© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g99.t1 |
| Gene name | |
| Location | scaffold_001:290271..292764 |
| Strand | + |
| Gene length (bp) | 2493 |
| Transcript length (bp) | 2358 |
| Coding sequence length (bp) | 2358 |
| Protein length (aa) | 786 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13920 | zf-C3HC4_3 | Zinc finger, C3HC4 type (RING finger) | 2.6E-07 | 115 | 161 |
| Orthofinder run ID | 3 |
| Orthogroup | 3307 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g99.t1 MSESQPAQAPGAQGQGRGGRRRGRGGGFGAARQPGQTDGHHHHSHDGAGRGARSRGQGPRRGGGSGGRDKQGRSG NKPEASAAGGQGDTNAQTASEGKGKQPVTTEESDDADDGEVCFICASKVDHTSVSPCNHRTCHICALRLRALYKN KACAHCRTESNYVIFTDDHAKRYEDFKDSDFSQMDENLGIKYENNDIFEDTVLLLRYNCPDRGCDVACLGWPDLH RHVKSKHGRVMCDLCTRNKKVFTHEHELFTNAELRKHERHGDDVPGAIDQSGFRGHPECGFCRQRFYGDDELYAH CRDRHERCHICDRRSSGRQQQYYIDYNALEDHFQKDHFLCLDQECLEKKFVVFESQMDLKAHQLECHPNGLSKDA RRDARTVDLSSFDIRTPYQPQRQRRGAGRGRDPNAEPLPVSSAQPLRRDEIAYQRQMAIQSAQSVSTRSFGGQLT RNDTQPVRAPARPTPTQTPPAATPVAEMEDLNLSADSGTPQEKARRLRHAAVVERASNLLGNDQNKLKEFRARVS SYRTTSISATELIDAFFSLFDTSSTELGKLIKELAEIYEDEGKRNALLKAWNDWRAINEDYPALPGPGGMLPGMS PGTVNGSGVGGKRVLRLKSSTAQSSRSYVGRSGAMPSSSSSSSAANPFPPLSSTTARSTPRSSTPAATTPWGAAA AAAPSAPTSAFSSATSSRSASRAPARPVNANSAEAFPALPAAPKPNVLMAGLTRGTVRWDDRHKPSGNAWASRND PGASSSNAEDDFPEFPAGGKKGKNKKGKQTLFHFG* |
| Coding | >Ani_SJS72_1|g99.t1 ATGTCCGAATCCCAGCCCGCCCAAGCTCCCGGAGCGCAAGGCCAAGGTCGGGGCGGCCGTCGACGAGGCCGCGGA GGAGGCTTTGGAGCTGCTCGCCAACCTGGACAAACCGATGGTCACCATCACCATTCCCATGATGGCGCTGGAAGG GGTGCGAGATCTAGGGGCCAGGGACCCCGTCGCGGAGGCGGCAGCGGAGGACGGGACAAGCAGGGTCGCTCGGGG AACAAGCCGGAGGCTTCTGCTGCAGGTGGACAGGGTGATACGAATGCTCAGACGGCGTCAGAAGGCAAGGGGAAG CAGCCTGTCACAACAGAAGAGTCCGATGATGCGGATGATGGCGAGGTCTGCTTTATTTGTGCTTCGAAGGTCGAC CATACCTCGGTCTCGCCGTGTAATCACCGGACTTGTCATATTTGTGCGCTGAGATTGAGAGCTTTGTACAAGAAT AAAGCTTGTGCACACTGTCGGACGGAATCCAACTATGTTATCTTCACGGATGACCATGCCAAGCGCTACGAGGAT TTCAAGGACTCCGATTTTTCGCAGATGGACGAAAATCTAGGAATCAAGTACGAGAACAACGACATCTTTGAAGAT ACAGTGTTGTTGTTGCGGTACAATTGCCCGGATAGAGGCTGTGATGTGGCTTGCTTGGGATGGCCTGACCTGCAT CGTCACGTCAAAAGCAAGCATGGCAGAGTGATGTGTGATCTTTGCACACGAAACAAGAAAGTGTTCACGCACGAG CATGAGCTCTTCACCAATGCAGAGTTGCGCAAGCACGAGAGGCATGGAGATGATGTGCCTGGTGCCATAGACCAG AGTGGGTTCAGAGGCCATCCTGAGTGTGGTTTCTGTCGGCAACGGTTCTATGGTGACGACGAATTATACGCACAT TGTCGTGACCGTCACGAAAGATGCCACATTTGTGACCGTCGCTCCAGCGGCCGCCAGCAACAGTACTACATCGAC TACAACGCTCTCGAAGACCACTTTCAGAAAGATCACTTCCTGTGCCTCGACCAGGAGTGTCTGGAGAAGAAGTTC GTCGTCTTCGAGTCCCAGATGGACCTCAAGGCACATCAACTTGAATGCCATCCCAACGGCCTTTCTAAGGACGCC AGACGCGACGCTCGCACTGTTGACCTGTCATCCTTTGATATCAGAACTCCTTACCAGCCTCAGCGCCAGCGTCGA GGTGCTGGTCGTGGACGCGATCCTAACGCGGAGCCTCTACCGGTGTCCAGCGCTCAGCCACTGCGAAGAGACGAG ATTGCGTATCAACGCCAGATGGCCATCCAAAGTGCACAGTCCGTGTCTACCCGCAGCTTCGGCGGCCAACTAACA CGCAACGATACTCAGCCTGTGCGTGCTCCGGCTCGTCCAACGCCCACACAGACCCCTCCCGCAGCCACGCCAGTT GCCGAGATGGAAGACCTCAACCTCAGTGCCGATTCGGGTACTCCTCAAGAAAAAGCCCGCCGTCTCCGCCATGCG GCTGTCGTCGAAAGAGCCTCGAACCTCCTAGGCAACGACCAGAACAAGCTCAAGGAATTCCGTGCCCGGGTTTCC AGCTACCGCACCACCTCAATCTCCGCCACAGAACTCATCGACGCCTTCTTTTCGCTCTTTGATACCTCCAGCACC GAACTGGGCAAACTCATCAAAGAACTCGCCGAGATCTACGAAGACGAAGGCAAGCGCAACGCCCTCCTCAAGGCC TGGAATGACTGGCGTGCCATCAATGAAGACTACCCAGCTCTGCCCGGCCCCGGCGGCATGCTTCCCGGCATGTCC CCAGGAACCGTGAACGGCAGCGGAGTGGGAGGAAAGCGTGTCCTGCGCCTCAAATCCTCAACAGCCCAGTCCTCC CGTTCCTACGTTGGTAGAAGCGGTGCTATGCCTTCATCATCCTCCTCTTCCTCAGCCGCTAACCCCTTCCCCCCT CTCTCCTCGACCACCGCCCGCTCTACCCCCCGATCTTCCACCCCCGCTGCCACTACTCCCTGGGGCGCCGCCGCG GCCGCAGCTCCCTCAGCCCCGACCTCTGCCTTCAGCAGCGCCACCTCTTCCCGCTCCGCCTCGCGCGCCCCGGCG CGCCCAGTCAACGCCAACAGCGCCGAAGCCTTCCCTGCTCTCCCTGCTGCGCCTAAGCCCAACGTCCTCATGGCA GGTCTGACTCGCGGCACCGTCCGCTGGGACGACCGTCACAAGCCATCCGGGAATGCCTGGGCCTCTCGGAACGAC CCCGGCGCTAGCTCGTCCAATGCAGAGGATGATTTCCCCGAGTTCCCTGCAGGAGGCAAGAAGGGCAAGAACAAG AAGGGAAAGCAGACTCTGTTCCATTTCGGATAA |
| Transcript | >Ani_SJS72_1|g99.t1 ATGTCCGAATCCCAGCCCGCCCAAGCTCCCGGAGCGCAAGGCCAAGGTCGGGGCGGCCGTCGACGAGGCCGCGGA GGAGGCTTTGGAGCTGCTCGCCAACCTGGACAAACCGATGGTCACCATCACCATTCCCATGATGGCGCTGGAAGG GGTGCGAGATCTAGGGGCCAGGGACCCCGTCGCGGAGGCGGCAGCGGAGGACGGGACAAGCAGGGTCGCTCGGGG AACAAGCCGGAGGCTTCTGCTGCAGGTGGACAGGGTGATACGAATGCTCAGACGGCGTCAGAAGGCAAGGGGAAG CAGCCTGTCACAACAGAAGAGTCCGATGATGCGGATGATGGCGAGGTCTGCTTTATTTGTGCTTCGAAGGTCGAC CATACCTCGGTCTCGCCGTGTAATCACCGGACTTGTCATATTTGTGCGCTGAGATTGAGAGCTTTGTACAAGAAT AAAGCTTGTGCACACTGTCGGACGGAATCCAACTATGTTATCTTCACGGATGACCATGCCAAGCGCTACGAGGAT TTCAAGGACTCCGATTTTTCGCAGATGGACGAAAATCTAGGAATCAAGTACGAGAACAACGACATCTTTGAAGAT ACAGTGTTGTTGTTGCGGTACAATTGCCCGGATAGAGGCTGTGATGTGGCTTGCTTGGGATGGCCTGACCTGCAT CGTCACGTCAAAAGCAAGCATGGCAGAGTGATGTGTGATCTTTGCACACGAAACAAGAAAGTGTTCACGCACGAG CATGAGCTCTTCACCAATGCAGAGTTGCGCAAGCACGAGAGGCATGGAGATGATGTGCCTGGTGCCATAGACCAG AGTGGGTTCAGAGGCCATCCTGAGTGTGGTTTCTGTCGGCAACGGTTCTATGGTGACGACGAATTATACGCACAT TGTCGTGACCGTCACGAAAGATGCCACATTTGTGACCGTCGCTCCAGCGGCCGCCAGCAACAGTACTACATCGAC TACAACGCTCTCGAAGACCACTTTCAGAAAGATCACTTCCTGTGCCTCGACCAGGAGTGTCTGGAGAAGAAGTTC GTCGTCTTCGAGTCCCAGATGGACCTCAAGGCACATCAACTTGAATGCCATCCCAACGGCCTTTCTAAGGACGCC AGACGCGACGCTCGCACTGTTGACCTGTCATCCTTTGATATCAGAACTCCTTACCAGCCTCAGCGCCAGCGTCGA GGTGCTGGTCGTGGACGCGATCCTAACGCGGAGCCTCTACCGGTGTCCAGCGCTCAGCCACTGCGAAGAGACGAG ATTGCGTATCAACGCCAGATGGCCATCCAAAGTGCACAGTCCGTGTCTACCCGCAGCTTCGGCGGCCAACTAACA CGCAACGATACTCAGCCTGTGCGTGCTCCGGCTCGTCCAACGCCCACACAGACCCCTCCCGCAGCCACGCCAGTT GCCGAGATGGAAGACCTCAACCTCAGTGCCGATTCGGGTACTCCTCAAGAAAAAGCCCGCCGTCTCCGCCATGCG GCTGTCGTCGAAAGAGCCTCGAACCTCCTAGGCAACGACCAGAACAAGCTCAAGGAATTCCGTGCCCGGGTTTCC AGCTACCGCACCACCTCAATCTCCGCCACAGAACTCATCGACGCCTTCTTTTCGCTCTTTGATACCTCCAGCACC GAACTGGGCAAACTCATCAAAGAACTCGCCGAGATCTACGAAGACGAAGGCAAGCGCAACGCCCTCCTCAAGGCC TGGAATGACTGGCGTGCCATCAATGAAGACTACCCAGCTCTGCCCGGCCCCGGCGGCATGCTTCCCGGCATGTCC CCAGGAACCGTGAACGGCAGCGGAGTGGGAGGAAAGCGTGTCCTGCGCCTCAAATCCTCAACAGCCCAGTCCTCC CGTTCCTACGTTGGTAGAAGCGGTGCTATGCCTTCATCATCCTCCTCTTCCTCAGCCGCTAACCCCTTCCCCCCT CTCTCCTCGACCACCGCCCGCTCTACCCCCCGATCTTCCACCCCCGCTGCCACTACTCCCTGGGGCGCCGCCGCG GCCGCAGCTCCCTCAGCCCCGACCTCTGCCTTCAGCAGCGCCACCTCTTCCCGCTCCGCCTCGCGCGCCCCGGCG CGCCCAGTCAACGCCAACAGCGCCGAAGCCTTCCCTGCTCTCCCTGCTGCGCCTAAGCCCAACGTCCTCATGGCA GGTCTGACTCGCGGCACCGTCCGCTGGGACGACCGTCACAAGCCATCCGGGAATGCCTGGGCCTCTCGGAACGAC CCCGGCGCTAGCTCGTCCAATGCAGAGGATGATTTCCCCGAGTTCCCTGCAGGAGGCAAGAAGGGCAAGAACAAG AAGGGAAAGCAGACTCTGTTCCATTTCGGATAA |
| Gene | >Ani_SJS72_1|g99.t1 ATGTCCGAATCCCAGCCCGCCCAAGCTCCCGGAGCGCAAGGCCAAGGTCGGGGCGGCCGTCGACGAGGCCGCGGA GGAGGCTTTGGAGCTGCTCGCCAACCTGGACAAACCGATGGTCACCATCACCATTCCCATGATGGCGCTGGAAGG GGTGCGAGATCTAGGGGCCAGGGACCCCGTCGCGGAGGCGGCAGCGGAGGACGGGACAAGCAGGGTCGCTCGGGG AACAAGCCGGAGGCTTCTGCTGCAGGTGGACAGGGTGATACGAATGCTCAGACGGCGTCAGAAGGCAAGGGGAAG CAGCCTGTCACAACAGAAGAGTCCGATGATGCGGATGATGGCGAGGTCTGCTTTATTTGTGCTTCGAAGGTCGAC CATACCTCGGTCTCGCCGTGTAATCACCGGACTTGTCATATTTGTGCGCTGAGATTGAGAGCTTTGTACAAGAAT AAAGCTTGTGCACACTGTCGGGTATGTGTCTTGTCTGATTGTCTTCTCTGGTCTTCGTTGTGGCTATGCGCTGAC ATTCGCTTTTGGATTAGACGGAATCCAACTATGTTATCTTCACGGATGACCATGCCAAGCGCTACGAGGATTTCA AGGACTCCGATTTTTCGCAGATGGACGAAAATCTAGGAATCAAGTACGAGAACAACGACATCTTTGAAGATACAG TGTTGTTGTTGCGGTACAATTGCCCGGATAGAGGCTGTGATGTGGCTTGCTTGGGATGGCCTGACCTGCATCGTC ACGTCAAAAGCAAGCATGGCAGAGTGATGTGGTAAGTTCCTTCTACCGTTGGATGCGATGAGCTGTGTAGGCGCA TACTGACTTCAATGTCCCAGTGATCTTTGCACACGAAACAAGAAAGTGTTCACGCACGAGCATGAGCTCTTCACC AATGCAGAGTTGCGCAAGCACGAGAGGCATGGAGATGATGTGCCTGGTGCCATAGACCAGAGTGGGTTCAGAGGC CATCCTGAGTGTGGTTTCTGTCGGCAACGGTTCTATGGTGACGACGAATTATACGCACATTGTCGTGACCGTCAC GAAAGATGCCACATTTGTGACCGTCGCTCCAGCGGCCGCCAGCAACAGTACTACATCGACTACAACGCTCTCGAA GACCACTTTCAGAAAGATCACTTCCTGTGCCTCGACCAGGAGTGTCTGGAGAAGAAGTTCGTCGTCTTCGAGTCC CAGATGGACCTCAAGGCACATCAACTTGAATGCCATCCCAACGGCCTTTCTAAGGACGCCAGACGCGACGCTCGC ACTGTTGACCTGTCATCCTTTGATATCAGAACTCCTTACCAGCCTCAGCGCCAGCGTCGAGGTGCTGGTCGTGGA CGCGATCCTAACGCGGAGCCTCTACCGGTGTCCAGCGCTCAGCCACTGCGAAGAGACGAGATTGCGTATCAACGC CAGATGGCCATCCAAAGTGCACAGTCCGTGTCTACCCGCAGCTTCGGCGGCCAACTAACACGCAACGATACTCAG CCTGTGCGTGCTCCGGCTCGTCCAACGCCCACACAGACCCCTCCCGCAGCCACGCCAGTTGCCGAGATGGAAGAC CTCAACCTCAGTGCCGATTCGGGTACTCCTCAAGAAAAAGCCCGCCGTCTCCGCCATGCGGCTGTCGTCGAAAGA GCCTCGAACCTCCTAGGCAACGACCAGAACAAGCTCAAGGAATTCCGTGCCCGGGTTTCCAGCTACCGCACCACC TCAATCTCCGCCACAGAACTCATCGACGCCTTCTTTTCGCTCTTTGATACCTCCAGCACCGAACTGGGCAAACTC ATCAAAGAACTCGCCGAGATCTACGAAGACGAAGGCAAGCGCAACGCCCTCCTCAAGGCCTGGAATGACTGGCGT GCCATCAATGAAGACTACCCAGCTCTGCCCGGCCCCGGCGGCATGCTTCCCGGCATGTCCCCAGGAACCGTGAAC GGCAGCGGAGTGGGAGGAAAGCGTGTCCTGCGCCTCAAATCCTCAACAGCCCAGTCCTCCCGTTCCTACGTTGGT AGAAGCGGTGCTATGCCTTCATCATCCTCCTCTTCCTCAGCCGCTAACCCCTTCCCCCCTCTCTCCTCGACCACC GCCCGCTCTACCCCCCGATCTTCCACCCCCGCTGCCACTACTCCCTGGGGCGCCGCCGCGGCCGCAGCTCCCTCA GCCCCGACCTCTGCCTTCAGCAGCGCCACCTCTTCCCGCTCCGCCTCGCGCGCCCCGGCGCGCCCAGTCAACGCC AACAGCGCCGAAGCCTTCCCTGCTCTCCCTGCTGCGCCTAAGCCCAACGTCCTCATGGCAGGTCTGACTCGCGGC ACCGTCCGCTGGGACGACCGTCACAAGCCATCCGGGAATGCCTGGGCCTCTCGGAACGACCCCGGCGCTAGCTCG TCCAATGCAGAGGATGATTTCCCCGAGTTCCCTGCAGGAGGCAAGAAGGGCAAGAACAAGAAGGGAAAGCAGACT CTGTTCCATTTCGGATAA |