Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ani_SJS72_1\|g9831.t1
Gene name
Location	scaffold_115:13139..13740
Strand	+
Gene length (bp)	601
Transcript length (bp)	531
Coding sequence length (bp)	531
Protein length (aa)	177

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF05620	TMEM208_SND2	SRP-independent targeting protein 2/TMEM208	1.6E-58	1	169

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 16	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	21	38	17
2	113	132	19

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ani_SJS72_1\|g9831.t1 MAQKAAKTLAARNASLLTRTHLISFALHFLFLALHWLFNRPRSLTPYFTLACPTLIIEFYLERLGRPVYNPADGS LRSPGEDLGAAGLTEYMWDVLYWTWGCIGAACLFGDRAWWLWIVVPVYSVWLAYSTFMGMKSGLAGMGGAGAGAG QEQGGAAESKRQKKMEKRGARGVQYR*
Coding	>Ani_SJS72_1\|g9831.t1 ATGGCTCAAAAAGCCGCCAAAACCCTCGCCGCGCGCAACGCGTCCCTCCTCACCCGCACCCACCTCATCAGTTTC GCCCTACACTTCCTCTTCCTCGCTCTCCACTGGCTCTTCAACCGCCCTCGCTCTCTAACCCCCTACTTCACACTC GCCTGCCCGACCCTCATCATCGAATTCTACCTCGAACGGCTCGGCCGCCCGGTCTACAACCCCGCTGATGGATCC CTCCGCTCTCCCGGAGAGGATCTCGGCGCCGCAGGACTGACGGAATACATGTGGGACGTGCTGTACTGGACGTGG GGGTGCATTGGTGCTGCCTGCTTGTTTGGCGATCGTGCTTGGTGGTTGTGGATCGTCGTGCCAGTGTATTCGGTG TGGTTGGCGTACAGTACCTTTATGGGCATGAAGAGTGGGTTGGCAGGGATGGGTGGTGCTGGTGCGGGTGCTGGG CAGGAGCAAGGAGGTGCGGCGGAGAGTAAGAGGCAGAAGAAGATGGAGAAGAGGGGTGCCAGGGGGGTGCAGTAT CGCTGA
Transcript	>Ani_SJS72_1\|g9831.t1 ATGGCTCAAAAAGCCGCCAAAACCCTCGCCGCGCGCAACGCGTCCCTCCTCACCCGCACCCACCTCATCAGTTTC GCCCTACACTTCCTCTTCCTCGCTCTCCACTGGCTCTTCAACCGCCCTCGCTCTCTAACCCCCTACTTCACACTC GCCTGCCCGACCCTCATCATCGAATTCTACCTCGAACGGCTCGGCCGCCCGGTCTACAACCCCGCTGATGGATCC CTCCGCTCTCCCGGAGAGGATCTCGGCGCCGCAGGACTGACGGAATACATGTGGGACGTGCTGTACTGGACGTGG GGGTGCATTGGTGCTGCCTGCTTGTTTGGCGATCGTGCTTGGTGGTTGTGGATCGTCGTGCCAGTGTATTCGGTG TGGTTGGCGTACAGTACCTTTATGGGCATGAAGAGTGGGTTGGCAGGGATGGGTGGTGCTGGTGCGGGTGCTGGG CAGGAGCAAGGAGGTGCGGCGGAGAGTAAGAGGCAGAAGAAGATGGAGAAGAGGGGTGCCAGGGGGGTGCAGTAT CGCTGA
Gene	>Ani_SJS72_1\|g9831.t1 ATGGCTCAAGTTCGTCCACCCCACCCCCCTCCTTAAACTAAAACCCTCACATTCAACCAACTAATCTCCACCCCC ATAGAAAGCCGCCAAAACCCTCGCCGCGCGCAACGCGTCCCTCCTCACCCGCACCCACCTCATCAGTTTCGCCCT ACACTTCCTCTTCCTCGCTCTCCACTGGCTCTTCAACCGCCCTCGCTCTCTAACCCCCTACTTCACACTCGCCTG CCCGACCCTCATCATCGAATTCTACCTCGAACGGCTCGGCCGCCCGGTCTACAACCCCGCTGATGGATCCCTCCG CTCTCCCGGAGAGGATCTCGGCGCCGCAGGACTGACGGAATACATGTGGGACGTGCTGTACTGGACGTGGGGGTG CATTGGTGCTGCCTGCTTGTTTGGCGATCGTGCTTGGTGGTTGTGGATCGTCGTGCCAGTGTATTCGGTGTGGTT GGCGTACAGTACCTTTATGGGCATGAAGAGTGGGTTGGCAGGGATGGGTGGTGCTGGTGCGGGTGCTGGGCAGGA GCAAGGAGGTGCGGCGGAGAGTAAGAGGCAGAAGAAGATGGAGAAGAGGGGTGCCAGGGGGGTGCAGTATCGCTG A

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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