© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS72_1|g9753.t1 |
| Gene name | |
| Location | scaffold_112:41946..43528 |
| Strand | - |
| Gene length (bp) | 1582 |
| Transcript length (bp) | 1515 |
| Coding sequence length (bp) | 1515 |
| Protein length (aa) | 505 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 2.1E-43 | 68 | 455 |
| PF00083 | Sugar_tr | Sugar (and other) transporter | 4.9E-12 | 94 | 226 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0009987 | cellular process | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005215 | transporter activity | No |
| GO:0005575 | cellular_component | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0003674 | molecular_function | No |
| GO:0006810 | transport | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 62 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 61 | 83 | 22 |
| 2 | 98 | 120 | 22 |
| 3 | 127 | 149 | 22 |
| 4 | 153 | 175 | 22 |
| 5 | 187 | 209 | 22 |
| 6 | 214 | 236 | 22 |
| 7 | 296 | 318 | 22 |
| 8 | 333 | 355 | 22 |
| 9 | 376 | 395 | 19 |
| 10 | 399 | 421 | 22 |
| 11 | 434 | 456 | 22 |
| 12 | 466 | 488 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g9753.t1 MPDIEDQTEKRSSPVQSPASSTTTVAALYPETDLDKGIIGWDSQDDPSNPQNFSPKRKWMLLALMSSFTFISPLA SSMFSPAISYVAADFRVTNETLLSFSVTIFLLGYTVGPLFLAPLSEIYGRRITLSVANWFFVVWQIGCALAPNLS SLIVFRLFAGMGGVGCITLGAGVIADLFPTTQRGMATSIWAMGPLIGPVVGPIAGGFIGETIGWRWVFWILLITS GTIGASIELLNRETYAPVLIRWKTAKLARELNRPELRSAYDISQGTTPPTVSQALMQGLRRPIILICKSPIVLLL SVYMAFVYGLLYLFFTTITTVFEGVYGFSTGLAGLSYLGIGVGFFIGMAAVAMTSDRMVIKLTARNNGVFQPEMR LPTMIIFACFLPISFFWYGWSAKYEAMWIVPIIGMAPFGIGMIGIYMPIQMYVIDCYPAYAASANAALTATRSLV GSVLPLAGPKLFSSLGLGWGNSLLGFLALAFVPVPILFNRYGQTIRERWVVRLD* |
| Coding | >Ani_SJS72_1|g9753.t1 ATGCCCGATATTGAGGATCAAACCGAGAAGCGATCTTCTCCAGTCCAGTCCCCCGCCTCCAGCACCACCACCGTT GCTGCCCTCTACCCGGAAACCGATCTCGACAAGGGCATCATCGGCTGGGACAGTCAAGATGACCCCAGCAACCCG CAAAACTTTTCTCCGAAACGCAAATGGATGCTCCTCGCCCTGATGAGCTCCTTTACCTTCATCTCGCCGCTGGCG TCGAGCATGTTCTCCCCCGCCATCAGCTACGTGGCCGCCGACTTTCGCGTCACCAATGAAACCCTCCTCTCCTTC AGTGTCACCATCTTCCTCCTCGGCTATACCGTCGGCCCCCTCTTCCTCGCCCCCCTTAGCGAAATCTACGGCCGC CGCATCACTTTAAGCGTTGCAAACTGGTTCTTCGTCGTCTGGCAAATCGGCTGCGCCCTCGCCCCAAACCTTTCC AGCCTGATTGTCTTCCGTCTCTTCGCCGGCATGGGTGGCGTGGGCTGCATCACCCTCGGCGCCGGTGTCATCGCC GACCTCTTTCCCACCACCCAGCGCGGCATGGCCACCTCCATCTGGGCTATGGGCCCCTTAATCGGCCCCGTCGTT GGCCCCATTGCGGGTGGCTTCATCGGCGAAACCATCGGCTGGCGATGGGTATTCTGGATCCTGCTCATCACCAGC GGCACCATCGGCGCCAGCATCGAGCTCCTCAACCGCGAAACTTACGCCCCTGTCCTAATCCGCTGGAAAACAGCC AAGCTCGCACGCGAACTCAACCGTCCTGAGCTCCGCAGCGCCTACGACATCTCCCAAGGCACCACGCCCCCGACC GTCTCTCAAGCACTAATGCAAGGCCTCCGCCGCCCCATCATCCTCATCTGCAAGAGCCCCATCGTCCTCCTCCTC TCCGTCTACATGGCCTTCGTCTACGGCCTCCTCTACCTCTTCTTCACGACCATCACCACCGTCTTCGAAGGCGTC TACGGCTTCTCGACCGGCCTTGCAGGCCTCTCCTACCTAGGTATCGGAGTAGGCTTCTTCATCGGCATGGCCGCC GTCGCAATGACGAGTGACCGCATGGTCATCAAACTCACCGCCCGCAACAACGGCGTCTTCCAACCCGAGATGCGT CTCCCCACCATGATCATCTTCGCCTGCTTCCTTCCTATCAGCTTCTTTTGGTACGGCTGGTCCGCTAAGTACGAG GCTATGTGGATCGTGCCGATCATTGGTATGGCGCCGTTCGGCATCGGCATGATAGGCATATATATGCCGATTCAG ATGTACGTGATCGATTGTTATCCGGCGTATGCGGCGAGTGCGAATGCCGCGTTGACGGCCACGAGATCGTTGGTC GGTTCGGTGTTGCCGCTTGCTGGGCCGAAGCTCTTCAGTAGTTTGGGGCTCGGGTGGGGGAACTCGTTGCTGGGG TTTTTGGCGTTGGCGTTTGTGCCGGTGCCGATTTTGTTTAATCGCTATGGGCAGACAATTCGCGAGAGGTGGGTT GTGAGGTTGGATTAG |
| Transcript | >Ani_SJS72_1|g9753.t1 ATGCCCGATATTGAGGATCAAACCGAGAAGCGATCTTCTCCAGTCCAGTCCCCCGCCTCCAGCACCACCACCGTT GCTGCCCTCTACCCGGAAACCGATCTCGACAAGGGCATCATCGGCTGGGACAGTCAAGATGACCCCAGCAACCCG CAAAACTTTTCTCCGAAACGCAAATGGATGCTCCTCGCCCTGATGAGCTCCTTTACCTTCATCTCGCCGCTGGCG TCGAGCATGTTCTCCCCCGCCATCAGCTACGTGGCCGCCGACTTTCGCGTCACCAATGAAACCCTCCTCTCCTTC AGTGTCACCATCTTCCTCCTCGGCTATACCGTCGGCCCCCTCTTCCTCGCCCCCCTTAGCGAAATCTACGGCCGC CGCATCACTTTAAGCGTTGCAAACTGGTTCTTCGTCGTCTGGCAAATCGGCTGCGCCCTCGCCCCAAACCTTTCC AGCCTGATTGTCTTCCGTCTCTTCGCCGGCATGGGTGGCGTGGGCTGCATCACCCTCGGCGCCGGTGTCATCGCC GACCTCTTTCCCACCACCCAGCGCGGCATGGCCACCTCCATCTGGGCTATGGGCCCCTTAATCGGCCCCGTCGTT GGCCCCATTGCGGGTGGCTTCATCGGCGAAACCATCGGCTGGCGATGGGTATTCTGGATCCTGCTCATCACCAGC GGCACCATCGGCGCCAGCATCGAGCTCCTCAACCGCGAAACTTACGCCCCTGTCCTAATCCGCTGGAAAACAGCC AAGCTCGCACGCGAACTCAACCGTCCTGAGCTCCGCAGCGCCTACGACATCTCCCAAGGCACCACGCCCCCGACC GTCTCTCAAGCACTAATGCAAGGCCTCCGCCGCCCCATCATCCTCATCTGCAAGAGCCCCATCGTCCTCCTCCTC TCCGTCTACATGGCCTTCGTCTACGGCCTCCTCTACCTCTTCTTCACGACCATCACCACCGTCTTCGAAGGCGTC TACGGCTTCTCGACCGGCCTTGCAGGCCTCTCCTACCTAGGTATCGGAGTAGGCTTCTTCATCGGCATGGCCGCC GTCGCAATGACGAGTGACCGCATGGTCATCAAACTCACCGCCCGCAACAACGGCGTCTTCCAACCCGAGATGCGT CTCCCCACCATGATCATCTTCGCCTGCTTCCTTCCTATCAGCTTCTTTTGGTACGGCTGGTCCGCTAAGTACGAG GCTATGTGGATCGTGCCGATCATTGGTATGGCGCCGTTCGGCATCGGCATGATAGGCATATATATGCCGATTCAG ATGTACGTGATCGATTGTTATCCGGCGTATGCGGCGAGTGCGAATGCCGCGTTGACGGCCACGAGATCGTTGGTC GGTTCGGTGTTGCCGCTTGCTGGGCCGAAGCTCTTCAGTAGTTTGGGGCTCGGGTGGGGGAACTCGTTGCTGGGG TTTTTGGCGTTGGCGTTTGTGCCGGTGCCGATTTTGTTTAATCGCTATGGGCAGACAATTCGCGAGAGGTGGGTT GTGAGGTTGGATTAG |
| Gene | >Ani_SJS72_1|g9753.t1 ATGCCCGATATTGAGGATCAAACCGAGAAGCGATCTTCTCCAGTCCAGTCCCCCGCCTCCAGCACCACCACCGTT GCTGCCCTCTACCCGGAAACCGATCTCGACAAGGGCATCATCGGCTGGGACAGTCAAGATGACCCCAGCAACCCG CAAAACTTTTCTCCGAAACGCAAATGGATGCTCCTCGCCCTGATGAGCTCCTTTACCTTCATCTCGCCGCTGGCG TCGAGCATGTTCTCCCCCGCCATCAGCTACGTGGCCGCCGACTTTCGCGTCACCAATGAAACCCTCCTCTCCTTC AGTGTCACCATCTTCCTCCTCGGCTATACCGTATGCTTCCCACTACACCATCAATCCCTCCCCACATCTAAAGCT ATCCCCATACTAATGACCCCAGGTCGGCCCCCTCTTCCTCGCCCCCCTTAGCGAAATCTACGGCCGCCGCATCAC TTTAAGCGTTGCAAACTGGTTCTTCGTCGTCTGGCAAATCGGCTGCGCCCTCGCCCCAAACCTTTCCAGCCTGAT TGTCTTCCGTCTCTTCGCCGGCATGGGTGGCGTGGGCTGCATCACCCTCGGCGCCGGTGTCATCGCCGACCTCTT TCCCACCACCCAGCGCGGCATGGCCACCTCCATCTGGGCTATGGGCCCCTTAATCGGCCCCGTCGTTGGCCCCAT TGCGGGTGGCTTCATCGGCGAAACCATCGGCTGGCGATGGGTATTCTGGATCCTGCTCATCACCAGCGGCACCAT CGGCGCCAGCATCGAGCTCCTCAACCGCGAAACTTACGCCCCTGTCCTAATCCGCTGGAAAACAGCCAAGCTCGC ACGCGAACTCAACCGTCCTGAGCTCCGCAGCGCCTACGACATCTCCCAAGGCACCACGCCCCCGACCGTCTCTCA AGCACTAATGCAAGGCCTCCGCCGCCCCATCATCCTCATCTGCAAGAGCCCCATCGTCCTCCTCCTCTCCGTCTA CATGGCCTTCGTCTACGGCCTCCTCTACCTCTTCTTCACGACCATCACCACCGTCTTCGAAGGCGTCTACGGCTT CTCGACCGGCCTTGCAGGCCTCTCCTACCTAGGTATCGGAGTAGGCTTCTTCATCGGCATGGCCGCCGTCGCAAT GACGAGTGACCGCATGGTCATCAAACTCACCGCCCGCAACAACGGCGTCTTCCAACCCGAGATGCGTCTCCCCAC CATGATCATCTTCGCCTGCTTCCTTCCTATCAGCTTCTTTTGGTACGGCTGGTCCGCTAAGTACGAGGCTATGTG GATCGTGCCGATCATTGGTATGGCGCCGTTCGGCATCGGCATGATAGGCATATATATGCCGATTCAGATGTACGT GATCGATTGTTATCCGGCGTATGCGGCGAGTGCGAATGCCGCGTTGACGGCCACGAGATCGTTGGTCGGTTCGGT GTTGCCGCTTGCTGGGCCGAAGCTCTTCAGTAGTTTGGGGCTCGGGTGGGGGAACTCGTTGCTGGGGTTTTTGGC GTTGGCGTTTGTGCCGGTGCCGATTTTGTTTAATCGCTATGGGCAGACAATTCGCGAGAGGTGGGTTGTGAGGTT GGATTAG |