Protein ID | Ani_SJS72_1|g9937.t1 |
Gene name | |
Location | scaffold_119:1264..2723 |
Strand | + |
Gene length (bp) | 1459 |
Transcript length (bp) | 1392 |
Coding sequence length (bp) | 1392 |
Protein length (aa) | 464 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF16010 | CDH-cyt | Cytochrome domain of cellobiose dehydrogenase | 2.3E-23 | 25 | 201 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
Yes | 1 - 17 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 258 | 280 | 22 |
2 | 287 | 309 | 22 |
3 | 319 | 341 | 22 |
4 | 361 | 383 | 22 |
5 | 393 | 415 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS72_1|g9937.t1 MKWLNLLPIALGLANASIISFSPPTNPDIIYSLTIPNTTTLSTPGPIYIQITAPTSIQWVGLGQGAQMTGANMFL LYTSSSTKITLSPRSGLGHFEPQYTSNTQITMLPGTGISTINSTTAALTNSSSSSSDNTRTTMTANFRCDNCLTW QDGTGTMNPKDPNFPFIWAYREGVPINSAAMDADISIHDDMGGIQVDLTRAGMPPQPNTSTTEDDQINPFTNYNP ATDSVPVQAPSTPTSPLPNLTKMTHILITHATLMSLSFVLFYPLAALLMPLPISLPVEKFRLHMPLQIFTMLMTL AGFGCGIYLAYETGQLKTAHPILGIIVVGVLVLFQPAMGWLQHWGFLRTGGRTVWGVCHRWLGRGVIVVGVVNGG IGLHAARGMGMAPLGAVIGYAVVAGVVGVVYVVGVLVGWVVERRRKRVEGERVDGEGVGEVQRGESVEGRDVREN DGEKGGSVEERDG* |
Coding | >Ani_SJS72_1|g9937.t1 ATGAAGTGGCTCAACCTCCTCCCCATAGCCTTAGGGCTAGCCAACGCAAGCATCATCTCCTTCTCCCCCCCAACC AACCCGGACATCATCTACAGCCTCACCATCCCCAACACCACGACTCTCTCCACCCCAGGTCCCATCTACATCCAA ATCACCGCCCCAACCTCCATCCAATGGGTCGGCCTCGGCCAAGGCGCCCAAATGACCGGCGCCAACATGTTCCTC CTGTACACCTCGTCATCCACCAAAATAACCCTCTCCCCGCGCTCCGGCCTCGGCCACTTCGAACCCCAATACACA AGCAACACCCAAATCACCATGCTCCCGGGCACCGGCATCTCCACCATCAACTCCACCACCGCCGCCCTCACCAAC AGCTCATCCTCCTCCTCCGACAACACCAGAACAACCATGACGGCCAACTTCCGCTGCGACAACTGTCTCACCTGG CAAGACGGCACCGGCACGATGAACCCCAAGGACCCGAACTTCCCATTCATCTGGGCCTATCGCGAGGGCGTCCCC ATCAACTCAGCCGCCATGGACGCGGACATCTCAATCCACGACGACATGGGTGGTATCCAAGTCGATCTCACTCGG GCAGGTATGCCCCCGCAACCTAACACCTCCACTACCGAGGACGACCAAATAAACCCCTTCACCAACTATAACCCA GCTACGGACTCCGTCCCCGTACAAGCCCCCAGCACACCTACCTCCCCGCTCCCCAACCTTACTAAAATGACGCAT ATCCTCATCACCCACGCAACGCTGATGTCCCTCTCCTTCGTCCTCTTCTACCCGCTCGCTGCTCTGCTCATGCCA CTTCCTATATCCCTCCCTGTCGAGAAGTTCCGGCTCCACATGCCACTCCAGATCTTCACGATGCTCATGACGCTT GCTGGCTTCGGATGCGGAATTTACCTCGCGTATGAGACGGGGCAGTTGAAGACGGCGCACCCTATCCTGGGGATT ATTGTGGTCGGGGTGTTGGTGCTGTTTCAGCCGGCGATGGGGTGGTTGCAGCATTGGGGGTTCTTGAGGACGGGG GGGAGGACGGTGTGGGGGGTGTGTCATAGGTGGCTTGGGAGGGGGGTTATTGTGGTGGGTGTGGTTAATGGGGGG ATTGGGTTGCATGCTGCTAGGGGGATGGGGATGGCGCCGTTGGGGGCGGTCATTGGGTATGCGGTTGTGGCGGGC GTGGTTGGAGTGGTTTATGTGGTGGGTGTGCTGGTGGGGTGGGTGGTGGAGAGGAGGAGGAAGCGGGTGGAGGGG GAGAGGGTAGATGGGGAGGGAGTTGGGGAGGTGCAGAGGGGGGAAAGTGTGGAGGGGAGGGATGTGCGGGAGAAT GATGGGGAGAAGGGAGGGAGTGTGGAGGAGAGGGATGGTTAG |
Transcript | >Ani_SJS72_1|g9937.t1 ATGAAGTGGCTCAACCTCCTCCCCATAGCCTTAGGGCTAGCCAACGCAAGCATCATCTCCTTCTCCCCCCCAACC AACCCGGACATCATCTACAGCCTCACCATCCCCAACACCACGACTCTCTCCACCCCAGGTCCCATCTACATCCAA ATCACCGCCCCAACCTCCATCCAATGGGTCGGCCTCGGCCAAGGCGCCCAAATGACCGGCGCCAACATGTTCCTC CTGTACACCTCGTCATCCACCAAAATAACCCTCTCCCCGCGCTCCGGCCTCGGCCACTTCGAACCCCAATACACA AGCAACACCCAAATCACCATGCTCCCGGGCACCGGCATCTCCACCATCAACTCCACCACCGCCGCCCTCACCAAC AGCTCATCCTCCTCCTCCGACAACACCAGAACAACCATGACGGCCAACTTCCGCTGCGACAACTGTCTCACCTGG CAAGACGGCACCGGCACGATGAACCCCAAGGACCCGAACTTCCCATTCATCTGGGCCTATCGCGAGGGCGTCCCC ATCAACTCAGCCGCCATGGACGCGGACATCTCAATCCACGACGACATGGGTGGTATCCAAGTCGATCTCACTCGG GCAGGTATGCCCCCGCAACCTAACACCTCCACTACCGAGGACGACCAAATAAACCCCTTCACCAACTATAACCCA GCTACGGACTCCGTCCCCGTACAAGCCCCCAGCACACCTACCTCCCCGCTCCCCAACCTTACTAAAATGACGCAT ATCCTCATCACCCACGCAACGCTGATGTCCCTCTCCTTCGTCCTCTTCTACCCGCTCGCTGCTCTGCTCATGCCA CTTCCTATATCCCTCCCTGTCGAGAAGTTCCGGCTCCACATGCCACTCCAGATCTTCACGATGCTCATGACGCTT GCTGGCTTCGGATGCGGAATTTACCTCGCGTATGAGACGGGGCAGTTGAAGACGGCGCACCCTATCCTGGGGATT ATTGTGGTCGGGGTGTTGGTGCTGTTTCAGCCGGCGATGGGGTGGTTGCAGCATTGGGGGTTCTTGAGGACGGGG GGGAGGACGGTGTGGGGGGTGTGTCATAGGTGGCTTGGGAGGGGGGTTATTGTGGTGGGTGTGGTTAATGGGGGG ATTGGGTTGCATGCTGCTAGGGGGATGGGGATGGCGCCGTTGGGGGCGGTCATTGGGTATGCGGTTGTGGCGGGC GTGGTTGGAGTGGTTTATGTGGTGGGTGTGCTGGTGGGGTGGGTGGTGGAGAGGAGGAGGAAGCGGGTGGAGGGG GAGAGGGTAGATGGGGAGGGAGTTGGGGAGGTGCAGAGGGGGGAAAGTGTGGAGGGGAGGGATGTGCGGGAGAAT GATGGGGAGAAGGGAGGGAGTGTGGAGGAGAGGGATGGTTAG |
Gene | >Ani_SJS72_1|g9937.t1 ATGAAGTGGCTCAACCTCCTCCCCATAGCCTTAGGGCTAGGTACCACACCCTCCTCACTACCACCTCTACACATC CATCAAACCATACTAACCAAGCTGATTACCAGCCAACGCAAGCATCATCTCCTTCTCCCCCCCAACCAACCCGGA CATCATCTACAGCCTCACCATCCCCAACACCACGACTCTCTCCACCCCAGGTCCCATCTACATCCAAATCACCGC CCCAACCTCCATCCAATGGGTCGGCCTCGGCCAAGGCGCCCAAATGACCGGCGCCAACATGTTCCTCCTGTACAC CTCGTCATCCACCAAAATAACCCTCTCCCCGCGCTCCGGCCTCGGCCACTTCGAACCCCAATACACAAGCAACAC CCAAATCACCATGCTCCCGGGCACCGGCATCTCCACCATCAACTCCACCACCGCCGCCCTCACCAACAGCTCATC CTCCTCCTCCGACAACACCAGAACAACCATGACGGCCAACTTCCGCTGCGACAACTGTCTCACCTGGCAAGACGG CACCGGCACGATGAACCCCAAGGACCCGAACTTCCCATTCATCTGGGCCTATCGCGAGGGCGTCCCCATCAACTC AGCCGCCATGGACGCGGACATCTCAATCCACGACGACATGGGTGGTATCCAAGTCGATCTCACTCGGGCAGGTAT GCCCCCGCAACCTAACACCTCCACTACCGAGGACGACCAAATAAACCCCTTCACCAACTATAACCCAGCTACGGA CTCCGTCCCCGTACAAGCCCCCAGCACACCTACCTCCCCGCTCCCCAACCTTACTAAAATGACGCATATCCTCAT CACCCACGCAACGCTGATGTCCCTCTCCTTCGTCCTCTTCTACCCGCTCGCTGCTCTGCTCATGCCACTTCCTAT ATCCCTCCCTGTCGAGAAGTTCCGGCTCCACATGCCACTCCAGATCTTCACGATGCTCATGACGCTTGCTGGCTT CGGATGCGGAATTTACCTCGCGTATGAGACGGGGCAGTTGAAGACGGCGCACCCTATCCTGGGGATTATTGTGGT CGGGGTGTTGGTGCTGTTTCAGCCGGCGATGGGGTGGTTGCAGCATTGGGGGTTCTTGAGGACGGGGGGGAGGAC GGTGTGGGGGGTGTGTCATAGGTGGCTTGGGAGGGGGGTTATTGTGGTGGGTGTGGTTAATGGGGGGATTGGGTT GCATGCTGCTAGGGGGATGGGGATGGCGCCGTTGGGGGCGGTCATTGGGTATGCGGTTGTGGCGGGCGTGGTTGG AGTGGTTTATGTGGTGGGTGTGCTGGTGGGGTGGGTGGTGGAGAGGAGGAGGAAGCGGGTGGAGGGGGAGAGGGT AGATGGGGAGGGAGTTGGGGAGGTGCAGAGGGGGGAAAGTGTGGAGGGGAGGGATGTGCGGGAGAATGATGGGGA GAAGGGAGGGAGTGTGGAGGAGAGGGATGGTTAG |