© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g9898.t1 |
| Gene name | |
| Location | scaffold_117:46383..47205 |
| Strand | + |
| Gene length (bp) | 822 |
| Transcript length (bp) | 756 |
| Coding sequence length (bp) | 756 |
| Protein length (aa) | 252 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 23 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 30 | 52 | 22 |
| 2 | 64 | 86 | 22 |
| 3 | 96 | 115 | 19 |
| 4 | 128 | 147 | 19 |
| 5 | 153 | 175 | 22 |
| 6 | 187 | 209 | 22 |
| 7 | 219 | 241 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g9898.t1 MPSPSFTLANHTPHLIIQPSDAALSPPESYLFVQDGLIISCGILYAFCYIFCMIRTYSDRTYPSASVKGIQFMSL TLAYELFYAVMTTTTTFELLAFLAWFLLDVGFVAVAIWRAHEKRDRAWLVRRIVGFVLAGVGVLKGLTMLWPDER EQVTAYWTGILLQLPIGWICLATLWKEWDTRGHSLEIWLMRYLGCYTAYGVFFWRYWNVPQNWEYVASVWSTGII LWTLLPETVYPFVYVWVHRTSKVKGE* |
| Coding | >Ani_SJS72_1|g9898.t1 ATGCCGTCACCATCATTCACCCTCGCCAACCACACTCCCCACCTGATAATACAACCTTCCGACGCTGCTCTCTCC CCACCTGAGAGCTACCTGTTCGTTCAGGATGGTCTTATAATTAGCTGTGGGATCCTCTACGCCTTCTGTTACATA TTTTGCATGATTCGCACATACAGTGACCGGACATACCCGTCTGCGTCAGTCAAGGGGATCCAATTCATGAGCCTA ACACTTGCCTACGAACTTTTCTACGCGGTGATGACTACAACTACCACCTTTGAGCTTCTTGCATTTCTGGCATGG TTTCTCCTTGACGTTGGTTTCGTCGCAGTGGCAATATGGCGAGCGCATGAAAAGCGCGATCGGGCGTGGCTCGTA CGGAGAATAGTGGGCTTCGTACTAGCGGGCGTAGGCGTGCTGAAGGGATTGACGATGCTGTGGCCAGATGAGAGG GAGCAGGTCACAGCGTACTGGACAGGGATTCTACTGCAGCTGCCGATCGGATGGATCTGTTTAGCGACCCTGTGG AAGGAGTGGGATACCAGAGGTCATTCGTTGGAGATCTGGCTCATGCGATACTTGGGCTGCTATACAGCCTACGGG GTTTTCTTCTGGAGGTATTGGAATGTGCCACAAAACTGGGAATATGTGGCGTCGGTGTGGAGTACAGGGATTATT TTGTGGACACTGCTGCCTGAAACGGTCTATCCATTTGTATATGTCTGGGTGCATCGCACATCCAAAGTTAAGGGC GAGTAG |
| Transcript | >Ani_SJS72_1|g9898.t1 ATGCCGTCACCATCATTCACCCTCGCCAACCACACTCCCCACCTGATAATACAACCTTCCGACGCTGCTCTCTCC CCACCTGAGAGCTACCTGTTCGTTCAGGATGGTCTTATAATTAGCTGTGGGATCCTCTACGCCTTCTGTTACATA TTTTGCATGATTCGCACATACAGTGACCGGACATACCCGTCTGCGTCAGTCAAGGGGATCCAATTCATGAGCCTA ACACTTGCCTACGAACTTTTCTACGCGGTGATGACTACAACTACCACCTTTGAGCTTCTTGCATTTCTGGCATGG TTTCTCCTTGACGTTGGTTTCGTCGCAGTGGCAATATGGCGAGCGCATGAAAAGCGCGATCGGGCGTGGCTCGTA CGGAGAATAGTGGGCTTCGTACTAGCGGGCGTAGGCGTGCTGAAGGGATTGACGATGCTGTGGCCAGATGAGAGG GAGCAGGTCACAGCGTACTGGACAGGGATTCTACTGCAGCTGCCGATCGGATGGATCTGTTTAGCGACCCTGTGG AAGGAGTGGGATACCAGAGGTCATTCGTTGGAGATCTGGCTCATGCGATACTTGGGCTGCTATACAGCCTACGGG GTTTTCTTCTGGAGGTATTGGAATGTGCCACAAAACTGGGAATATGTGGCGTCGGTGTGGAGTACAGGGATTATT TTGTGGACACTGCTGCCTGAAACGGTCTATCCATTTGTATATGTCTGGGTGCATCGCACATCCAAAGTTAAGGGC GAGTAG |
| Gene | >Ani_SJS72_1|g9898.t1 ATGCCGTCACCATCATTCACCCTCGCCAACCACACTCCCCACCTGATAATACAACCTTCCGACGCTGCTCTCTCC CCACCTGAGAGCTACCTGTTCGTTCAGGATGGTCTTATAATTAGCTGTGGGATCCTCTACGCCTTCTGTTACATA TTTTGCATGATTCGCACATACAGTGACCGGACATACCCGTCTGCGTCAGTCAAGGGGATCCAATTCATGAGCCTA ACACTTGCCTACGAACTTTTCTACGCGGTGATGACTACAACTACCACCTTTGAGCTTCTTGCATTTCTGGCATGG TTTCTCCTTGACGTTGGTTTCGTCGCAGTGGCAATATGGCGAGCGCATGAAAAGCGCGATCGGGCGTGGCTCGTA CGGAGAATAGTGGGCTTCGTACTAGCGGGCGTAGGCGTGCTGAAGGGATTGACGATGCTGTGGCCAGATGAGAGG GAGCAGGTCACAGCGTACTGGACAGGGATTCTACTGCAGCTGCCGATCGGATGGATCTGTTTAGCGACCCTGTGG AAGGAGTGGGATACCAGAGGTCATTCGTTGGAGATCTGGTATGTGCTTTGTAATTGACTGCTTGCGTTTTACACC GCTGTAGAAGATGCTGACGGGGATACCAGGCTCATGCGATACTTGGGCTGCTATACAGCCTACGGGGTTTTCTTC TGGAGGTATTGGAATGTGCCACAAAACTGGGAATATGTGGCGTCGGTGTGGAGTACAGGGATTATTTTGTGGACA CTGCTGCCTGAAACGGTCTATCCATTTGTATATGTCTGGGTGCATCGCACATCCAAAGTTAAGGGCGAGTAG |