Fungal Genomics

Agaricus bisporus var bisporus H39 Agaricus bisporus var bisporus H97 Agaricus bisporus var burnettii H119p4 Aspergillus niger CBS 112.32 Aspergillus niger CBS 113.50 Aspergillus niger CBS 115988 Aspergillus niger CBS 115989 Aspergillus niger CBS 118.52 Aspergillus niger CBS 124.48 Aspergillus niger CBS 131.52 Aspergillus niger CBS 133816 Aspergillus niger CBS 147320 Aspergillus niger CBS 147321 Aspergillus niger CBS 147322 Aspergillus niger CBS 147323 Aspergillus niger CBS 147324 Aspergillus niger CBS 147343 Aspergillus niger CBS 147344 Aspergillus niger CBS 147345 Aspergillus niger CBS 147346 Aspergillus niger CBS 147347 Aspergillus niger CBS 147352 Aspergillus niger CBS 147353 Aspergillus niger CBS 147371 Aspergillus niger CBS 147482 Aspergillus niger CBS 630.78 Aspergillus niger CBS 769.97 Niveomyces coronatus CBS 149186 Ophiocordyceps australis 1348a (Ghana) Ophiocordyceps australis map64 (Brazil) Ophiocordyceps camponoti-floridani Ophiocordyceps camponoti-rufipedis Ophiocordyceps kimflemingae Ophiocordyceps subramaniannii Penicillium roqueforti DTO002I6 Penicillium roqueforti DTO003C3 Penicillium roqueforti DTO003H1 (CBS 147308) Penicillium roqueforti DTO006G1 Penicillium roqueforti DTO006G7 Penicillium roqueforti DTO012A1 Penicillium roqueforti DTO012A2 (CBS 147309) Penicillium roqueforti DTO012A6 (CBS 147310) Penicillium roqueforti DTO012A7 Penicillium roqueforti DTO012A8 Penicillium roqueforti DTO012A9 Penicillium roqueforti DTO013E5 Penicillium roqueforti DTO013F2 Penicillium roqueforti DTO013F5 (CBS 147311) Penicillium roqueforti DTO027I6 Penicillium roqueforti DTO032C6 Penicillium roqueforti DTO039G3 Penicillium roqueforti DTO046C5 Penicillium roqueforti DTO070G2 (CBS 147317) Penicillium roqueforti DTO081F9 (CBS 147318) Penicillium roqueforti DTO101D6 (CBS 147325) Penicillium roqueforti DTO102I9 (CBS 147326) Penicillium roqueforti DTO126G2 (CBS 147330) Penicillium roqueforti DTO127F7 (CBS 147331) Penicillium roqueforti DTO127F9 (CBS 147332) Penicillium roqueforti DTO130C1 (CBS 147333) Penicillium roqueforti DTO163C3 (CBS 147337) Penicillium roqueforti DTO163F5 (CBS 147338) Penicillium roqueforti DTO163G4 (CBS 147339) Penicillium roqueforti DTO265D5 (CBS 147372) Penicillium roqueforti DTO369A1 (CBS 147354) Penicillium roqueforti DTO375B1 (CBS 147355) Penicillium roqueforti DTO377G2 (LCP 96.3914a) Penicillium roqueforti LCP96 04111 Rhodonia placenta FPRL280 Torrubiellomyces zombiae CBS 149187

General Properties

Protein ID	Ani_SJS72_1|g9737.t1
Gene name
Location	scaffold_112:11139..13426
Strand	-
Gene length (bp)	2287
Transcript length (bp)	2151
Coding sequence length (bp)	2151
Protein length (aa)	717

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF08501	Shikimate_dh_N	Shikimate dehydrogenase substrate binding domain	6.2E-21	443	523
PF01202	SKI	Shikimate kinase	2.2E-14	27	136
PF01488	Shikimate_DH	Shikimate / quinate 5-dehydrogenase	5.8E-07	566	611
PF01487	DHquinase_I	Type I 3-dehydroquinase	9.6E-07	226	419

GO

GO Term	Description	Terminal node
GO:0003855	3-dehydroquinate dehydratase activity	Yes
GO:0004764	shikimate 3-dehydrogenase (NADP+) activity	Yes
GO:0003824	catalytic activity	No
GO:0016835	carbon-oxygen lyase activity	No
GO:0016836	hydro-lyase activity	No
GO:0016491	oxidoreductase activity	No
GO:0016829	lyase activity	No
GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	No
GO:0003674	molecular_function	No
GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 11	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	20	42	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ani_SJS72_1|g9737.t1 MPCDRSVSIPCRRYDADATLLLVGFVGAGKKTLGIIASVALRRRFIDFDAVFRQEVHLSPQEYIAQNGPARYREL ELKLTRTLLDKCSTGCVITISGVGWSANRQQQVLLKKFAQNHPVVYVRRDRVDLQQFIMTTSPDKFNRIFEAGNE FFQSCSSFDFFNHTQEDKLTDYAGRPLPAYIKLKEAERVFLRFLHQVFGRAYHVLYSSDPFSPSHTYALQVPLTW LDCNPDLELLESGADAVTIVIDGGVGDNYNARFLERIAKHMATIRKHTRIPIFIEIPQSDARRGELLEMLLRLAP DAVACPVDGCEFSRLKLAKGHTKIIATYQSTSLARDQSILPEIRSLLDNSEKQGFDAFRVTIEPSFPGDLTNLTL QQRLGEVTDIPITVYHSGPLGRASICLNPILSPVVLPSLPDSATGVTLASAQQALTSCYLLPKQTFTVFGQKVQN SLSPAMHNAAYSACGLPHAYNILCSDHFSDIHKLLNSAEHGGIAVTLPYKTDVLPLLDEVSPDAQDIHAVNTVVI EHRNSSTNSPSKVLKGYNTDYLGIRDCINKHLSPANAIRHGTTALVIGAGGMARAAIYACYQLGVRQICIYNRTV SNAQKLADYYTRWAERNNTHLKIEILRSSDDAWPEGFRQPTIIVACLPAPAGGQLKSPITMEVPEQWLRSTTGGV FIDVAYGMPQTKLRIGMNERASMGWVVVDGLVVLLEQGIAQ*
Coding	>Ani_SJS72_1|g9737.t1 ATGCCATGCGACCGCTCTGTCTCCATCCCTTGTCGGCGATACGATGCGGATGCCACCCTGTTGCTCGTGGGGTTC GTCGGTGCCGGAAAGAAGACCCTAGGTATTATAGCATCTGTCGCCCTGCGGCGCAGATTTATTGATTTCGATGCT GTATTTCGTCAGGAGGTGCACTTATCTCCCCAGGAGTACATTGCACAAAATGGTCCCGCGCGATACCGGGAGCTG GAGCTGAAATTGACTCGCACTCTGCTAGATAAATGCTCCACAGGATGTGTAATTACCATCTCGGGCGTGGGATGG TCGGCAAATCGCCAGCAGCAGGTGCTTTTGAAGAAGTTTGCACAGAACCATCCCGTGGTGTATGTCAGACGCGAC AGGGTGGATCTTCAACAGTTCATCATGACCACTAGCCCTGACAAGTTCAACCGGATCTTTGAAGCGGGCAATGAG TTCTTCCAGTCATGCTCCAGCTTTGACTTTTTCAATCACACACAGGAAGACAAGTTGACAGACTATGCTGGTCGC CCACTCCCGGCGTATATCAAACTCAAGGAAGCTGAACGAGTGTTCCTAAGGTTCTTGCATCAGGTCTTCGGTCGT GCTTATCATGTGCTCTATTCTTCGGACCCGTTTTCACCGTCTCATACATATGCGCTACAGGTGCCGCTAACCTGG CTGGACTGCAATCCGGACCTGGAACTATTGGAGAGTGGCGCTGACGCGGTTACTATTGTGATTGACGGGGGAGTC GGTGATAATTACAATGCCCGATTCCTGGAAAGAATTGCCAAGCACATGGCGACGATCCGGAAGCATACTCGGATT CCAATATTCATCGAGATTCCGCAGTCAGATGCTAGACGCGGTGAGCTCTTGGAGATGCTGCTTCGACTCGCACCC GATGCTGTGGCATGTCCTGTTGACGGCTGCGAATTTAGCAGATTAAAGTTGGCTAAAGGCCACACTAAGATCATT GCCACCTATCAGTCCACCTCCTTGGCTAGGGACCAGAGTATCCTTCCTGAAATACGTTCTCTTCTGGACAATTCA GAGAAGCAAGGGTTCGATGCCTTTCGCGTTACTATAGAGCCCAGCTTCCCAGGGGATCTCACGAATCTTACTTTA CAGCAACGGCTGGGTGAGGTAACAGACATTCCCATAACCGTATACCATAGTGGGCCACTCGGACGAGCATCTATA TGTCTAAATCCCATTCTCTCGCCAGTGGTCCTCCCATCTCTTCCGGATAGTGCCACAGGGGTCACACTCGCATCG GCCCAGCAAGCACTTACATCCTGCTACCTGCTTCCGAAACAAACCTTCACCGTCTTCGGCCAAAAAGTCCAAAAC AGTCTCTCACCAGCAATGCACAATGCAGCCTACTCTGCCTGCGGTCTACCACACGCCTACAACATATTATGCAGT GATCACTTCTCCGACATCCACAAACTCCTAAACAGCGCAGAGCATGGAGGAATAGCTGTAACACTACCATACAAA ACGGACGTCCTCCCATTACTAGACGAAGTCAGCCCAGATGCCCAGGACATCCACGCCGTAAACACGGTGGTCATC GAGCACCGAAATAGCAGTACCAACAGCCCCTCCAAGGTCCTTAAAGGCTACAACACAGATTATCTCGGGATCCGC GACTGCATCAACAAACACCTCTCTCCCGCCAATGCCATCCGACACGGCACCACAGCCTTGGTAATAGGCGCAGGC GGAATGGCCCGCGCAGCCATCTATGCATGCTACCAGCTCGGCGTCCGCCAGATCTGCATCTATAACCGGACTGTT TCGAATGCGCAGAAGCTAGCTGACTATTATACCCGGTGGGCTGAGAGGAATAATACCCATCTGAAGATCGAGATT CTGCGATCGAGTGACGACGCCTGGCCAGAGGGCTTTCGTCAACCGACTATTATTGTTGCGTGTTTGCCGGCGCCG GCTGGAGGGCAGTTGAAGTCCCCTATTACGATGGAGGTGCCGGAGCAGTGGTTGAGGAGTACGACTGGGGGTGTT TTCATTGATGTGGCGTATGGAATGCCGCAGACCAAGCTGAGAATTGGTATGAATGAACGAGCGAGTATGGGCTGG GTCGTGGTTGATGGTCTGGTGGTGTTGTTGGAGCAGGGCATTGCGCAGTAG
Transcript	>Ani_SJS72_1|g9737.t1 ATGCCATGCGACCGCTCTGTCTCCATCCCTTGTCGGCGATACGATGCGGATGCCACCCTGTTGCTCGTGGGGTTC GTCGGTGCCGGAAAGAAGACCCTAGGTATTATAGCATCTGTCGCCCTGCGGCGCAGATTTATTGATTTCGATGCT GTATTTCGTCAGGAGGTGCACTTATCTCCCCAGGAGTACATTGCACAAAATGGTCCCGCGCGATACCGGGAGCTG GAGCTGAAATTGACTCGCACTCTGCTAGATAAATGCTCCACAGGATGTGTAATTACCATCTCGGGCGTGGGATGG TCGGCAAATCGCCAGCAGCAGGTGCTTTTGAAGAAGTTTGCACAGAACCATCCCGTGGTGTATGTCAGACGCGAC AGGGTGGATCTTCAACAGTTCATCATGACCACTAGCCCTGACAAGTTCAACCGGATCTTTGAAGCGGGCAATGAG TTCTTCCAGTCATGCTCCAGCTTTGACTTTTTCAATCACACACAGGAAGACAAGTTGACAGACTATGCTGGTCGC CCACTCCCGGCGTATATCAAACTCAAGGAAGCTGAACGAGTGTTCCTAAGGTTCTTGCATCAGGTCTTCGGTCGT GCTTATCATGTGCTCTATTCTTCGGACCCGTTTTCACCGTCTCATACATATGCGCTACAGGTGCCGCTAACCTGG CTGGACTGCAATCCGGACCTGGAACTATTGGAGAGTGGCGCTGACGCGGTTACTATTGTGATTGACGGGGGAGTC GGTGATAATTACAATGCCCGATTCCTGGAAAGAATTGCCAAGCACATGGCGACGATCCGGAAGCATACTCGGATT CCAATATTCATCGAGATTCCGCAGTCAGATGCTAGACGCGGTGAGCTCTTGGAGATGCTGCTTCGACTCGCACCC GATGCTGTGGCATGTCCTGTTGACGGCTGCGAATTTAGCAGATTAAAGTTGGCTAAAGGCCACACTAAGATCATT GCCACCTATCAGTCCACCTCCTTGGCTAGGGACCAGAGTATCCTTCCTGAAATACGTTCTCTTCTGGACAATTCA GAGAAGCAAGGGTTCGATGCCTTTCGCGTTACTATAGAGCCCAGCTTCCCAGGGGATCTCACGAATCTTACTTTA CAGCAACGGCTGGGTGAGGTAACAGACATTCCCATAACCGTATACCATAGTGGGCCACTCGGACGAGCATCTATA TGTCTAAATCCCATTCTCTCGCCAGTGGTCCTCCCATCTCTTCCGGATAGTGCCACAGGGGTCACACTCGCATCG GCCCAGCAAGCACTTACATCCTGCTACCTGCTTCCGAAACAAACCTTCACCGTCTTCGGCCAAAAAGTCCAAAAC AGTCTCTCACCAGCAATGCACAATGCAGCCTACTCTGCCTGCGGTCTACCACACGCCTACAACATATTATGCAGT GATCACTTCTCCGACATCCACAAACTCCTAAACAGCGCAGAGCATGGAGGAATAGCTGTAACACTACCATACAAA ACGGACGTCCTCCCATTACTAGACGAAGTCAGCCCAGATGCCCAGGACATCCACGCCGTAAACACGGTGGTCATC GAGCACCGAAATAGCAGTACCAACAGCCCCTCCAAGGTCCTTAAAGGCTACAACACAGATTATCTCGGGATCCGC GACTGCATCAACAAACACCTCTCTCCCGCCAATGCCATCCGACACGGCACCACAGCCTTGGTAATAGGCGCAGGC GGAATGGCCCGCGCAGCCATCTATGCATGCTACCAGCTCGGCGTCCGCCAGATCTGCATCTATAACCGGACTGTT TCGAATGCGCAGAAGCTAGCTGACTATTATACCCGGTGGGCTGAGAGGAATAATACCCATCTGAAGATCGAGATT CTGCGATCGAGTGACGACGCCTGGCCAGAGGGCTTTCGTCAACCGACTATTATTGTTGCGTGTTTGCCGGCGCCG GCTGGAGGGCAGTTGAAGTCCCCTATTACGATGGAGGTGCCGGAGCAGTGGTTGAGGAGTACGACTGGGGGTGTT TTCATTGATGTGGCGTATGGAATGCCGCAGACCAAGCTGAGAATTGGTATGAATGAACGAGCGAGTATGGGCTGG GTCGTGGTTGATGGTCTGGTGGTGTTGTTGGAGCAGGGCATTGCGCAGTAG
Gene	>Ani_SJS72_1|g9737.t1 ATGCCATGCGACCGCTCTGTCTCCATCCCTTGTCGGCGATACGATGCGGATGCCACCCTGTTGCTCGTGGGGTTC GTCGGTGCCGGAAAGAAGACCCTAGGTATTATAGCATCTGTCGCCCTGCGGCGCAGATTTATTGATTTCGATGCT GTATTTCGTCAGGAGGTGCACTTATCTCCCCAGGAGTACATTGCACAAAATGGTCCCGCGCGATACCGGGAGCTG GAGCTGAAATTGACTCGCACTCTGCTAGATAAATGCTCCACAGGATGTGTAATTACCATCTCGGGCGTGGGATGG TCGGCAAATCGCCAGCAGCAGGTGCTTTTGAAGAAGTTTGCACAGAACCATCCCGTGGTGTATGTCAGACGCGAC AGGGTGGATCTTCAACAGTTCATCATGACCACTAGCCCTGACAAGTTCAACCGGATCTTTGAAGCGGGCAATGAG TTCTTCCAGTCATGCTCCAGCTTTGACTTTTTCAATCACACACAGGAAGACAAGTTGACAGACTATGCTGGTCGC CCACTCCCGGCGTATATCAAACTCAAGGAAGCTGAACGAGTGTTCCTAAGGTTCTTGCATCAGGTCTTCGGTCGT GCTTATCATGTGCTCTATTCTTCGGACCCGTTTTCACCGTCTCATACATATGCGCTACAGGTGCCGCTAACCTGG CTGGACTGCAATCCGGACCTGGAACTATTGGAGAGTGGCGCTGACGCGGTTACTATTGTGATTGACGGGGGAGTC GGTGATAATTACAATGCCCGATTCCTGGAAAGAATTGCCAAGCACATGGCGACGATCCGGAAGCATACTCGGATT CCAATATTCATCGAGATTCCGCAGTCAGATGCTAGACGCGGTGAGCTCTTGGAGATGCTGCTTCGACTCGCACCC GATGCTGTGGCATGTCCTGTTGACGGCTGCGAATTTAGCAGATTAAAGTTGGCTAAAGGCCACACTAAGATCATT GCCACCTATCAGTCCACCTCCTTGGCTAGGGACCAGAGTATCCTTCCTGAAATACGTTCTCTTCTGGACAATTCA GAGAAGCAAGGGTTCGATGCCTTTCGCGTTACTATAGAGCCCAGCTTCCCAGGGGATCTCACGAATCTTACTTTA CAGCAACGGCTGGGTGAGGTAACAGACATTCCCATAACCGTATACCATAGTGGGCCACTCGGACGAGCATCTATA TGTCTAAATCCCATTCTCTCGCCAGTGGTCCTCCCATCTCTTCCGGATAGTGCCACAGGGGTCACACTCGCATCG GCCCAGCAAGCACTTACATCCTGCTACCTGCTTCCGAAACAAACCTTCACCGTCTTCGGCCAAAAAGTCCAAAAC AGTCTCTCACCAGCAATGCACAATGCAGCCTACTCTGCCTGCGGTCTACCACACGCCTACAACATATTATGCAGT GATCACTTCTCCGACATCCACAAACTCCTAAACAGCGCAGAGCATGGAGGAATAGCTGTAACACTACCATACAAA ACGGACGTCCTCCCATTACTAGACGAAGTCAGCCCAGATGCCCAGGACATCCACGCCGTAAACACGGTGGTCATC GAGCACCGAAATAGCAGTACCAACAGCCCCTCCAAGGTCCTTAAAGGCTACAACACAGATTATCTCGGGATCCGC GACTGCATCAACAAACACCTCTCTCCCGCCAATGCCATCCGACACGGCACCACAGCCTTGGTAATAGGCGCAGGC GGAATGGCCCGCGCAGCCATCTATGCATGCTACCAGCTCGGCGTCCGCCAGATCTGCATCTATAACCGGACTGTT TCGAATGCGCAGAAGCTAGCTGACTATTATACCCGGTGGGCTGAGAGGAATAATACCCATCTGAAGATCGAGATT CTGCGATCGAGTGACGACGCCTGGCCAGAGGGCTTTCGTCAACCGACTATTATTGTTGCGTGTTTGCCGGCGCCG GCTGGAGGGCAGTTGAAGTCCCCTATTACGATGGAGGTGCCGGAGCAGTGGTTGAGGAGTACGACTGGGGGTGTT TTCATTGATGTATGTGTTCTCAAATACCCTGATTTTTTAATGAGAGGTGCTAACTGGACAGGTGGCGTATGGAAT GCCGCAGACCAAGCTGAGAATTGGTATGAATGAACGAGCGAGTATGGGCTGGGTCGTGGTTGATGGTCTGGTGGT GTTGTTGGAGCAGGGCATTGCGCAGTATGAGCTGTTTACAAGGAGGCCGGCGCCGGTGCATGTGATGAGGGGGGT ATTGAGGGAGTATACTAATGCAACACTTAGCAGGTAG