Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS72_1|g9751.t1
Gene name
Locationscaffold_112:36227..37737
Strand-
Gene length (bp)1510
Transcript length (bp)615
Coding sequence length (bp)615
Protein length (aa) 205

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00056 Ldh_1_N lactate/malate dehydrogenase, NAD binding domain 6.0E-28 4 141

GO

GO Term Description Terminal node
GO:0016491 oxidoreductase activity Yes
GO:0003824 catalytic activity No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 18 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS72_1|g9751.t1
MATIALIGLGSVGASTALSLIHRRIQGTLLLVDIKSSLRDAQVRDLADAALVYGSVTKIEAATHQEASQADVVII
TAGVNYTPGETTLQHLYHKFSILKSILNEMRPFNPNAIILVVANPVDTLTTLAQDIAGLPRKQVIGVGTCIDSLR
LQDEVSRFLGTTMEETEGYVLPQLIRVVVIPPYQLLEISRPDQEPIKVRRELLR*
Coding >Ani_SJS72_1|g9751.t1
ATGGCAACAATCGCCTTAATCGGCCTCGGCTCCGTAGGCGCCTCAACCGCCCTATCCCTAATCCACCGGCGCATC
CAAGGCACCCTCCTCCTCGTGGATATCAAATCCAGTCTCCGGGACGCACAAGTGCGCGATCTGGCTGATGCCGCG
CTCGTTTACGGCTCCGTGACCAAGATCGAAGCGGCCACGCACCAGGAAGCAAGTCAAGCAGATGTGGTGATCATT
ACCGCGGGGGTGAATTATACTCCTGGAGAAACCACCCTCCAACACCTGTACCACAAATTCAGTATCCTGAAGAGC
ATACTCAACGAGATGCGGCCGTTCAACCCTAATGCTATTATATTGGTCGTCGCTAACCCAGTTGATACTCTCACC
ACCCTCGCTCAAGACATCGCAGGCCTGCCGAGAAAGCAAGTTATCGGGGTGGGGACTTGTATCGACTCACTACGG
CTACAGGACGAGGTATCCCGCTTCCTGGGTACCACGATGGAAGAAACAGAGGGGTATGTGCTCCCCCAACTCATC
CGAGTCGTGGTCATTCCCCCATATCAGCTGCTCGAGATCAGTCGACCAGATCAAGAACCCATCAAAGTGCGCCGC
GAACTGCTCCGCTAG
Transcript >Ani_SJS72_1|g9751.t1
ATGGCAACAATCGCCTTAATCGGCCTCGGCTCCGTAGGCGCCTCAACCGCCCTATCCCTAATCCACCGGCGCATC
CAAGGCACCCTCCTCCTCGTGGATATCAAATCCAGTCTCCGGGACGCACAAGTGCGCGATCTGGCTGATGCCGCG
CTCGTTTACGGCTCCGTGACCAAGATCGAAGCGGCCACGCACCAGGAAGCAAGTCAAGCAGATGTGGTGATCATT
ACCGCGGGGGTGAATTATACTCCTGGAGAAACCACCCTCCAACACCTGTACCACAAATTCAGTATCCTGAAGAGC
ATACTCAACGAGATGCGGCCGTTCAACCCTAATGCTATTATATTGGTCGTCGCTAACCCAGTTGATACTCTCACC
ACCCTCGCTCAAGACATCGCAGGCCTGCCGAGAAAGCAAGTTATCGGGGTGGGGACTTGTATCGACTCACTACGG
CTACAGGACGAGGTATCCCGCTTCCTGGGTACCACGATGGAAGAAACAGAGGGGTATGTGCTCCCCCAACTCATC
CGAGTCGTGGTCATTCCCCCATATCAGCTGCTCGAGATCAGTCGACCAGATCAAGAACCCATCAAAGTGCGCCGC
GAACTGCTCCGCTAG
Gene >Ani_SJS72_1|g9751.t1
ATGGCAACAATCGCCTTAATCGGCCTCGGCTCCGTAGGCGCCTCAACCGCCCTATCCCTAATCCACCGGCGCATC
CAAGGCACCCTCCTCCTCGTGGATATCAAATCCAGTCTCCGGGACGCACAAGTGCGCGATCTGGCTGATGCCGCG
CTCGTTTACGGCTCCGTGACCAAGATCGAAGCGGCCACGCACCAGGAAGCAAGTCAAGCAGATGTGGTGATCATT
ACCGCGGGGGTGAATTATACTCCTGGTATTCTTCTACCTCTTGACATAATGAACTTAATGACTAAGTTTGAAGAG
GACGGGCGAAGCAAGAACAGTGGCTAATACCAATGCATAGGAGAAACCACCCTCCAACACCTGTACCACAAATTC
AGTATCCTGAAGAGCATACTCAACGAGATGCGGCCGTTCAACCCTAATGCTATTATATTGGTCGTCGCTAACCCA
GTTGATACTCTCACCACCCTCGCTCAAGACATCGCAGGCCTGCCGAGAAAGCAAGTTATCGGGGTGGGGACTTGT
ATCGACTCACTACGGCTACAGGACGAGGTATCCCGCTTCCTGGGTACCACGATGGAAGAAACAGAGGGGTATGTG
GTCGGTGTGCGGGACAGTGAGAGCCAGGTTGTCGGGTGGTCCGGGTTAATGACTCCCCAAGGGAGGGATGGGATC
GCGATTCAGAAGAGGATAGAGATAGAAAATAAGATTTGGGGCAGGTTGAAGGCCATTGTTGCTGGGAAAGGGGGC
GCGCCGTGGGGGATTGGAGCTGTGGCCGGGGGGATTGCGGTGGCGGTGCTGGAGGATAATAAGAAGACTGTCTGG
ACGGTGAGTTGTTGGAGGGAGGATTATAGGTGTTGCTGTTCGTGGCCGGTTGTGGTGGGGAGGGAGGGGGTGGTC
AGGGAGGTGAAGTTGGAGTTGGGACAGAGTGAGAAGGAGACAGTTGAAACGGGAGTTATGAGGTTGAATATTTTG
TTGGAGAGGGTTAGGGTAAATGATGCTGGAGGGTCGTAGTAGGGATCTAAGTAGCTTAGCAGTGTAATTATGCAT
TTATTGACTTTTTCTTCATAATAAGACCAAGTATGAATCCTGGTGTGAGCATAGATAAGTAACGGACTGTGAGCT
ATCGAATTCACTTGCTGTCACCACAAATCATAAAAATCAGATTTATCAGCTTCTCCCCATTCTGCTTCTGCTCAC
TCGCCACCACCTGCCTTTTCACATTCACAAAACTATCCGGAATTACCGATACCGAATCAATTCCTACTTCAACCA
AGAACCGCGCAAACTCAGGATGATAACTCGGTGCCTATCCGCAGATGCCCACCTTGCAGCCAGCCCTACGTGCCA
CGCGAGCAACCTGCGCAACCAGCGTCTTAGTCGCCTCTCCCTGCTCATAGAACAGCTCCCCCAACTCATCCGAGT
CGTGGTCATTCCCCCATATCAGCTGCTCGAGATCAGTCGACCAGATCAAGAACCCATCAAAGTGCGCCGCGAACT
GCTCCGCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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