Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS72_1|g9484.t1
Gene name
Locationscaffold_103:86545..87762
Strand+
Gene length (bp)1217
Transcript length (bp)1149
Coding sequence length (bp)1149
Protein length (aa) 383

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00544 Pectate_lyase_4 Pectate lyase 2.2E-10 123 297

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
Yes 1 - 22 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS72_1|g9484.t1
MRPDLLSTFVTVMAFAHHAEAAQSSIVSGSAPGFAAGVTGGGDATPVYPTTIDELKEYLTSSSPQNIVIEGTFDF
VGSEGTKTYQACNIYDCTPDNGGQAILNTLGGCGDTSTYDVTIDVAGYQGINVASDKTLVGKGTGAVLNGKGLRF
VGVSNIIIQNIEITNLNPKYVWGGDALTFSDTNQIWIDHVTTSSLGRQHYSFGQESDNAITISNSFINGKTDYSA
TCDGHTYWGLELVGSSDQITFYKNYVYYTSGRSPALSGNTLFHAVNSVWADNSGHAIEGTDNGMGLFEGNVFNNV
PTIVQSGFVGQLFSSESANLSQCETSLGRDCVTNAYTSSGSFSYDDDGFFVDFENLPIVSAASASSIASTVPSDA
GNTLSST*
Coding >Ani_SJS72_1|g9484.t1
ATGAGGCCCGATCTTCTATCTACCTTCGTGACCGTGATGGCCTTCGCGCATCATGCCGAAGCAGCGCAGTCTTCT
ATTGTCTCGGGGAGTGCTCCCGGCTTCGCAGCGGGCGTGACGGGAGGAGGCGACGCGACCCCTGTCTATCCGACA
ACTATCGACGAGCTGAAAGAGTACCTCACCTCCTCTTCGCCTCAGAACATTGTTATCGAGGGTACTTTCGACTTT
GTCGGTTCTGAGGGCACCAAAACTTATCAGGCTTGTAACATCTATGACTGCACACCGGATAATGGTGGACAGGCT
ATACTTAACACGCTTGGGGGATGCGGGGACACCTCGACATATGACGTGACCATCGACGTTGCAGGATACCAGGGT
ATCAATGTCGCATCAGACAAAACTCTGGTCGGTAAAGGGACAGGCGCTGTGCTCAATGGCAAGGGCCTGCGGTTC
GTGGGCGTCTCCAACATCATCATTCAGAACATCGAAATCACCAACCTCAACCCGAAGTATGTTTGGGGAGGAGAT
GCTCTTACGTTCTCCGACACTAATCAGATCTGGATCGACCATGTCACCACCTCCTCACTAGGCCGCCAGCACTAT
AGTTTTGGCCAGGAGAGTGACAACGCCATCACCATCTCCAATAGCTTCATCAACGGGAAGACTGACTACTCTGCT
ACTTGTGATGGACACACGTACTGGGGCCTCGAGCTGGTCGGCTCCAGTGACCAAATCACCTTCTACAAAAACTAC
GTCTACTACACCTCCGGGCGCAGTCCCGCTCTCAGTGGCAATACACTCTTCCACGCAGTCAACAGTGTCTGGGCT
GATAACAGCGGTCACGCCATCGAAGGGACTGACAACGGCATGGGCCTTTTTGAGGGGAACGTGTTCAACAATGTC
CCCACCATTGTTCAGAGCGGCTTTGTCGGTCAGCTATTCAGCTCCGAGTCGGCCAATCTTAGCCAATGCGAGACG
TCCTTGGGAAGAGACTGTGTGACCAATGCTTACACCAGCTCTGGTTCCTTCAGTTATGATGACGATGGATTCTTT
GTTGACTTTGAGAACCTGCCCATTGTATCTGCTGCATCTGCATCTTCGATTGCGAGTACTGTTCCTTCGGATGCT
GGTAATACCCTGAGCAGCACCTAA
Transcript >Ani_SJS72_1|g9484.t1
ATGAGGCCCGATCTTCTATCTACCTTCGTGACCGTGATGGCCTTCGCGCATCATGCCGAAGCAGCGCAGTCTTCT
ATTGTCTCGGGGAGTGCTCCCGGCTTCGCAGCGGGCGTGACGGGAGGAGGCGACGCGACCCCTGTCTATCCGACA
ACTATCGACGAGCTGAAAGAGTACCTCACCTCCTCTTCGCCTCAGAACATTGTTATCGAGGGTACTTTCGACTTT
GTCGGTTCTGAGGGCACCAAAACTTATCAGGCTTGTAACATCTATGACTGCACACCGGATAATGGTGGACAGGCT
ATACTTAACACGCTTGGGGGATGCGGGGACACCTCGACATATGACGTGACCATCGACGTTGCAGGATACCAGGGT
ATCAATGTCGCATCAGACAAAACTCTGGTCGGTAAAGGGACAGGCGCTGTGCTCAATGGCAAGGGCCTGCGGTTC
GTGGGCGTCTCCAACATCATCATTCAGAACATCGAAATCACCAACCTCAACCCGAAGTATGTTTGGGGAGGAGAT
GCTCTTACGTTCTCCGACACTAATCAGATCTGGATCGACCATGTCACCACCTCCTCACTAGGCCGCCAGCACTAT
AGTTTTGGCCAGGAGAGTGACAACGCCATCACCATCTCCAATAGCTTCATCAACGGGAAGACTGACTACTCTGCT
ACTTGTGATGGACACACGTACTGGGGCCTCGAGCTGGTCGGCTCCAGTGACCAAATCACCTTCTACAAAAACTAC
GTCTACTACACCTCCGGGCGCAGTCCCGCTCTCAGTGGCAATACACTCTTCCACGCAGTCAACAGTGTCTGGGCT
GATAACAGCGGTCACGCCATCGAAGGGACTGACAACGGCATGGGCCTTTTTGAGGGGAACGTGTTCAACAATGTC
CCCACCATTGTTCAGAGCGGCTTTGTCGGTCAGCTATTCAGCTCCGAGTCGGCCAATCTTAGCCAATGCGAGACG
TCCTTGGGAAGAGACTGTGTGACCAATGCTTACACCAGCTCTGGTTCCTTCAGTTATGATGACGATGGATTCTTT
GTTGACTTTGAGAACCTGCCCATTGTATCTGCTGCATCTGCATCTTCGATTGCGAGTACTGTTCCTTCGGATGCT
GGTAATACCCTGAGCAGCACCTAA
Gene >Ani_SJS72_1|g9484.t1
ATGAGGCCCGATCTTCTATCTACCTTCGTGACCGTGATGGCCTTCGCGCATCATGCCGAAGCAGCGCAGTCTTCT
ATTGTCTCGGGGAGTGCTCCCGGCTTCGCAGCGGGCGTGACGGGAGGAGGCGACGCGACCCCTGTCTATCCGACA
ACTATCGACGAGCTGAAAGAGTACCTCACCTCCTCTTCGCCTCAGAACATTGTTATCGAGGGTACTTTCGACTTT
GTCGGTTCTGAGGGCACCAAAACTTATCAGGCTTGTAACATCTATGACTGCACACCGGATAATGGTGGACAGGCT
ATACTTAACACGCTTGGGGGATGCGGGGACACCTCGACATATGACGTGACCATCGACGTTGCAGGATACCAGGGT
ATCAATGTCGCATCAGACAAAACTCTGGTCGGTAAAGGGACAGGCGCTGTGCTCAATGGCAAGGGCCTGCGGTTC
GTGGGCGTCTCCAACATCATCATTCAGAACATCGAAATCACCAACCTCAACCCGAAGTATGTTTGGGGAGGAGAT
GCTCTTACGTTCTCCGACACTAATCAGATCTGGATCGACCATGTCACCACCTCCTCACTAGGCCGCCAGCACTAT
AGTTTTGGCCAGGAGAGTGACAACGCCATCACCATCTCCAATAGCTTCATCAACGGGAAGACTGACTACTCTGCT
ACTTGTGATGGACACACGTACTGGGGCCTCGAGCTGGTCGGCTCCAGTGACCAAATCACCTTCTACAGTGAGTTT
CAACTGGCTGGGTCCGCATCCTGATAGTTGAACGTGCAGATAAACTAAACGCAAAATTAGAAAACTACGTCTACT
ACACCTCCGGGCGCAGTCCCGCTCTCAGTGGCAATACACTCTTCCACGCAGTCAACAGTGTCTGGGCTGATAACA
GCGGTCACGCCATCGAAGGGACTGACAACGGCATGGGCCTTTTTGAGGGGAACGTGTTCAACAATGTCCCCACCA
TTGTTCAGAGCGGCTTTGTCGGTCAGCTATTCAGCTCCGAGTCGGCCAATCTTAGCCAATGCGAGACGTCCTTGG
GAAGAGACTGTGTGACCAATGCTTACACCAGCTCTGGTTCCTTCAGTTATGATGACGATGGATTCTTTGTTGACT
TTGAGAACCTGCCCATTGTATCTGCTGCATCTGCATCTTCGATTGCGAGTACTGTTCCTTCGGATGCTGGTAATA
CCCTGAGCAGCACCTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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