Fungal Genomics

at Utrecht University

PFAM Domain


General information

PFAM domainPF04851
Short nameResIII
Long nameType III restriction enzyme, res subunit
Proteins with at least one of this domain35
Total domain count37
More informationPFAM website

Proteins with this PFAM domain

Note: all PFAM domains are shown for these proteins
Short name Long name E-value Start End Name
protein ID PFAM
Hirsu2|10420 PF04851 ResIII Type III restriction enzyme, res subunit 7.5E-07 190 402
PF00176 SNF2_N SNF2 family N-terminal domain 3.6E-69 191 523
PF00270 DEAD DEAD/DEAH box helicase 3.8E-09 245 377
PF00271 Helicase_C Helicase conserved C-terminal domain 1.7E-11 671 769
Hirsu2|10648 PF04851 ResIII Type III restriction enzyme, res subunit 1.1E-07 217 408
PF00176 SNF2_N SNF2 family N-terminal domain 2.0E-58 218 556
Hirsu2|10841 PF04851 ResIII Type III restriction enzyme, res subunit 5.3E-06 173 345
PF00176 SNF2_N SNF2 family N-terminal domain 1.1E-48 191 451
PF16203 ERCC3_RAD25_C ERCC3/RAD25/XPB C-terminal helicase 1.2E-06 537 647
PF00271 Helicase_C Helicase conserved C-terminal domain 3.5E-18 550 662
PF14773 VIGSSK Helicase-associated putative binding domain, C-terminal 4.0E-25 798 862
Hirsu2|10865 PF00270 DEAD DEAD/DEAH box helicase 3.4E-39 55 227
PF04851 ResIII Type III restriction enzyme, res subunit 2.3E-06 68 190
PF00271 Helicase_C Helicase conserved C-terminal domain 3.5E-28 268 425
Hirsu2|10869 PF00270 DEAD DEAD/DEAH box helicase 2.1E-38 80 248
PF04851 ResIII Type III restriction enzyme, res subunit 8.7E-08 96 244
PF00271 Helicase_C Helicase conserved C-terminal domain 5.0E-24 286 394
Hirsu2|11002 PF04851 ResIII Type III restriction enzyme, res subunit 4.7E-09 167 360
PF00176 SNF2_N SNF2 family N-terminal domain 6.5E-45 190 451
PF00271 Helicase_C Helicase conserved C-terminal domain 3.2E-15 731 828
Hirsu2|1114 PF04851 ResIII Type III restriction enzyme, res subunit 1.2E-09 182 341
PF00176 SNF2_N SNF2 family N-terminal domain 1.5E-75 194 465
PF00271 Helicase_C Helicase conserved C-terminal domain 8.6E-18 487 600
PF09110 HAND HAND 1.9E-35 753 857
PF09111 SLIDE SLIDE 1.2E-42 914 1030
Hirsu2|1357 PF04851 ResIII Type III restriction enzyme, res subunit 2.0E-08 867 1027
PF00176 SNF2_N SNF2 family N-terminal domain 1.5E-65 883 1165
PF00271 Helicase_C Helicase conserved C-terminal domain 3.2E-18 1429 1541
Hirsu2|1725 PF00270 DEAD DEAD/DEAH box helicase 3.1E-39 127 301
PF04851 ResIII Type III restriction enzyme, res subunit 4.4E-05 148 296
PF00271 Helicase_C Helicase conserved C-terminal domain 2.8E-30 350 453
Hirsu2|2108 PF00270 DEAD DEAD/DEAH box helicase 2.4E-15 362 460
PF04851 ResIII Type III restriction enzyme, res subunit 1.1E-06 367 446
PF00270 DEAD DEAD/DEAH box helicase 2.3E-12 528 614
PF00271 Helicase_C Helicase conserved C-terminal domain 1.8E-18 751 850
Hirsu2|2390 PF04851 ResIII Type III restriction enzyme, res subunit 1.1E-06 127 311
PF00270 DEAD DEAD/DEAH box helicase 4.0E-28 129 340
PF00271 Helicase_C Helicase conserved C-terminal domain 3.3E-18 408 528
Hirsu2|2888 PF00270 DEAD DEAD/DEAH box helicase 2.3E-48 152 322
PF04851 ResIII Type III restriction enzyme, res subunit 2.9E-05 172 315
PF00271 Helicase_C Helicase conserved C-terminal domain 5.7E-31 365 470
Hirsu2|2898 PF15446 zf-PHD-like PHD/FYVE-zinc-finger like domain 3.4E-66 400 568
PF04851 ResIII Type III restriction enzyme, res subunit 4.3E-06 772 938
PF00176 SNF2_N SNF2 family N-terminal domain 3.9E-49 784 1061
PF11496 HDA2-3 Class II histone deacetylase complex subunits 2 and 3 1.6E-06 1004 1223
PF00271 Helicase_C Helicase conserved C-terminal domain 1.0E-17 1089 1199
Hirsu2|3685 PF04851 ResIII Type III restriction enzyme, res subunit 1.6E-25 46 208
PF00270 DEAD DEAD/DEAH box helicase 1.0E-11 51 211
Hirsu2|3832 PF04851 ResIII Type III restriction enzyme, res subunit 6.3E-08 264 413
PF00270 DEAD DEAD/DEAH box helicase 1.3E-27 267 440
PF00271 Helicase_C Helicase conserved C-terminal domain 2.0E-09 498 607
PF09369 DUF1998 Domain of unknown function (DUF1998) 1.8E-20 871 959
Hirsu2|4152 PF13625 Helicase_C_3 Helicase conserved C-terminal domain 3.5E-33 103 227
PF04851 ResIII Type III restriction enzyme, res subunit 1.1E-14 342 499
PF00176 SNF2_N SNF2 family N-terminal domain 4.1E-07 368 502
PF16203 ERCC3_RAD25_C ERCC3/RAD25/XPB C-terminal helicase 2.0E-122 525 760
PF00271 Helicase_C Helicase conserved C-terminal domain 1.1E-11 569 675
Hirsu2|4259 PF09416 UPF1_Zn_bind RNA helicase (UPF2 interacting domain) 2.4E-68 125 275
PF18141 DUF5599 Domain of unknown function (DUF5599) 4.8E-32 329 423
PF04851 ResIII Type III restriction enzyme, res subunit 4.9E-06 480 556
PF13086 AAA_11 AAA domain 3.1E-23 480 588
PF13604 AAA_30 AAA domain 1.6E-12 480 678
PF13245 AAA_19 AAA domain 3.9E-10 484 677
PF13086 AAA_11 AAA domain 3.2E-31 577 682
PF13087 AAA_12 AAA domain 2.1E-60 689 885
Hirsu2|4710 PF08658 Rad54_N Rad54 N terminal 1.7E-48 61 229
PF04851 ResIII Type III restriction enzyme, res subunit 9.0E-10 250 429
PF00176 SNF2_N SNF2 family N-terminal domain 2.5E-57 271 561
PF00271 Helicase_C Helicase conserved C-terminal domain 3.1E-15 601 711
Hirsu2|4805 PF00270 DEAD DEAD/DEAH box helicase 1.8E-09 251 318
PF04851 ResIII Type III restriction enzyme, res subunit 3.7E-07 254 321
Hirsu2|4946 PF00270 DEAD DEAD/DEAH box helicase 1.8E-46 71 237
PF04851 ResIII Type III restriction enzyme, res subunit 6.8E-05 91 231
PF00271 Helicase_C Helicase conserved C-terminal domain 6.2E-30 274 382
Hirsu2|505 PF13892 DBINO DNA-binding domain 7.6E-48 741 872
PF04851 ResIII Type III restriction enzyme, res subunit 7.4E-07 982 1150
PF00176 SNF2_N SNF2 family N-terminal domain 3.8E-64 996 1284
PF00271 Helicase_C Helicase conserved C-terminal domain 3.5E-20 1565 1677
Hirsu2|52 PF00270 DEAD DEAD/DEAH box helicase 1.1E-45 49 213
PF04851 ResIII Type III restriction enzyme, res subunit 4.3E-05 62 208
PF00271 Helicase_C Helicase conserved C-terminal domain 8.8E-31 250 358
Hirsu2|5560 PF00176 SNF2_N SNF2 family N-terminal domain 3.1E-60 151 497
PF04851 ResIII Type III restriction enzyme, res subunit 3.9E-05 151 370
PF00271 Helicase_C Helicase conserved C-terminal domain 3.2E-07 609 722
Hirsu2|574 PF00176 SNF2_N SNF2 family N-terminal domain 1.2E-43 112 291
PF04851 ResIII Type III restriction enzyme, res subunit 9.9E-07 114 268
PF00097 zf-C3HC4 Zinc finger, C3HC4 type (RING finger) 9.6E-06 449 488
PF00271 Helicase_C Helicase conserved C-terminal domain 6.3E-16 527 641
Hirsu2|6011 PF00270 DEAD DEAD/DEAH box helicase 3.8E-48 75 244
PF04851 ResIII Type III restriction enzyme, res subunit 5.0E-06 92 237
PF00271 Helicase_C Helicase conserved C-terminal domain 9.0E-25 281 391
PF13959 DUF4217 Domain of unknown function (DUF4217) 1.3E-20 433 493
Hirsu2|629 PF04851 ResIII Type III restriction enzyme, res subunit 8.8E-05 867 1053
PF00176 SNF2_N SNF2 family N-terminal domain 3.8E-42 885 1152
Hirsu2|6747 PF18149 Helicase_PWI N-terminal helicase PWI domain 5.1E-33 289 404
PF00270 DEAD DEAD/DEAH box helicase 7.2E-29 527 702
PF04851 ResIII Type III restriction enzyme, res subunit 4.5E-14 528 701
PF00271 Helicase_C Helicase conserved C-terminal domain 2.3E-07 764 905
PF02889 Sec63 Sec63 Brl domain 3.5E-91 1027 1332
PF00270 DEAD DEAD/DEAH box helicase 3.4E-18 1378 1543
PF04851 ResIII Type III restriction enzyme, res subunit 9.6E-06 1382 1511
PF02889 Sec63 Sec63 Brl domain 8.9E-67 1862 2185
Hirsu2|7043 PF00270 DEAD DEAD/DEAH box helicase 8.1E-27 276 462
PF04851 ResIII Type III restriction enzyme, res subunit 4.1E-08 279 459
PF02889 Sec63 Sec63 Brl domain 5.8E-81 787 1090
PF00270 DEAD DEAD/DEAH box helicase 3.2E-21 1136 1298
PF04851 ResIII Type III restriction enzyme, res subunit 6.0E-11 1141 1297
PF00271 Helicase_C Helicase conserved C-terminal domain 1.5E-06 1412 1499
PF02889 Sec63 Sec63 Brl domain 1.0E-21 1626 1715
Hirsu2|83 PF04851 ResIII Type III restriction enzyme, res subunit 5.3E-05 94 150
PF05970 PIF1 PIF1-like helicase 6.6E-70 94 296
PF13604 AAA_30 AAA domain 8.6E-10 94 300
Hirsu2|8381 PF04851 ResIII Type III restriction enzyme, res subunit 1.5E-07 915 1087
PF00270 DEAD DEAD/DEAH box helicase 7.9E-21 919 1091
PF00271 Helicase_C Helicase conserved C-terminal domain 3.8E-13 1132 1237
PF16124 RecQ_Zn_bind RecQ zinc-binding 4.7E-15 1250 1315
PF09382 RQC RQC domain 1.4E-13 1321 1432
Hirsu2|8384 PF00270 DEAD DEAD/DEAH box helicase 3.9E-17 163 321
PF04851 ResIII Type III restriction enzyme, res subunit 1.3E-21 164 316
PF00271 Helicase_C Helicase conserved C-terminal domain 1.4E-21 519 626
Hirsu2|9387 PF04851 ResIII Type III restriction enzyme, res subunit 4.3E-07 148 410
PF00176 SNF2_N SNF2 family N-terminal domain 3.1E-72 153 546
PF00271 Helicase_C Helicase conserved C-terminal domain 2.8E-14 705 811
Hirsu2|967 PF04851 ResIII Type III restriction enzyme, res subunit 2.5E-13 138 306
PF00270 DEAD DEAD/DEAH box helicase 1.2E-11 140 306
PF00271 Helicase_C Helicase conserved C-terminal domain 2.3E-15 476 591
PF03368 Dicer_dimer Dicer dimerisation domain 7.6E-17 669 755
PF14622 Ribonucleas_3_3 Ribonuclease-III-like 7.5E-09 1098 1213
PF00636 Ribonuclease_3 Ribonuclease III domain 1.9E-19 1107 1213
PF14622 Ribonucleas_3_3 Ribonuclease-III-like 7.1E-11 1290 1369
PF00636 Ribonuclease_3 Ribonuclease III domain 5.3E-19 1310 1457
Hirsu2|9829 PF04851 ResIII Type III restriction enzyme, res subunit 1.1E-09 145 312
PF00176 SNF2_N SNF2 family N-terminal domain 3.2E-68 158 436
Hirsu2|9843 PF04851 ResIII Type III restriction enzyme, res subunit 1.4E-07 402 583
PF00176 SNF2_N SNF2 family N-terminal domain 3.5E-65 416 715
PF00271 Helicase_C Helicase conserved C-terminal domain 4.4E-16 748 849

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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