Protein ID | Ani_SJS72_1|g9812.t1 |
Gene name | |
Location | scaffold_114:38707..40003 |
Strand | - |
Gene length (bp) | 1296 |
Transcript length (bp) | 1296 |
Coding sequence length (bp) | 1296 |
Protein length (aa) | 432 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF04193 | PQ-loop | PQ loop repeat | 1.3E-17 | 42 | 99 |
PF04193 | PQ-loop | PQ loop repeat | 3.4E-18 | 258 | 315 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 37 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 35 | 57 | 22 |
2 | 74 | 96 | 22 |
3 | 101 | 123 | 22 |
4 | 288 | 310 | 22 |
5 | 344 | 366 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS72_1|g9812.t1 MPPPLLQQIHAVLPQHCEPTTPFLAAVSSYLHICLPTPLAFVSSVLGTLSIVSWLFAQLPQIYKNYQIQSTAGLS LFFLVEWCLGDTSNLLGALLTRQAGWQVIVAAYYVCVDVTLVFQYFWYTHYRGQYDGYGALAHSEYDRPPGSVLE GVSFSDNSSSDHAPRSTESPLPSNPKDMKDIKEPAVPSSNGQSPSYSNEKLSSSKRSITRSSSGPSLPIGSPRTL LLASMLCAVVANAAPTEQQTTSESSQKTLEILGRIISWMSTFLYLGSRPPQLYKNYCRKSTSGLSPLLFMAAFCG NLFYSASLLTNPNAWYDFPAYGGGGWADADGNDRLEWVTRATPFFLGAFGVLAFDGLMGVQFLMYGTRDDESIMQ VEDPKDGRSRWTRVRGWMRGWIPSVSPARRLRSDATVSSEENQSLLQNERERYGTV* |
Coding | >Ani_SJS72_1|g9812.t1 ATGCCTCCTCCTCTCTTACAACAGATTCATGCAGTGCTCCCGCAACACTGTGAACCGACAACCCCATTCCTCGCG GCCGTGTCCTCCTACCTCCACATCTGCCTCCCCACACCGTTAGCCTTCGTCTCCTCCGTTCTCGGAACCCTCAGC ATCGTGTCATGGCTCTTCGCTCAGCTCCCACAAATATACAAGAATTATCAAATCCAGTCGACGGCTGGCTTGTCA CTGTTTTTCCTCGTGGAGTGGTGTCTGGGTGATACTAGTAACCTCCTGGGTGCCCTGCTCACCCGGCAGGCAGGC TGGCAGGTTATCGTGGCTGCTTACTATGTCTGCGTTGACGTGACTCTGGTCTTCCAATACTTTTGGTACACACAC TATAGGGGACAGTATGATGGCTACGGTGCCCTTGCTCATTCGGAATATGATCGGCCTCCGGGTAGTGTCTTGGAA GGCGTCTCATTCTCCGACAACAGCTCTTCCGATCACGCCCCACGTTCTACAGAGTCCCCCTTGCCGTCAAATCCC AAAGACATGAAAGATATCAAGGAACCTGCGGTGCCGAGTTCCAACGGGCAATCTCCTTCTTACTCCAATGAGAAA CTGAGCTCCTCTAAGCGCTCAATCACCCGATCCAGCAGTGGCCCCAGCCTCCCAATTGGGTCCCCACGCACTCTG CTGCTTGCATCAATGCTGTGCGCCGTCGTGGCCAATGCTGCTCCGACAGAGCAGCAAACAACATCCGAATCCTCA CAGAAGACTCTCGAGATCCTCGGCCGGATCATCTCCTGGATGTCAACATTCCTCTACCTCGGCTCGCGGCCACCC CAACTATACAAGAACTACTGCCGGAAGAGCACATCAGGCCTCTCCCCATTACTATTCATGGCTGCCTTTTGCGGG AACCTCTTCTACTCCGCCTCCCTTCTTACCAATCCTAATGCTTGGTATGATTTCCCTGCCTATGGGGGTGGTGGC TGGGCCGATGCAGATGGCAACGACCGCCTTGAATGGGTTACCCGAGCTACTCCCTTCTTCCTTGGCGCCTTCGGT GTGCTAGCCTTTGACGGACTCATGGGCGTGCAGTTCCTCATGTATGGAACCCGGGATGACGAGTCTATCATGCAA GTTGAAGACCCCAAAGACGGACGTAGTCGTTGGACCCGCGTTCGGGGCTGGATGAGGGGCTGGATCCCTTCAGTG TCCCCTGCGCGACGGCTTCGCTCTGACGCCACAGTCTCTTCAGAGGAGAACCAATCTCTCCTGCAGAATGAGCGG GAGAGATACGGTACAGTTTGA |
Transcript | >Ani_SJS72_1|g9812.t1 ATGCCTCCTCCTCTCTTACAACAGATTCATGCAGTGCTCCCGCAACACTGTGAACCGACAACCCCATTCCTCGCG GCCGTGTCCTCCTACCTCCACATCTGCCTCCCCACACCGTTAGCCTTCGTCTCCTCCGTTCTCGGAACCCTCAGC ATCGTGTCATGGCTCTTCGCTCAGCTCCCACAAATATACAAGAATTATCAAATCCAGTCGACGGCTGGCTTGTCA CTGTTTTTCCTCGTGGAGTGGTGTCTGGGTGATACTAGTAACCTCCTGGGTGCCCTGCTCACCCGGCAGGCAGGC TGGCAGGTTATCGTGGCTGCTTACTATGTCTGCGTTGACGTGACTCTGGTCTTCCAATACTTTTGGTACACACAC TATAGGGGACAGTATGATGGCTACGGTGCCCTTGCTCATTCGGAATATGATCGGCCTCCGGGTAGTGTCTTGGAA GGCGTCTCATTCTCCGACAACAGCTCTTCCGATCACGCCCCACGTTCTACAGAGTCCCCCTTGCCGTCAAATCCC AAAGACATGAAAGATATCAAGGAACCTGCGGTGCCGAGTTCCAACGGGCAATCTCCTTCTTACTCCAATGAGAAA CTGAGCTCCTCTAAGCGCTCAATCACCCGATCCAGCAGTGGCCCCAGCCTCCCAATTGGGTCCCCACGCACTCTG CTGCTTGCATCAATGCTGTGCGCCGTCGTGGCCAATGCTGCTCCGACAGAGCAGCAAACAACATCCGAATCCTCA CAGAAGACTCTCGAGATCCTCGGCCGGATCATCTCCTGGATGTCAACATTCCTCTACCTCGGCTCGCGGCCACCC CAACTATACAAGAACTACTGCCGGAAGAGCACATCAGGCCTCTCCCCATTACTATTCATGGCTGCCTTTTGCGGG AACCTCTTCTACTCCGCCTCCCTTCTTACCAATCCTAATGCTTGGTATGATTTCCCTGCCTATGGGGGTGGTGGC TGGGCCGATGCAGATGGCAACGACCGCCTTGAATGGGTTACCCGAGCTACTCCCTTCTTCCTTGGCGCCTTCGGT GTGCTAGCCTTTGACGGACTCATGGGCGTGCAGTTCCTCATGTATGGAACCCGGGATGACGAGTCTATCATGCAA GTTGAAGACCCCAAAGACGGACGTAGTCGTTGGACCCGCGTTCGGGGCTGGATGAGGGGCTGGATCCCTTCAGTG TCCCCTGCGCGACGGCTTCGCTCTGACGCCACAGTCTCTTCAGAGGAGAACCAATCTCTCCTGCAGAATGAGCGG GAGAGATACGGTACAGTTTGA |
Gene | >Ani_SJS72_1|g9812.t1 ATGCCTCCTCCTCTCTTACAACAGATTCATGCAGTGCTCCCGCAACACTGTGAACCGACAACCCCATTCCTCGCG GCCGTGTCCTCCTACCTCCACATCTGCCTCCCCACACCGTTAGCCTTCGTCTCCTCCGTTCTCGGAACCCTCAGC ATCGTGTCATGGCTCTTCGCTCAGCTCCCACAAATATACAAGAATTATCAAATCCAGTCGACGGCTGGCTTGTCA CTGTTTTTCCTCGTGGAGTGGTGTCTGGGTGATACTAGTAACCTCCTGGGTGCCCTGCTCACCCGGCAGGCAGGC TGGCAGGTTATCGTGGCTGCTTACTATGTCTGCGTTGACGTGACTCTGGTCTTCCAATACTTTTGGTACACACAC TATAGGGGACAGTATGATGGCTACGGTGCCCTTGCTCATTCGGAATATGATCGGCCTCCGGGTAGTGTCTTGGAA GGCGTCTCATTCTCCGACAACAGCTCTTCCGATCACGCCCCACGTTCTACAGAGTCCCCCTTGCCGTCAAATCCC AAAGACATGAAAGATATCAAGGAACCTGCGGTGCCGAGTTCCAACGGGCAATCTCCTTCTTACTCCAATGAGAAA CTGAGCTCCTCTAAGCGCTCAATCACCCGATCCAGCAGTGGCCCCAGCCTCCCAATTGGGTCCCCACGCACTCTG CTGCTTGCATCAATGCTGTGCGCCGTCGTGGCCAATGCTGCTCCGACAGAGCAGCAAACAACATCCGAATCCTCA CAGAAGACTCTCGAGATCCTCGGCCGGATCATCTCCTGGATGTCAACATTCCTCTACCTCGGCTCGCGGCCACCC CAACTATACAAGAACTACTGCCGGAAGAGCACATCAGGCCTCTCCCCATTACTATTCATGGCTGCCTTTTGCGGG AACCTCTTCTACTCCGCCTCCCTTCTTACCAATCCTAATGCTTGGTATGATTTCCCTGCCTATGGGGGTGGTGGC TGGGCCGATGCAGATGGCAACGACCGCCTTGAATGGGTTACCCGAGCTACTCCCTTCTTCCTTGGCGCCTTCGGT GTGCTAGCCTTTGACGGACTCATGGGCGTGCAGTTCCTCATGTATGGAACCCGGGATGACGAGTCTATCATGCAA GTTGAAGACCCCAAAGACGGACGTAGTCGTTGGACCCGCGTTCGGGGCTGGATGAGGGGCTGGATCCCTTCAGTG TCCCCTGCGCGACGGCTTCGCTCTGACGCCACAGTCTCTTCAGAGGAGAACCAATCTCTCCTGCAGAATGAGCGG GAGAGATACGGTACAGTTTGA |