Protein ID | Ani_SJS72_1|g9830.t1 |
Gene name | |
Location | scaffold_115:9446..12094 |
Strand | - |
Gene length (bp) | 2648 |
Transcript length (bp) | 2430 |
Coding sequence length (bp) | 2430 |
Protein length (aa) | 810 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00515 | TPR_1 | Tetratricopeptide repeat | 1.6E-07 | 585 | 617 |
PF00515 | TPR_1 | Tetratricopeptide repeat | 3.0E-07 | 653 | 685 |
PF07719 | TPR_2 | Tetratricopeptide repeat | 1.9E-05 | 584 | 616 |
PF07719 | TPR_2 | Tetratricopeptide repeat | 6.1E-05 | 653 | 685 |
PF07719 | TPR_2 | Tetratricopeptide repeat | 5.4E-05 | 754 | 786 |
PF12895 | ANAPC3 | Anaphase-promoting complex, cyclosome, subunit 3 | 2.3E-25 | 21 | 101 |
PF13181 | TPR_8 | Tetratricopeptide repeat | 5.3E-03 | 585 | 616 |
PF13181 | TPR_8 | Tetratricopeptide repeat | 5.7E-03 | 653 | 685 |
PF13181 | TPR_8 | Tetratricopeptide repeat | 4.4E-02 | 754 | 786 |
PF14559 | TPR_19 | Tetratricopeptide repeat | 2.6E-07 | 698 | 763 |
PF13432 | TPR_16 | Tetratricopeptide repeat | 2.4E-04 | 623 | 682 |
PF13432 | TPR_16 | Tetratricopeptide repeat | 9.8E-04 | 693 | 754 |
GO Term | Description | Terminal node |
---|---|---|
GO:0005515 | protein binding | Yes |
GO:0003674 | molecular_function | No |
GO:0005488 | binding | No |
Orthofinder run ID | 3 |
Orthogroup | 3463 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS72_1|g9830.t1 MSPSTAHISSQLRQLIYYHLDNNLVRNALFLAGRLHAYEPRAAESSYLLALCHLQSGQVKAAYDYSKNFGWRGTH LGCAYVFAQACLDLGKYPEGITALERSKGLWSTKNHWGKHSETRRQHLPDAAAVLCLQGKLFYAHNELNAAVECY VDALKLNPFMWDAFLGLCETGVNIRVPNIFKMTPELNALLASSSQDDLDLSSDKAAHSAGPLQSQPKLNSSTDPF TSLTSRTEAVGTHGSSALWEKLNGSTVSVASTGTSAVPAFREGTETPGGQSSESDDRTMHRADAPLEPPLAPARK NRTIQTISADHGMDSPPKMKPTGIRPRTRTKPEPDEPATTYTERELSQGVRVGDRKRTVSGSVAHSAQQPTEPGA PQRRSVRLFNQIKPTTSKLSSSALGTKDGREMKKVRATGAKGRTTTAPSVGRVVSGNRKHIGDTHDGETKDHRPA TSASNGTNHTSSRGPSLDRSKAVEALTWLLELFSKLASGYFALCRYRCAEATQIFAALSQGQRETPWVLSQIGRA YYEQAMYSEAEKYFVRVKSMAPSRLEDMEIYSTVLWHLKNDVELAYLAHELMETDRLSPQAWCAVGNSFSHQRDH DQALKCFKRATQLDPHFAYGFTLQGHEYVANEEYDKALDAYRHGISADSRHYNAWYGLGTVYDKMGKLEFAEQHF RNAANINPTNAVLICCIGLVLEKMNNPRGALAQYGRACQLAPHSVLARFRKARVLMKLSELKLALTELKVLKDMA PDEANVHYLLGKLYKMLHEKANAIKHFTTALNLDPKAAQYIKDAMESLDDDEEDDEDMA* |
Coding | >Ani_SJS72_1|g9830.t1 ATGTCACCCTCCACCGCACATATATCGAGCCAACTTAGGCAATTAATATACTACCATCTTGATAACAACCTCGTC CGTAATGCGCTTTTCCTTGCCGGTCGGTTGCACGCCTACGAACCCCGAGCAGCGGAATCTTCATATTTACTCGCC TTATGCCATCTCCAGAGTGGTCAAGTGAAAGCAGCATACGACTACAGCAAGAACTTTGGATGGCGAGGCACTCAC CTGGGCTGCGCATATGTGTTCGCCCAGGCGTGCCTGGACCTGGGAAAATATCCTGAAGGCATCACGGCATTGGAA CGAAGCAAAGGGCTCTGGTCCACAAAGAACCATTGGGGAAAACACAGCGAGACGCGCAGGCAACATTTACCCGAT GCGGCAGCGGTGCTGTGTCTACAGGGCAAGCTCTTCTATGCGCATAATGAACTGAATGCGGCTGTTGAATGCTAT GTCGACGCGCTCAAGTTGAACCCGTTCATGTGGGACGCTTTCTTGGGCTTGTGTGAGACCGGGGTCAATATCCGC GTCCCCAACATCTTCAAGATGACACCTGAACTGAACGCTTTGTTAGCGTCCTCCTCACAAGATGACTTAGATTTG TCTTCGGATAAGGCAGCACATTCTGCAGGTCCCTTGCAGTCACAACCGAAACTGAACTCAAGCACCGATCCCTTT ACATCTTTGACGTCTCGGACTGAGGCAGTCGGCACCCATGGGAGCTCCGCTCTCTGGGAAAAGCTCAATGGCAGC ACGGTCAGCGTGGCATCCACCGGCACATCAGCAGTTCCGGCATTTCGAGAAGGGACCGAAACACCTGGAGGCCAA AGCAGTGAGTCGGATGACCGCACCATGCACCGGGCAGACGCGCCATTGGAGCCGCCCTTGGCGCCTGCACGGAAG AACCGAACGATACAGACGATTAGTGCCGATCACGGCATGGACTCCCCACCAAAGATGAAGCCCACGGGTATCCGA CCCCGAACCAGAACCAAGCCTGAGCCCGATGAGCCGGCCACAACGTATACGGAACGAGAACTCTCACAAGGAGTC CGTGTGGGTGACCGCAAGCGAACTGTCTCTGGATCAGTTGCCCATTCTGCACAGCAACCCACCGAACCTGGCGCG CCGCAACGACGGAGCGTCCGCCTTTTCAACCAGATAAAGCCTACTACGAGCAAGCTTTCTAGTTCCGCGCTGGGG ACGAAGGATGGCCGAGAAATGAAGAAGGTAAGGGCTACCGGTGCGAAGGGTCGAACTACAACCGCTCCCAGTGTG GGTCGAGTCGTCAGCGGCAATCGAAAACACATCGGTGACACACATGATGGTGAGACCAAGGACCACCGCCCAGCC ACATCGGCATCAAATGGGACCAACCACACTTCTTCGAGAGGACCTTCACTTGATCGGTCTAAAGCTGTGGAGGCA TTGACATGGCTGTTAGAGCTATTTTCGAAGCTGGCGTCCGGATACTTTGCGTTGTGTCGCTATCGTTGCGCTGAA GCTACCCAGATCTTCGCAGCTTTGTCGCAGGGCCAGAGGGAGACCCCATGGGTACTGTCGCAAATCGGACGAGCA TACTACGAACAGGCGATGTATTCCGAAGCCGAGAAATACTTTGTCCGGGTGAAAAGCATGGCTCCGTCTCGGCTG GAGGATATGGAAATCTACTCAACCGTGCTCTGGCATTTAAAAAATGATGTCGAGCTGGCCTATTTGGCGCACGAG CTCATGGAAACAGACCGTCTCTCGCCTCAGGCCTGGTGCGCTGTTGGCAACTCATTTTCGCACCAGCGGGACCAT GACCAGGCTTTGAAATGCTTCAAGCGAGCCACGCAACTTGATCCTCATTTCGCATACGGTTTCACTCTGCAAGGA CATGAATATGTGGCCAATGAAGAGTACGACAAGGCTCTCGATGCGTATCGACACGGAATTAGCGCTGACAGTCGC CATTATAACGCCTGGTATGGGTTGGGTACGGTATACGACAAGATGGGCAAGCTCGAGTTTGCCGAACAGCATTTC CGCAATGCGGCTAACATCAATCCGACGAATGCGGTGCTCATCTGCTGCATCGGACTGGTATTGGAGAAGATGAAC AACCCCCGCGGGGCCCTCGCTCAGTACGGGCGGGCCTGTCAACTGGCACCTCACTCGGTTCTCGCTCGCTTCCGC AAGGCTCGCGTACTGATGAAGCTTTCGGAGCTGAAGTTGGCGCTGACCGAGCTGAAGGTGCTTAAGGATATGGCA CCAGATGAGGCCAACGTGCATTATCTGCTGGGTAAACTCTACAAGATGTTGCATGAGAAGGCCAATGCTATCAAG CATTTCACGACCGCATTGAATTTGGATCCCAAGGCGGCACAATACATCAAGGATGCCATGGAATCCCTGGACGAT GATGAAGAGGATGACGAAGATATGGCATGA |
Transcript | >Ani_SJS72_1|g9830.t1 ATGTCACCCTCCACCGCACATATATCGAGCCAACTTAGGCAATTAATATACTACCATCTTGATAACAACCTCGTC CGTAATGCGCTTTTCCTTGCCGGTCGGTTGCACGCCTACGAACCCCGAGCAGCGGAATCTTCATATTTACTCGCC TTATGCCATCTCCAGAGTGGTCAAGTGAAAGCAGCATACGACTACAGCAAGAACTTTGGATGGCGAGGCACTCAC CTGGGCTGCGCATATGTGTTCGCCCAGGCGTGCCTGGACCTGGGAAAATATCCTGAAGGCATCACGGCATTGGAA CGAAGCAAAGGGCTCTGGTCCACAAAGAACCATTGGGGAAAACACAGCGAGACGCGCAGGCAACATTTACCCGAT GCGGCAGCGGTGCTGTGTCTACAGGGCAAGCTCTTCTATGCGCATAATGAACTGAATGCGGCTGTTGAATGCTAT GTCGACGCGCTCAAGTTGAACCCGTTCATGTGGGACGCTTTCTTGGGCTTGTGTGAGACCGGGGTCAATATCCGC GTCCCCAACATCTTCAAGATGACACCTGAACTGAACGCTTTGTTAGCGTCCTCCTCACAAGATGACTTAGATTTG TCTTCGGATAAGGCAGCACATTCTGCAGGTCCCTTGCAGTCACAACCGAAACTGAACTCAAGCACCGATCCCTTT ACATCTTTGACGTCTCGGACTGAGGCAGTCGGCACCCATGGGAGCTCCGCTCTCTGGGAAAAGCTCAATGGCAGC ACGGTCAGCGTGGCATCCACCGGCACATCAGCAGTTCCGGCATTTCGAGAAGGGACCGAAACACCTGGAGGCCAA AGCAGTGAGTCGGATGACCGCACCATGCACCGGGCAGACGCGCCATTGGAGCCGCCCTTGGCGCCTGCACGGAAG AACCGAACGATACAGACGATTAGTGCCGATCACGGCATGGACTCCCCACCAAAGATGAAGCCCACGGGTATCCGA CCCCGAACCAGAACCAAGCCTGAGCCCGATGAGCCGGCCACAACGTATACGGAACGAGAACTCTCACAAGGAGTC CGTGTGGGTGACCGCAAGCGAACTGTCTCTGGATCAGTTGCCCATTCTGCACAGCAACCCACCGAACCTGGCGCG CCGCAACGACGGAGCGTCCGCCTTTTCAACCAGATAAAGCCTACTACGAGCAAGCTTTCTAGTTCCGCGCTGGGG ACGAAGGATGGCCGAGAAATGAAGAAGGTAAGGGCTACCGGTGCGAAGGGTCGAACTACAACCGCTCCCAGTGTG GGTCGAGTCGTCAGCGGCAATCGAAAACACATCGGTGACACACATGATGGTGAGACCAAGGACCACCGCCCAGCC ACATCGGCATCAAATGGGACCAACCACACTTCTTCGAGAGGACCTTCACTTGATCGGTCTAAAGCTGTGGAGGCA TTGACATGGCTGTTAGAGCTATTTTCGAAGCTGGCGTCCGGATACTTTGCGTTGTGTCGCTATCGTTGCGCTGAA GCTACCCAGATCTTCGCAGCTTTGTCGCAGGGCCAGAGGGAGACCCCATGGGTACTGTCGCAAATCGGACGAGCA TACTACGAACAGGCGATGTATTCCGAAGCCGAGAAATACTTTGTCCGGGTGAAAAGCATGGCTCCGTCTCGGCTG GAGGATATGGAAATCTACTCAACCGTGCTCTGGCATTTAAAAAATGATGTCGAGCTGGCCTATTTGGCGCACGAG CTCATGGAAACAGACCGTCTCTCGCCTCAGGCCTGGTGCGCTGTTGGCAACTCATTTTCGCACCAGCGGGACCAT GACCAGGCTTTGAAATGCTTCAAGCGAGCCACGCAACTTGATCCTCATTTCGCATACGGTTTCACTCTGCAAGGA CATGAATATGTGGCCAATGAAGAGTACGACAAGGCTCTCGATGCGTATCGACACGGAATTAGCGCTGACAGTCGC CATTATAACGCCTGGTATGGGTTGGGTACGGTATACGACAAGATGGGCAAGCTCGAGTTTGCCGAACAGCATTTC CGCAATGCGGCTAACATCAATCCGACGAATGCGGTGCTCATCTGCTGCATCGGACTGGTATTGGAGAAGATGAAC AACCCCCGCGGGGCCCTCGCTCAGTACGGGCGGGCCTGTCAACTGGCACCTCACTCGGTTCTCGCTCGCTTCCGC AAGGCTCGCGTACTGATGAAGCTTTCGGAGCTGAAGTTGGCGCTGACCGAGCTGAAGGTGCTTAAGGATATGGCA CCAGATGAGGCCAACGTGCATTATCTGCTGGGTAAACTCTACAAGATGTTGCATGAGAAGGCCAATGCTATCAAG CATTTCACGACCGCATTGAATTTGGATCCCAAGGCGGCACAATACATCAAGGATGCCATGGAATCCCTGGACGAT GATGAAGAGGATGACGAAGATATGGCATGA |
Gene | >Ani_SJS72_1|g9830.t1 ATGTCACCCTCCACCGCACATATATCGAGCCAACTTAGGCAATTAATATACTACCATCTTGATAACAACCTCGTC CGTAATGCGCTTTTCCTTGCCGGTCGGTTGCACGCCTACGAACCCCGAGCAGCGGAATCTTCATATTTACTCGCC TTATGCCATCTCCAGAGTGGTCAAGTGAAAGCAGCATACGACTACAGCAAGAACTTTGGATGGCGAGGCACTCAC CTGGGCTGCGCATATGTGTTCGCCCAGGCGTGCCTGGACCTGGGAAAATATCCTGAAGGCATCACGGCATTGGAA CGAAGCAAAGGGCTCTGGTCCACAAAGAACCATTGGGGTACGCTTTGTTAGGCATTTCTTTATATTATCTCGCTT GTCGCAAATGGACGCGACCAATTTTCTTGGCTGATCACAGCTGACATGTTCTTTTCGCGGTTTCCAGGAAAACAC AGCGAGACGCGCAGGCAACATTTACCCGATGCGGCAGCGGTGCTGTGTCTACAGGGCAAGCTCTTCTATGCGCAT AATGAACTGAATGCGGCTGTTGAATGCTATGTCGACGCGCTCAAGTTGAACCCGTTCATGTGGGACGCTTTCTTG GGCTTGTGTGAGACCGGTGAGTATCGCAAGCGGATAGGGAGAATGCTGTCGCTAATCGTTCAAAGGGGTCAATAT CCGCGTCCCCAACATCTTCAAGATGACACCTGAACTGAACGCTTTGTTAGCGTCCTCCTCACAAGATGACTTAGA TTTGTCTTCGGATAAGGCAGCACATTCTGCAGGTCCCTTGCAGTCACAACCGAAACTGAACTCAAGCACCGATCC CTTTACATCTTTGACGTCTCGGACTGAGGCAGTCGGCACCCATGGGAGCTCCGCTCTCTGGGAAAAGCTCAATGG CAGCACGGTCAGCGTGGCATCCACCGGCACATCAGCAGTTCCGGCATTTCGAGAAGGGACCGAAACACCTGGAGG CCAAAGCAGTGAGTCGGATGACCGCACCATGCACCGGGCAGACGCGCCATTGGAGCCGCCCTTGGCGCCTGCACG GAAGAACCGAACGATACAGACGATTAGTGCCGATCACGGCATGGACTCCCCACCAAAGATGAAGCCCACGGGTAT CCGACCCCGAACCAGAACCAAGCCTGAGCCCGATGAGCCGGCCACAACGTATACGGAACGAGAACTCTCACAAGG AGTCCGTGTGGGTGACCGCAAGCGAACTGTCTCTGGATCAGTTGCCCATTCTGCACAGCAACCCACCGAACCTGG CGCGCCGCAACGACGGAGCGTCCGCCTTTTCAACCAGATAAAGCCTACTACGAGCAAGCTTTCTAGTTCCGCGCT GGGGACGAAGGATGGCCGAGAAATGAAGAAGGTAAGGGCTACCGGTGCGAAGGGTCGAACTACAACCGCTCCCAG TGTGGGTCGAGTCGTCAGCGGCAATCGAAAACACATCGGTGACACACATGATGGTGAGACCAAGGACCACCGCCC AGCCACATCGGCATCAAATGGGACCAACCACACTTCTTCGAGAGGACCTTCACTTGATCGGTCTAAAGCTGTGGA GGCATTGACATGGCTGTTAGAGCTATTTTCGAAGCTGGCGTCCGGATACTTTGCGTTGTGTCGCTATCGTTGCGC TGAAGCTACCCAGATCTTCGCAGCTTTGTCGCAGGGCCAGAGGGAGACCCCATGGGTACTGTCGCAAATCGGACG AGCATACTACGAACAGGCGATGTATTCCGAAGCCGAGAAATACTTTGTCCGGGTGAAAAGCATGGCTCCGTCTCG GCTGGAGGATATGGAAATCTACTCAACCGTGCTCTGGCATTTAAAAAATGATGTCGAGCTGGCCTATTTGGCGCA CGAGCTCATGGAAACAGACCGTCTCTCGCCTCAGGCCTGGTGCGCTGTTGGCAACTCATTTTCGCACCAGCGGGA CCATGACCAGGCTTTGAAATGCTTCAAGCGAGCCACGCAACTTGATCCTCATTTCGCATACGGTTTCACTCTGCA AGGACATGAATATGTGGCCAATGAAGAGTACGACAAGGCTCTCGATGCGTATCGACACGGAATTAGCGCTGACAG TCGCCATTATAACGCCTGGTATGGGTTGGGTACGGTATACGACAAGATGGGCAAGCTCGAGTTTGCCGAACAGCA TTTCCGCAATGCGGCTAACATCAATCCGACGAATGCGGTGCTCATCTGCTGCATCGGACTGGTATTGGAGAAGAT GAACAACCCCCGCGGGGCCCTCGCTCAGTACGGGCGGGCCTGTCAACTGGCACCTCACTCGGTTCTCGCTCGCTT CCGCAAGGCTCGCGTACTGATGAAGCTTTCGGAGCTGAAGTTGGCGCTGACCGAGCTGAAGGTGCTTAAGGATAT GGCACCAGATGAGGCCAACGTGCATTATCTGCTGGGTAAACTCTACAAGATGTTGCATGAGAAGGCCAATGCTAT CAAGCATTTCACGACCGCATTGAATTTGGATCCCAAGGTAAGTTTAGGAGCCCTCATCCCATCCTCCGCCAAACT CGAATGCACCCGGCTAACTCCTTCAGGCGGCACAATACATCAAGGATGCCATGGAATCCCTGGACGATGATGAAG AGGATGACGAAGATATGGCATGA |