© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g9652.t1 |
| Gene name | |
| Location | scaffold_108:83900..85227 |
| Strand | + |
| Gene length (bp) | 1327 |
| Transcript length (bp) | 1071 |
| Coding sequence length (bp) | 1071 |
| Protein length (aa) | 357 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 29 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 19 | 41 | 22 |
| 2 | 54 | 76 | 22 |
| 3 | 96 | 118 | 22 |
| 4 | 130 | 152 | 22 |
| 5 | 178 | 200 | 22 |
| 6 | 213 | 235 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g9652.t1 MGGSIEQQDDVPTSSMTIAVRIIVLVLAIPTTLVCVLRLYLRKFVLNNFGLDDWLVLVALIGVDLFSALAYIITY YGLGRPMKYVPTDHLVVFLTLEYASQCAYLVIAATVKASLLIFIMRLFPTRFVHIAGKALLGIIAAFTLSGTLAL VFQCRPVQAAYDKAITNSSCYPTETSYAILMMQGVIMFVLDVSILVLPIWPIWQLQMPIRRRILVLGLLCIGFTA CVAALVRFSTLKFANDTTNFTYSASTSLIWMEIEFNLGLMSGSLPSLRKLFKLGSLFPTSRSTKTQQSYTSDFEL HRHSWTITGITKKTEIQRAYERSESQEFIAPIYGQGELTTTTKAYADGETSSASNV* |
| Coding | >Ani_SJS72_1|g9652.t1 ATGGGTGGGTCTATCGAGCAACAGGACGATGTGCCAACATCGTCCATGACCATCGCGGTGCGGATTATTGTGTTG GTGCTGGCGATTCCGACAACCTTGGTGTGTGTGCTTCGACTGTATCTGCGCAAGTTCGTTCTTAATAACTTCGGA CTTGATGACTGGTTGGTGCTGGTTGCTCTTATCGGAGTGGATCTGTTCTCTGCCCTGGCGTATATCATCACATAC TATGGATTGGGCCGACCTATGAAATATGTTCCTACAGATCATCTGGTTGTGTTTCTCACGCTCGAATACGCCTCA CAATGCGCCTACCTAGTCATCGCAGCGACTGTAAAAGCGAGCCTGCTCATCTTCATCATGCGTCTGTTCCCGACT CGTTTCGTTCACATTGCCGGGAAAGCTCTTCTTGGTATCATCGCGGCCTTCACCCTCTCGGGGACCCTCGCGCTG GTCTTTCAGTGTCGCCCAGTCCAAGCGGCCTACGACAAGGCTATCACCAATTCTAGCTGCTATCCCACTGAGACC TCGTACGCAATTCTTATGATGCAAGGTGTCATCATGTTCGTGCTAGATGTATCGATCCTAGTACTTCCGATATGG CCTATCTGGCAGTTGCAGATGCCGATAAGGAGGCGAATACTTGTGCTGGGGCTGCTCTGCATTGGCTTCACCGCA TGTGTTGCTGCCCTCGTGCGCTTCTCGACACTAAAATTTGCCAATGATACGACGAACTTCACCTATTCAGCTTCC ACGTCCCTCATTTGGATGGAGATTGAATTCAATCTCGGCCTTATGTCAGGGTCTCTCCCCTCTTTGCGAAAACTT TTCAAGCTTGGCTCTCTTTTCCCCACGAGCCGCTCAACGAAGACACAGCAAAGTTATACATCGGACTTCGAGCTG CACCGGCACAGTTGGACAATAACTGGGATTACAAAGAAGACAGAAATCCAGAGGGCCTACGAGAGAAGTGAGAGC CAGGAGTTCATTGCCCCAATATATGGGCAGGGAGAATTGACCACAACTACCAAAGCCTATGCGGATGGGGAGACA AGCTCTGCCAGTAATGTTTGA |
| Transcript | >Ani_SJS72_1|g9652.t1 ATGGGTGGGTCTATCGAGCAACAGGACGATGTGCCAACATCGTCCATGACCATCGCGGTGCGGATTATTGTGTTG GTGCTGGCGATTCCGACAACCTTGGTGTGTGTGCTTCGACTGTATCTGCGCAAGTTCGTTCTTAATAACTTCGGA CTTGATGACTGGTTGGTGCTGGTTGCTCTTATCGGAGTGGATCTGTTCTCTGCCCTGGCGTATATCATCACATAC TATGGATTGGGCCGACCTATGAAATATGTTCCTACAGATCATCTGGTTGTGTTTCTCACGCTCGAATACGCCTCA CAATGCGCCTACCTAGTCATCGCAGCGACTGTAAAAGCGAGCCTGCTCATCTTCATCATGCGTCTGTTCCCGACT CGTTTCGTTCACATTGCCGGGAAAGCTCTTCTTGGTATCATCGCGGCCTTCACCCTCTCGGGGACCCTCGCGCTG GTCTTTCAGTGTCGCCCAGTCCAAGCGGCCTACGACAAGGCTATCACCAATTCTAGCTGCTATCCCACTGAGACC TCGTACGCAATTCTTATGATGCAAGGTGTCATCATGTTCGTGCTAGATGTATCGATCCTAGTACTTCCGATATGG CCTATCTGGCAGTTGCAGATGCCGATAAGGAGGCGAATACTTGTGCTGGGGCTGCTCTGCATTGGCTTCACCGCA TGTGTTGCTGCCCTCGTGCGCTTCTCGACACTAAAATTTGCCAATGATACGACGAACTTCACCTATTCAGCTTCC ACGTCCCTCATTTGGATGGAGATTGAATTCAATCTCGGCCTTATGTCAGGGTCTCTCCCCTCTTTGCGAAAACTT TTCAAGCTTGGCTCTCTTTTCCCCACGAGCCGCTCAACGAAGACACAGCAAAGTTATACATCGGACTTCGAGCTG CACCGGCACAGTTGGACAATAACTGGGATTACAAAGAAGACAGAAATCCAGAGGGCCTACGAGAGAAGTGAGAGC CAGGAGTTCATTGCCCCAATATATGGGCAGGGAGAATTGACCACAACTACCAAAGCCTATGCGGATGGGGAGACA AGCTCTGCCAGTAATGTTTGA |
| Gene | >Ani_SJS72_1|g9652.t1 ATGGGTGGGTCTATCGAGCAACAGGACGATGTGCCAACATCGTCCATGACCATCGCGGTGCGGATTATTGTGTTG GTGCTGGCGATTCCGACAACCTTGGTGTGTGTGCTTCGAGTATGTTTCCTCAACATTCCTGCAAGCAATCTGGAG GCCAAAATGACTGAGCTGTTGTAGCTGTATCTGCGCAAGTTCGTTCTTAATAACTTCGGACTTGATGACTGGTTG GTGCTGGTTGCTCTTGTGAGTTACGCAGCCGGTAATATTTCCCCGCGCATGATAACTGACTGACTAGATCGGAGT GGATCTGTTCTCTGCCCTGGCGTATATCATCACATACTATGGATTGGGCCGACCTATGAAATATGTTCCTACAGA TCATCTGGTTGTGTTTCTCACGGTTCGTACATCGAGGCCGAGAGCTTTTACCCAAACTGATCTTTGCAGCTCGAA TACGCCTCACAATGCGCCTACCTAGTCATCGCAGCGACTGTAAAAGCGAGCCTGCTCATCTTCATCATGCGTCTG TTCCCGACTCGTTTCGTTCACATTGCCGGGAAAGCTCTTCTTGGTATCATCGCGGCCTTCACCCTCTCGGGGACC CTCGCGCTGGTCTTTCAGTGTCGCCCAGTCCAAGCGGCCTACGACAAGGCTATCACCAATTCTAGCTGCTATCCC ACTGAGACCTCGTACGCAATTCTTATGATGCAAGGTGTCATCATGTTCGTGCTAGATGTATCGATCCTAGTACTT CCGATATGGCCTATCTGGCAGTTGCAGATGCCGATAAGGAGGCGAATACTTGTGCTGGGGCTGCTCTGCATTGGT AAGCTCTCGAGGGAATTCAATAGTCCATTAATTAAGTATTGTCCAGGCTTCACCGCATGTGTTGCTGCCCTCGTG CGCTTCTCGACACTAAAATTTGCCAATGATACGACGAACTTCACCTGTATAGTTCCTTCCAATGTCGGCGGGAGA TAAAAACTGACTTCCCTTAGATTCAGCTTCCACGTCCCTCATTTGGATGGAGATTGAATTCAATCTCGGCCTTAT GTCAGGGTCTCTCCCCTCTTTGCGAAAACTTTTCAAGCTTGGCTCTCTTTTCCCCACGAGCCGCTCAACGAAGAC ACAGCAAAGTTATACATCGGACTTCGAGCTGCACCGGCACAGTTGGACAATAACTGGGATTACAAAGAAGACAGA AATCCAGAGGGCCTACGAGAGAAGTGAGAGCCAGGAGTTCATTGCCCCAATATATGGGCAGGGAGAATTGACCAC AACTACCAAAGCCTATGCGGATGGGGAGACAAGCTCTGCCAGTAATGTTTGA |