Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS8_1|g2824.t1
Gene name
Locationscaffold_009:266619..267730
Strand+
Gene length (bp)1111
Transcript length (bp)1011
Coding sequence length (bp)1011
Protein length (aa) 337

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04479 RTA1 RTA1 like protein 4.5E-62 70 300

GO

GO Term Description Terminal node
GO:0016021 integral component of membrane Yes
GO:0005575 cellular_component No
GO:0110165 cellular anatomical entity No
GO:0031224 intrinsic component of membrane No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

Domain # Start End Length
1 30 52 22
2 59 81 22
3 96 118 22
4 135 157 22
5 189 211 22
6 232 254 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID3
Orthogroup8019
Change Orthofinder run
Species Protein ID
Aspergillus niger CBS 112.32 Ani_SJS6_1|g6476.t1
Aspergillus niger CBS 113.50 Ani_SJS3_1|g7683.t1
Aspergillus niger CBS 115988 Ani_SJS16_1|g7168.t1
Aspergillus niger CBS 115989 Ani_SJS83_1|g6932.t1
Aspergillus niger CBS 118.52 Ani_SJS14_1|g4915.t1
Aspergillus niger CBS 124.48 Ani_SJS7_1|g4372.t1
Aspergillus niger CBS 131.52 Ani_SJS8_1|g2824.t1 (this protein)
Aspergillus niger CBS 133816 Ani_SJS71_1|g5045.t1
Aspergillus niger CBS 147320 Ani_SJS28_1|g5558.t1
Aspergillus niger CBS 147321 Ani_SJS30_1|g2298.t1
Aspergillus niger CBS 147322 Ani_SJS35_1|g3257.t1
Aspergillus niger CBS 147323 Ani_SJS38_1|g9051.t1
Aspergillus niger CBS 147324 Ani_SJS39_1|g2896.t1
Aspergillus niger CBS 147343 Ani_SJS115_1|g6490.t1
Aspergillus niger CBS 147344 Ani_SJS70_1|g3476.t1
Aspergillus niger CBS 147345 Ani_SJS72_1|g3075.t1
Aspergillus niger CBS 147346 Ani_SJS75_1|g10278.t1
Aspergillus niger CBS 147347 Ani_SJS76_1|g5802.t1
Aspergillus niger CBS 147352 Ani_SJS95_1|g6318.t1
Aspergillus niger CBS 147353 Ani_SJS100_1|g7789.t1
Aspergillus niger CBS 147371 Ani_SJS27_1|g4217.t1
Aspergillus niger CBS 147482 Ani_SJS55_1|g4316.t1
Aspergillus niger CBS 630.78 Ani_SJS18_1|g5844.t1
Aspergillus niger CBS 769.97 Ani_SJS82_1|g1544.t1

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS8_1|g2824.t1
MSASGHGSSETQAYGSDTCHAYVDGVSTSYGYVPSLAAASTFVALFGASMLGHTVQMVWFRTWWGSVFPLGCLVE
TLGWAARIWSAKCPYAQTPYLMQLTTLIIAPTFFTAGIYVLLARFIRIFGPQSSVLSPKLYLWIFCTCDIISLVV
QAAGGGMASSGGGGGDSSSSSSSLDTRETSSSNSQSTGTHIMVGGIIFQLVAITVFVALGADFAWRVFCREVPSR
RGNAHMPIVIGLFSAMVFSVLLIYIRSVYRTIELLHGWTSSTMRNEKLLIGLDRAMMVPAVIVFNIFHPGQLLRK
IELRANSVPMMSEQTLVLEDLEEESQGDKLMLLERG*
Coding >Ani_SJS8_1|g2824.t1
ATGAGTGCTTCAGGCCACGGAAGCTCAGAAACACAGGCATACGGCAGCGATACATGCCATGCCTATGTGGATGGC
GTGTCCACTTCATACGGCTATGTGCCCTCACTCGCAGCAGCCTCTACCTTTGTAGCTCTCTTTGGCGCTTCGATG
CTAGGCCATACTGTCCAAATGGTGTGGTTTCGTACCTGGTGGGGTTCCGTGTTCCCGCTAGGATGCTTGGTCGAA
ACCCTAGGTTGGGCGGCCCGAATATGGTCTGCTAAGTGCCCCTACGCTCAGACACCATATCTCATGCAACTCACT
ACCCTCATCATAGCACCAACGTTCTTCACCGCAGGAATTTACGTCCTGCTAGCCCGTTTCATTCGCATCTTCGGC
CCCCAATCATCTGTCCTTTCTCCTAAGCTCTACCTCTGGATCTTCTGCACCTGCGATATTATCTCTTTGGTTGTC
CAGGCAGCAGGAGGAGGTATGGCTTCATCAGGAGGAGGTGGTGGGGACTCATCCTCCAGCAGCAGCTCGTTGGAC
ACCAGAGAGACCTCTTCCTCCAACTCCCAATCAACCGGAACCCACATCATGGTCGGCGGCATCATCTTCCAGCTC
GTGGCTATAACAGTCTTCGTTGCCCTTGGCGCTGATTTTGCCTGGCGCGTATTCTGCCGCGAAGTACCATCCCGC
CGGGGTAACGCGCACATGCCGATAGTGATCGGTTTATTTTCGGCAATGGTGTTTTCGGTCCTCTTGATCTATATT
CGGAGTGTATATCGGACGATTGAGTTGCTACATGGGTGGACCAGTTCAACAATGCGAAATGAAAAATTGTTAATT
GGGTTGGATAGGGCGATGATGGTGCCGGCTGTTATTGTTTTCAATATTTTTCATCCGGGGCAGTTATTGCGGAAG
ATTGAATTGCGGGCGAATTCGGTGCCTATGATGAGCGAGCAGACTTTGGTCTTGGAGGACCTTGAGGAGGAGAGT
CAGGGGGATAAGTTGATGTTGTTGGAAAGGGGCTAG
Transcript >Ani_SJS8_1|g2824.t1
ATGAGTGCTTCAGGCCACGGAAGCTCAGAAACACAGGCATACGGCAGCGATACATGCCATGCCTATGTGGATGGC
GTGTCCACTTCATACGGCTATGTGCCCTCACTCGCAGCAGCCTCTACCTTTGTAGCTCTCTTTGGCGCTTCGATG
CTAGGCCATACTGTCCAAATGGTGTGGTTTCGTACCTGGTGGGGTTCCGTGTTCCCGCTAGGATGCTTGGTCGAA
ACCCTAGGTTGGGCGGCCCGAATATGGTCTGCTAAGTGCCCCTACGCTCAGACACCATATCTCATGCAACTCACT
ACCCTCATCATAGCACCAACGTTCTTCACCGCAGGAATTTACGTCCTGCTAGCCCGTTTCATTCGCATCTTCGGC
CCCCAATCATCTGTCCTTTCTCCTAAGCTCTACCTCTGGATCTTCTGCACCTGCGATATTATCTCTTTGGTTGTC
CAGGCAGCAGGAGGAGGTATGGCTTCATCAGGAGGAGGTGGTGGGGACTCATCCTCCAGCAGCAGCTCGTTGGAC
ACCAGAGAGACCTCTTCCTCCAACTCCCAATCAACCGGAACCCACATCATGGTCGGCGGCATCATCTTCCAGCTC
GTGGCTATAACAGTCTTCGTTGCCCTTGGCGCTGATTTTGCCTGGCGCGTATTCTGCCGCGAAGTACCATCCCGC
CGGGGTAACGCGCACATGCCGATAGTGATCGGTTTATTTTCGGCAATGGTGTTTTCGGTCCTCTTGATCTATATT
CGGAGTGTATATCGGACGATTGAGTTGCTACATGGGTGGACCAGTTCAACAATGCGAAATGAAAAATTGTTAATT
GGGTTGGATAGGGCGATGATGGTGCCGGCTGTTATTGTTTTCAATATTTTTCATCCGGGGCAGTTATTGCGGAAG
ATTGAATTGCGGGCGAATTCGGTGCCTATGATGAGCGAGCAGACTTTGGTCTTGGAGGACCTTGAGGAGGAGAGT
CAGGGGGATAAGTTGATGTTGTTGGAAAGGGGCTAG
Gene >Ani_SJS8_1|g2824.t1
ATGAGTGCTTCAGGCCACGGAAGCTCAGAAACACAGGCATACGGCAGCGATACATGCCATGCCTATGTGGATGGC
GTGTCCACTTCATACGGCTATGTGCCCTCACTCGCAGCAGCCTCTACCTTTGTAGCTCTCTTTGGCGCTTCGATG
CTAGGCCATACTGTCCAAATGGTGTGGTTTCGTACCTGGTGGGGTTCCGTGTTCCCGCTAGGATGCTTGGGTATC
TTGACCACCCCAGAGCCTAGATCAATTATGCTAACTAGAACACAGTCGAAACCCTAGGTTGGGCGGCCCGAATAT
GGTCTGCTAAGTGCCCCTACGCTCAGACACCATATCTCATGCAACTCACTACCCTCATCATAGGTGAGATATCCC
ATTGCTAGTACTGGGGCACACCTGACATTCATTGATAGCACCAACGTTCTTCACCGCAGGAATTTACGTCCTGCT
AGCCCGTTTCATTCGCATCTTCGGCCCCCAATCATCTGTCCTTTCTCCTAAGCTCTACCTCTGGATCTTCTGCAC
CTGCGATATTATCTCTTTGGTTGTCCAGGCAGCAGGAGGAGGTATGGCTTCATCAGGAGGAGGTGGTGGGGACTC
ATCCTCCAGCAGCAGCTCGTTGGACACCAGAGAGACCTCTTCCTCCAACTCCCAATCAACCGGAACCCACATCAT
GGTCGGCGGCATCATCTTCCAGCTCGTGGCTATAACAGTCTTCGTTGCCCTTGGCGCTGATTTTGCCTGGCGCGT
ATTCTGCCGCGAAGTACCATCCCGCCGGGGTAACGCGCACATGCCGATAGTGATCGGTTTATTTTCGGCAATGGT
GTTTTCGGTCCTCTTGATCTATATTCGGAGTGTATATCGGACGATTGAGTTGCTACATGGGTGGACCAGTTCAAC
AATGCGAAATGAAAAATTGTTAATTGGGTTGGATAGGGCGATGATGGTGCCGGCTGTTATTGTTTTCAATATTTT
TCATCCGGGGCAGTTATTGCGGAAGATTGAATTGCGGGCGAATTCGGTGCCTATGATGAGCGAGCAGACTTTGGT
CTTGGAGGACCTTGAGGAGGAGAGTCAGGGGGATAAGTTGATGTTGTTGGAAAGGGGCTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail