© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g9545.t1 |
| Gene name | |
| Location | scaffold_105:57468..59508 |
| Strand | - |
| Gene length (bp) | 2040 |
| Transcript length (bp) | 1983 |
| Coding sequence length (bp) | 1983 |
| Protein length (aa) | 661 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00474 | SSF | Sodium:solute symporter family | 2.0E-22 | 50 | 466 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016020 | membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0009987 | cellular process | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005215 | transporter activity | No |
| GO:0005575 | cellular_component | No |
| GO:0003674 | molecular_function | No |
| GO:0006810 | transport | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 51 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 15 | 34 | 19 |
| 2 | 55 | 77 | 22 |
| 3 | 92 | 111 | 19 |
| 4 | 138 | 160 | 22 |
| 5 | 170 | 192 | 22 |
| 6 | 199 | 221 | 22 |
| 7 | 248 | 270 | 22 |
| 8 | 291 | 313 | 22 |
| 9 | 358 | 380 | 22 |
| 10 | 401 | 423 | 22 |
| 11 | 428 | 450 | 22 |
| 12 | 457 | 476 | 19 |
| 13 | 496 | 518 | 22 |
| 14 | 596 | 618 | 22 |
| 15 | 628 | 650 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g9545.t1 MSHELRVLPPGAGYGIVIGIGGIFALFMLGISWLQNRYTQFSTHRAEEFNTASRSVKPGLISAGIVSSWTWSATL LTSSTFAYSYGVCGPMWYGAIGTLQILLFALIAVKIKANAPGAHTMPEIVLARHGKVAHLTYLYNGLATNMLVSA CLVLGGAQVVAALTGMNVYAANFLIPAVVAAYVIVGGLRATFIADYTHTVILFIAILVFGFSVSATSDLIGSPGK LYDLLQEASRNMPIDRNTDGSYLAFRSVGGLIFAVDIFVSGFSTVWLDQAYWQRAIASRPESSVKAYMLGGVAWY GIPFGFATAMGLGCAALTNNPAFPTYPNPLSASQVDAGLSAPATAITLLGKGGAVLMLILLFMAVTSSTSAELIA VSSLLTFDVYKTYIRPNTDSATLVRVSHWGIVIYAIILAAFCSILNAAGVSLTWLLTVLGVIVGGAAIPVGLILL WDRMSTVAAIAAPWIGFGLGIIVWFITSWKRSGGISVATTGDATNAVAGNLASFGVGTISAVLLSLIFPGKRRHD TSATNSITGVPVEPEKTSTEASAKKDNDTEIVTTMATPTDPITQPKNDIIEYLETETIEPMDPALVKKAERFAWT ANAIFIAIAVILVPFTLFGTRYVYNREFFTGWVVVSFIWVWASVLICVIYPVVSGHAFEK* |
| Coding | >Ani_SJS72_1|g9545.t1 ATGTCTCACGAGCTTCGAGTCCTGCCCCCAGGTGCGGGCTATGGAATCGTCATCGGCATCGGTGGCATCTTCGCC CTATTCATGCTCGGTATCTCCTGGCTACAGAATCGCTATACGCAGTTCTCCACCCATCGCGCCGAAGAATTCAAC ACCGCCTCACGATCCGTCAAGCCGGGCTTGATCTCCGCTGGCATTGTCTCCTCCTGGACATGGTCAGCTACACTC CTAACCAGTTCGACTTTTGCATATTCCTATGGTGTCTGCGGACCCATGTGGTACGGTGCTATCGGCACCCTGCAG ATCCTTCTGTTTGCCCTGATTGCGGTCAAAATCAAAGCCAATGCACCGGGCGCACACACCATGCCGGAGATTGTC CTCGCTCGACACGGCAAGGTTGCTCATCTCACGTACTTGTACAATGGTCTGGCTACGAATATGCTGGTTAGTGCG TGTTTGGTGCTAGGTGGCGCGCAGGTGGTGGCGGCACTCACGGGGATGAATGTGTATGCTGCCAATTTCCTTATT CCTGCCGTAGTCGCGGCGTATGTTATCGTCGGTGGATTGCGCGCGACTTTCATCGCGGATTATACTCATACCGTT ATTCTGTTTATCGCGATATTGGTGTTTGGGTTTTCGGTCTCGGCTACCAGTGACCTCATTGGAAGCCCTGGAAAG TTGTACGATTTGCTGCAGGAGGCGTCGCGGAATATGCCGATTGATCGGAATACTGATGGGTCGTATCTTGCGTTT CGGTCCGTTGGTGGTCTGATCTTCGCGGTTGACATATTTGTCTCTGGGTTCAGTACTGTCTGGCTCGACCAAGCC TATTGGCAGCGAGCAATTGCGTCGCGACCTGAATCTTCCGTGAAGGCATACATGCTAGGAGGTGTTGCATGGTAT GGCATTCCGTTCGGCTTTGCTACGGCCATGGGTCTCGGTTGTGCGGCTCTTACCAACAACCCAGCCTTTCCCACA TACCCCAACCCATTATCAGCTTCTCAAGTCGACGCCGGACTTTCCGCCCCAGCAACCGCAATCACCCTCCTAGGG AAAGGCGGCGCCGTGCTCATGCTCATCCTCCTGTTCATGGCAGTGACTAGTTCCACATCCGCTGAACTCATCGCT GTCTCCTCCCTACTCACCTTTGATGTGTACAAAACCTACATCCGCCCGAACACCGACTCTGCGACACTCGTGCGC GTCAGCCACTGGGGCATTGTCATCTATGCCATTATCCTCGCCGCGTTCTGCAGTATCCTCAATGCTGCAGGCGTC AGCCTCACCTGGTTACTAACAGTGCTGGGAGTCATCGTCGGCGGAGCAGCAATTCCCGTGGGACTTATTCTGCTC TGGGACCGCATGTCCACTGTTGCGGCTATTGCAGCTCCATGGATTGGATTTGGCTTGGGTATCATCGTCTGGTTC ATCACTTCGTGGAAGCGATCGGGCGGCATCAGTGTTGCGACGACGGGCGATGCCACAAATGCCGTAGCTGGAAAC TTGGCCTCGTTTGGGGTGGGCACTATTTCCGCTGTGCTTTTGAGCTTGATATTTCCAGGAAAGCGCAGACACGAC ACGTCGGCAACGAATAGTATCACAGGAGTCCCTGTCGAACCAGAGAAGACCTCGACAGAGGCATCAGCCAAGAAG GATAATGATACCGAAATAGTCACAACAATGGCAACCCCGACTGACCCCATCACGCAGCCGAAGAACGATATAATT GAGTACCTCGAAACCGAGACCATTGAGCCCATGGATCCTGCTCTGGTTAAGAAGGCGGAGCGATTTGCTTGGACA GCGAATGCTATTTTTATTGCGATTGCAGTGATACTTGTTCCTTTCACTTTGTTCGGGACGAGGTATGTGTACAAC AGAGAGTTCTTTACGGGGTGGGTTGTCGTCTCCTTTATTTGGGTCTGGGCGAGTGTGCTCATCTGTGTGATATAT CCGGTGGTAAGTGGTCACGCTTTCGAGAAATGA |
| Transcript | >Ani_SJS72_1|g9545.t1 ATGTCTCACGAGCTTCGAGTCCTGCCCCCAGGTGCGGGCTATGGAATCGTCATCGGCATCGGTGGCATCTTCGCC CTATTCATGCTCGGTATCTCCTGGCTACAGAATCGCTATACGCAGTTCTCCACCCATCGCGCCGAAGAATTCAAC ACCGCCTCACGATCCGTCAAGCCGGGCTTGATCTCCGCTGGCATTGTCTCCTCCTGGACATGGTCAGCTACACTC CTAACCAGTTCGACTTTTGCATATTCCTATGGTGTCTGCGGACCCATGTGGTACGGTGCTATCGGCACCCTGCAG ATCCTTCTGTTTGCCCTGATTGCGGTCAAAATCAAAGCCAATGCACCGGGCGCACACACCATGCCGGAGATTGTC CTCGCTCGACACGGCAAGGTTGCTCATCTCACGTACTTGTACAATGGTCTGGCTACGAATATGCTGGTTAGTGCG TGTTTGGTGCTAGGTGGCGCGCAGGTGGTGGCGGCACTCACGGGGATGAATGTGTATGCTGCCAATTTCCTTATT CCTGCCGTAGTCGCGGCGTATGTTATCGTCGGTGGATTGCGCGCGACTTTCATCGCGGATTATACTCATACCGTT ATTCTGTTTATCGCGATATTGGTGTTTGGGTTTTCGGTCTCGGCTACCAGTGACCTCATTGGAAGCCCTGGAAAG TTGTACGATTTGCTGCAGGAGGCGTCGCGGAATATGCCGATTGATCGGAATACTGATGGGTCGTATCTTGCGTTT CGGTCCGTTGGTGGTCTGATCTTCGCGGTTGACATATTTGTCTCTGGGTTCAGTACTGTCTGGCTCGACCAAGCC TATTGGCAGCGAGCAATTGCGTCGCGACCTGAATCTTCCGTGAAGGCATACATGCTAGGAGGTGTTGCATGGTAT GGCATTCCGTTCGGCTTTGCTACGGCCATGGGTCTCGGTTGTGCGGCTCTTACCAACAACCCAGCCTTTCCCACA TACCCCAACCCATTATCAGCTTCTCAAGTCGACGCCGGACTTTCCGCCCCAGCAACCGCAATCACCCTCCTAGGG AAAGGCGGCGCCGTGCTCATGCTCATCCTCCTGTTCATGGCAGTGACTAGTTCCACATCCGCTGAACTCATCGCT GTCTCCTCCCTACTCACCTTTGATGTGTACAAAACCTACATCCGCCCGAACACCGACTCTGCGACACTCGTGCGC GTCAGCCACTGGGGCATTGTCATCTATGCCATTATCCTCGCCGCGTTCTGCAGTATCCTCAATGCTGCAGGCGTC AGCCTCACCTGGTTACTAACAGTGCTGGGAGTCATCGTCGGCGGAGCAGCAATTCCCGTGGGACTTATTCTGCTC TGGGACCGCATGTCCACTGTTGCGGCTATTGCAGCTCCATGGATTGGATTTGGCTTGGGTATCATCGTCTGGTTC ATCACTTCGTGGAAGCGATCGGGCGGCATCAGTGTTGCGACGACGGGCGATGCCACAAATGCCGTAGCTGGAAAC TTGGCCTCGTTTGGGGTGGGCACTATTTCCGCTGTGCTTTTGAGCTTGATATTTCCAGGAAAGCGCAGACACGAC ACGTCGGCAACGAATAGTATCACAGGAGTCCCTGTCGAACCAGAGAAGACCTCGACAGAGGCATCAGCCAAGAAG GATAATGATACCGAAATAGTCACAACAATGGCAACCCCGACTGACCCCATCACGCAGCCGAAGAACGATATAATT GAGTACCTCGAAACCGAGACCATTGAGCCCATGGATCCTGCTCTGGTTAAGAAGGCGGAGCGATTTGCTTGGACA GCGAATGCTATTTTTATTGCGATTGCAGTGATACTTGTTCCTTTCACTTTGTTCGGGACGAGGTATGTGTACAAC AGAGAGTTCTTTACGGGGTGGGTTGTCGTCTCCTTTATTTGGGTCTGGGCGAGTGTGCTCATCTGTGTGATATAT CCGGTGGTAAGTGGTCACGCTTTCGAGAAATGA |
| Gene | >Ani_SJS72_1|g9545.t1 ATGTCTCACGAGCTTCGAGTCCTGCCCCCAGGTGCGGGCTATGGAATCGTCATCGGCATCGGTGGCATCTTCGCC CTATTCATGCTCGGTATCTCCTGGCTACAGAATCGCTATACGCAGTTCTCCACCCATCGCGCCGAAGAATTCAAC ACCGCCTCACGATCCGTCAAGCCGGGCTTGATCTCCGCTGGCATTGTCTCCTCCTGGACATGGTCAGCTACACTC CTAACCAGTTCGACTTTTGCATATTCCTATGGTGTCTGCGGACCCATGTGGTACGGTGCTATCGGCACCCTGCAG ATCCTTCTGTTTGCCCTGATTGCGGTCAAAATCAAAGCCAATGCACCGGGCGCACACACCATGCCGGAGATTGTC CTCGCTCGACACGGCAAGGTTGCTCATCTCACGTACTTGTACAATGGTCTGGCTACGAATATGCTGGTTAGTGCG TGTTTGGTGCTAGGTGGCGCGCAGGTGGTGGCGGCACTCACGGGGATGAATGTGTATGCTGCCAATTTCCTTATT CCTGCCGTAGTCGCGGCGTATGTTATCGTCGGTGGATTGCGCGCGACTTTCATCGCGGATTATACTCATACCGTT ATTCTGTTTATCGCGATATTGGTGTTTGGGTTTTCGGTCTCGGCTACCAGTGACCTCATTGGAAGCCCTGGAAAG TTGTACGATTTGCTGCAGGAGGCGTCGCGGAATATGCCGATTGATCGGAATACTGATGGGTCGTATCTTGCGTTT CGGTCCGTTGGTGGTCTGATCTTCGCGGTTGACATATTTGTCTCTGGGTTCAGTACTGTCTGGCTCGACCAAGCC TATTGGCAGCGAGCAATTGCGTCGCGACCTGAATCTTCCGTGAAGGCATACATGCTAGGAGGTGTTGCATGGTAT GGTGAGTACCAGGGTCTTCAAGAATTCCATGTCTTTTACTGGATACTGATAACCTTAGGCATTCCGTTCGGCTTT GCTACGGCCATGGGTCTCGGTTGTGCGGCTCTTACCAACAACCCAGCCTTTCCCACATACCCCAACCCATTATCA GCTTCTCAAGTCGACGCCGGACTTTCCGCCCCAGCAACCGCAATCACCCTCCTAGGGAAAGGCGGCGCCGTGCTC ATGCTCATCCTCCTGTTCATGGCAGTGACTAGTTCCACATCCGCTGAACTCATCGCTGTCTCCTCCCTACTCACC TTTGATGTGTACAAAACCTACATCCGCCCGAACACCGACTCTGCGACACTCGTGCGCGTCAGCCACTGGGGCATT GTCATCTATGCCATTATCCTCGCCGCGTTCTGCAGTATCCTCAATGCTGCAGGCGTCAGCCTCACCTGGTTACTA ACAGTGCTGGGAGTCATCGTCGGCGGAGCAGCAATTCCCGTGGGACTTATTCTGCTCTGGGACCGCATGTCCACT GTTGCGGCTATTGCAGCTCCATGGATTGGATTTGGCTTGGGTATCATCGTCTGGTTCATCACTTCGTGGAAGCGA TCGGGCGGCATCAGTGTTGCGACGACGGGCGATGCCACAAATGCCGTAGCTGGAAACTTGGCCTCGTTTGGGGTG GGCACTATTTCCGCTGTGCTTTTGAGCTTGATATTTCCAGGAAAGCGCAGACACGACACGTCGGCAACGAATAGT ATCACAGGAGTCCCTGTCGAACCAGAGAAGACCTCGACAGAGGCATCAGCCAAGAAGGATAATGATACCGAAATA GTCACAACAATGGCAACCCCGACTGACCCCATCACGCAGCCGAAGAACGATATAATTGAGTACCTCGAAACCGAG ACCATTGAGCCCATGGATCCTGCTCTGGTTAAGAAGGCGGAGCGATTTGCTTGGACAGCGAATGCTATTTTTATT GCGATTGCAGTGATACTTGTTCCTTTCACTTTGTTCGGGACGAGGTATGTGTACAACAGAGAGTTCTTTACGGGG TGGGTTGTCGTCTCCTTTATTTGGGTCTGGGCGAGTGTGCTCATCTGTGTGATATATCCGGTGGTAAGTGGTCAC GCTTTCGAGAAATGA |