Fungal Genomics

General Properties

Protein ID	Ani_SJS72_1|g9484.t1
Gene name
Location	scaffold_103:86545..87762
Strand	+
Gene length (bp)	1217
Transcript length (bp)	1149
Coding sequence length (bp)	1149
Protein length (aa)	383

Overview

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PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00544	Pectate_lyase_4	Pectate lyase	2.2E-10	123	297

GO

(None)

Deeploc

Deeploc data not available for this genome

SignalP

SignalP signal predicted	Location	Score
Yes	1 - 21	0.999522

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

CAZyme category	E-value	Start	End
PL1_4	3.1E-79	116	299

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID	3
Orthogroup	10573
Change Orthofinder run	3: Aspergillus niger - all strains

Species	Protein ID
Aspergillus niger CBS 113.50	Ani_SJS3_1|g4206.t1
Aspergillus niger CBS 118.52	Ani_SJS14_1|g1937.t1
Aspergillus niger CBS 124.48	Ani_SJS7_1|g1634.t1
Aspergillus niger CBS 131.52	Ani_SJS8_1|g10320.t1
Aspergillus niger CBS 133816	Ani_SJS71_1|g6568.t1
Aspergillus niger CBS 147320	Ani_SJS28_1|g4.t1
Aspergillus niger CBS 147321	Ani_SJS30_1|g3458.t1
Aspergillus niger CBS 147322	Ani_SJS35_1|g1446.t1
Aspergillus niger CBS 147323	Ani_SJS38_1|g9431.t1
Aspergillus niger CBS 147324	Ani_SJS39_1|g4843.t1
Aspergillus niger CBS 147343	Ani_SJS115_1|g2223.t1
Aspergillus niger CBS 147344	Ani_SJS70_1|g5488.t1
Aspergillus niger CBS 147345	Ani_SJS72_1|g9484.t1 (this protein)
Aspergillus niger CBS 147346	Ani_SJS75_1|g1595.t1
Aspergillus niger CBS 147347	Ani_SJS76_1|g1118.t1
Aspergillus niger CBS 147352	Ani_SJS95_1|g1759.t1
Aspergillus niger CBS 147353	Ani_SJS100_1|g9711.t1
Aspergillus niger CBS 147371	Ani_SJS27_1|g9633.t1
Aspergillus niger CBS 147482	Ani_SJS55_1|g2341.t1
Aspergillus niger CBS 630.78	Ani_SJS18_1|g7102.t1
Aspergillus niger CBS 769.97	Ani_SJS82_1|g10447.t1

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus Download genbank file of locus (reverse complement) The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ani_SJS72_1|g9484.t1 MRPDLLSTFVTVMAFAHHAEAAQSSIVSGSAPGFAAGVTGGGDATPVYPTTIDELKEYLTSSSPQNIVIEGTFDF VGSEGTKTYQACNIYDCTPDNGGQAILNTLGGCGDTSTYDVTIDVAGYQGINVASDKTLVGKGTGAVLNGKGLRF VGVSNIIIQNIEITNLNPKYVWGGDALTFSDTNQIWIDHVTTSSLGRQHYSFGQESDNAITISNSFINGKTDYSA TCDGHTYWGLELVGSSDQITFYKNYVYYTSGRSPALSGNTLFHAVNSVWADNSGHAIEGTDNGMGLFEGNVFNNV PTIVQSGFVGQLFSSESANLSQCETSLGRDCVTNAYTSSGSFSYDDDGFFVDFENLPIVSAASASSIASTVPSDA GNTLSST*
Coding	>Ani_SJS72_1|g9484.t1 ATGAGGCCCGATCTTCTATCTACCTTCGTGACCGTGATGGCCTTCGCGCATCATGCCGAAGCAGCGCAGTCTTCT ATTGTCTCGGGGAGTGCTCCCGGCTTCGCAGCGGGCGTGACGGGAGGAGGCGACGCGACCCCTGTCTATCCGACA ACTATCGACGAGCTGAAAGAGTACCTCACCTCCTCTTCGCCTCAGAACATTGTTATCGAGGGTACTTTCGACTTT GTCGGTTCTGAGGGCACCAAAACTTATCAGGCTTGTAACATCTATGACTGCACACCGGATAATGGTGGACAGGCT ATACTTAACACGCTTGGGGGATGCGGGGACACCTCGACATATGACGTGACCATCGACGTTGCAGGATACCAGGGT ATCAATGTCGCATCAGACAAAACTCTGGTCGGTAAAGGGACAGGCGCTGTGCTCAATGGCAAGGGCCTGCGGTTC GTGGGCGTCTCCAACATCATCATTCAGAACATCGAAATCACCAACCTCAACCCGAAGTATGTTTGGGGAGGAGAT GCTCTTACGTTCTCCGACACTAATCAGATCTGGATCGACCATGTCACCACCTCCTCACTAGGCCGCCAGCACTAT AGTTTTGGCCAGGAGAGTGACAACGCCATCACCATCTCCAATAGCTTCATCAACGGGAAGACTGACTACTCTGCT ACTTGTGATGGACACACGTACTGGGGCCTCGAGCTGGTCGGCTCCAGTGACCAAATCACCTTCTACAAAAACTAC GTCTACTACACCTCCGGGCGCAGTCCCGCTCTCAGTGGCAATACACTCTTCCACGCAGTCAACAGTGTCTGGGCT GATAACAGCGGTCACGCCATCGAAGGGACTGACAACGGCATGGGCCTTTTTGAGGGGAACGTGTTCAACAATGTC CCCACCATTGTTCAGAGCGGCTTTGTCGGTCAGCTATTCAGCTCCGAGTCGGCCAATCTTAGCCAATGCGAGACG TCCTTGGGAAGAGACTGTGTGACCAATGCTTACACCAGCTCTGGTTCCTTCAGTTATGATGACGATGGATTCTTT GTTGACTTTGAGAACCTGCCCATTGTATCTGCTGCATCTGCATCTTCGATTGCGAGTACTGTTCCTTCGGATGCT GGTAATACCCTGAGCAGCACCTAA
Transcript	>Ani_SJS72_1|g9484.t1 ATGAGGCCCGATCTTCTATCTACCTTCGTGACCGTGATGGCCTTCGCGCATCATGCCGAAGCAGCGCAGTCTTCT ATTGTCTCGGGGAGTGCTCCCGGCTTCGCAGCGGGCGTGACGGGAGGAGGCGACGCGACCCCTGTCTATCCGACA ACTATCGACGAGCTGAAAGAGTACCTCACCTCCTCTTCGCCTCAGAACATTGTTATCGAGGGTACTTTCGACTTT GTCGGTTCTGAGGGCACCAAAACTTATCAGGCTTGTAACATCTATGACTGCACACCGGATAATGGTGGACAGGCT ATACTTAACACGCTTGGGGGATGCGGGGACACCTCGACATATGACGTGACCATCGACGTTGCAGGATACCAGGGT ATCAATGTCGCATCAGACAAAACTCTGGTCGGTAAAGGGACAGGCGCTGTGCTCAATGGCAAGGGCCTGCGGTTC GTGGGCGTCTCCAACATCATCATTCAGAACATCGAAATCACCAACCTCAACCCGAAGTATGTTTGGGGAGGAGAT GCTCTTACGTTCTCCGACACTAATCAGATCTGGATCGACCATGTCACCACCTCCTCACTAGGCCGCCAGCACTAT AGTTTTGGCCAGGAGAGTGACAACGCCATCACCATCTCCAATAGCTTCATCAACGGGAAGACTGACTACTCTGCT ACTTGTGATGGACACACGTACTGGGGCCTCGAGCTGGTCGGCTCCAGTGACCAAATCACCTTCTACAAAAACTAC GTCTACTACACCTCCGGGCGCAGTCCCGCTCTCAGTGGCAATACACTCTTCCACGCAGTCAACAGTGTCTGGGCT GATAACAGCGGTCACGCCATCGAAGGGACTGACAACGGCATGGGCCTTTTTGAGGGGAACGTGTTCAACAATGTC CCCACCATTGTTCAGAGCGGCTTTGTCGGTCAGCTATTCAGCTCCGAGTCGGCCAATCTTAGCCAATGCGAGACG TCCTTGGGAAGAGACTGTGTGACCAATGCTTACACCAGCTCTGGTTCCTTCAGTTATGATGACGATGGATTCTTT GTTGACTTTGAGAACCTGCCCATTGTATCTGCTGCATCTGCATCTTCGATTGCGAGTACTGTTCCTTCGGATGCT GGTAATACCCTGAGCAGCACCTAA
Gene	>Ani_SJS72_1|g9484.t1 ATGAGGCCCGATCTTCTATCTACCTTCGTGACCGTGATGGCCTTCGCGCATCATGCCGAAGCAGCGCAGTCTTCT ATTGTCTCGGGGAGTGCTCCCGGCTTCGCAGCGGGCGTGACGGGAGGAGGCGACGCGACCCCTGTCTATCCGACA ACTATCGACGAGCTGAAAGAGTACCTCACCTCCTCTTCGCCTCAGAACATTGTTATCGAGGGTACTTTCGACTTT GTCGGTTCTGAGGGCACCAAAACTTATCAGGCTTGTAACATCTATGACTGCACACCGGATAATGGTGGACAGGCT ATACTTAACACGCTTGGGGGATGCGGGGACACCTCGACATATGACGTGACCATCGACGTTGCAGGATACCAGGGT ATCAATGTCGCATCAGACAAAACTCTGGTCGGTAAAGGGACAGGCGCTGTGCTCAATGGCAAGGGCCTGCGGTTC GTGGGCGTCTCCAACATCATCATTCAGAACATCGAAATCACCAACCTCAACCCGAAGTATGTTTGGGGAGGAGAT GCTCTTACGTTCTCCGACACTAATCAGATCTGGATCGACCATGTCACCACCTCCTCACTAGGCCGCCAGCACTAT AGTTTTGGCCAGGAGAGTGACAACGCCATCACCATCTCCAATAGCTTCATCAACGGGAAGACTGACTACTCTGCT ACTTGTGATGGACACACGTACTGGGGCCTCGAGCTGGTCGGCTCCAGTGACCAAATCACCTTCTACAGTGAGTTT CAACTGGCTGGGTCCGCATCCTGATAGTTGAACGTGCAGATAAACTAAACGCAAAATTAGAAAACTACGTCTACT ACACCTCCGGGCGCAGTCCCGCTCTCAGTGGCAATACACTCTTCCACGCAGTCAACAGTGTCTGGGCTGATAACA GCGGTCACGCCATCGAAGGGACTGACAACGGCATGGGCCTTTTTGAGGGGAACGTGTTCAACAATGTCCCCACCA TTGTTCAGAGCGGCTTTGTCGGTCAGCTATTCAGCTCCGAGTCGGCCAATCTTAGCCAATGCGAGACGTCCTTGG GAAGAGACTGTGTGACCAATGCTTACACCAGCTCTGGTTCCTTCAGTTATGATGACGATGGATTCTTTGTTGACT TTGAGAACCTGCCCATTGTATCTGCTGCATCTGCATCTTCGATTGCGAGTACTGTTCCTTCGGATGCTGGTAATA CCCTGAGCAGCACCTAA