Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ani_SJS72_1\|g9660.t1
Gene name
Location	scaffold_109:14802..15417
Strand	+
Gene length (bp)	615
Transcript length (bp)	615
Coding sequence length (bp)	615
Protein length (aa)	205

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF03935	SKN1_KRE6_Sbg1	Beta-glucan synthesis-associated protein SKN1/KRE6/Sbg1	3.1E-10	150	204

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 61	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	181	203	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ani_SJS72_1\|g9660.t1 MSEDPILRETPHIRVNSGQHDPFADSDDPYVSVPPQQMGRTLTPAMVQSTSEATFPTTWGSPTPQESTELLIPPR PYRFREELRSPELSIRSSRRTSWSSEAVSYDARAYLYSRFEDSRAPSRAESEGDDVNTQTVTEKYNIMPTEGLLL FPEDVEKDDYMHNPDPNDKDIVCDVWNKRGLINLGGLLLMTVGFVVLFVAYPVM*
Coding	>Ani_SJS72_1\|g9660.t1 ATGTCCGAAGACCCGATCTTGCGCGAGACACCTCACATCCGTGTCAATTCGGGCCAACATGACCCATTCGCCGAC TCCGATGATCCCTACGTCTCAGTACCGCCCCAGCAGATGGGGCGGACGTTGACCCCCGCCATGGTGCAGTCGACC TCTGAAGCCACGTTCCCGACGACATGGGGCTCGCCCACTCCCCAGGAATCAACTGAGCTCTTAATACCCCCGCGG CCCTACCGCTTCAGAGAGGAACTGCGGTCTCCCGAATTGTCGATTCGGTCCTCGCGACGGACGAGCTGGAGCTCA GAGGCGGTCAGCTATGATGCCAGAGCTTACCTGTACAGTCGATTTGAAGATTCGCGGGCACCGTCGCGTGCAGAA AGTGAAGGGGATGACGTGAACACCCAAACAGTGACGGAAAAGTACAACATAATGCCAACAGAAGGATTATTATTG TTCCCGGAGGATGTTGAGAAGGATGACTATATGCACAATCCCGATCCAAATGACAAGGACATAGTGTGCGATGTA TGGAACAAACGGGGTCTGATTAATCTGGGTGGGCTGCTCCTCATGACAGTGGGCTTTGTAGTGCTCTTTGTTGCG TACCCAGTGATGTGA
Transcript	>Ani_SJS72_1\|g9660.t1 ATGTCCGAAGACCCGATCTTGCGCGAGACACCTCACATCCGTGTCAATTCGGGCCAACATGACCCATTCGCCGAC TCCGATGATCCCTACGTCTCAGTACCGCCCCAGCAGATGGGGCGGACGTTGACCCCCGCCATGGTGCAGTCGACC TCTGAAGCCACGTTCCCGACGACATGGGGCTCGCCCACTCCCCAGGAATCAACTGAGCTCTTAATACCCCCGCGG CCCTACCGCTTCAGAGAGGAACTGCGGTCTCCCGAATTGTCGATTCGGTCCTCGCGACGGACGAGCTGGAGCTCA GAGGCGGTCAGCTATGATGCCAGAGCTTACCTGTACAGTCGATTTGAAGATTCGCGGGCACCGTCGCGTGCAGAA AGTGAAGGGGATGACGTGAACACCCAAACAGTGACGGAAAAGTACAACATAATGCCAACAGAAGGATTATTATTG TTCCCGGAGGATGTTGAGAAGGATGACTATATGCACAATCCCGATCCAAATGACAAGGACATAGTGTGCGATGTA TGGAACAAACGGGGTCTGATTAATCTGGGTGGGCTGCTCCTCATGACAGTGGGCTTTGTAGTGCTCTTTGTTGCG TACCCAGTGATGTGA
Gene	>Ani_SJS72_1\|g9660.t1 ATGTCCGAAGACCCGATCTTGCGCGAGACACCTCACATCCGTGTCAATTCGGGCCAACATGACCCATTCGCCGAC TCCGATGATCCCTACGTCTCAGTACCGCCCCAGCAGATGGGGCGGACGTTGACCCCCGCCATGGTGCAGTCGACC TCTGAAGCCACGTTCCCGACGACATGGGGCTCGCCCACTCCCCAGGAATCAACTGAGCTCTTAATACCCCCGCGG CCCTACCGCTTCAGAGAGGAACTGCGGTCTCCCGAATTGTCGATTCGGTCCTCGCGACGGACGAGCTGGAGCTCA GAGGCGGTCAGCTATGATGCCAGAGCTTACCTGTACAGTCGATTTGAAGATTCGCGGGCACCGTCGCGTGCAGAA AGTGAAGGGGATGACGTGAACACCCAAACAGTGACGGAAAAGTACAACATAATGCCAACAGAAGGATTATTATTG TTCCCGGAGGATGTTGAGAAGGATGACTATATGCACAATCCCGATCCAAATGACAAGGACATAGTGTGCGATGTA TGGAACAAACGGGGTCTGATTAATCTGGGTGGGCTGCTCCTCATGACAGTGGGCTTTGTAGTGCTCTTTGTTGCG TACCCAGTGATGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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