellular activities (AAA) 2.2E-10 547 681
PF00004 AAA ATPase family associated with various cellular activities (AAA) 3.3E-43 880 1006
PF17862 AAA_lid_3 AAA+ lid domain 7.6E-09 1040 1072

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