Protein ID | Ani_SJS72_1|g943.t1 |
Gene name | |
Location | scaffold_004:385489..386737 |
Strand | - |
Gene length (bp) | 1248 |
Transcript length (bp) | 861 |
Coding sequence length (bp) | 861 |
Protein length (aa) | 287 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00635 | Motile_Sperm | MSP (Major sperm protein) domain | 1.9E-23 | 4 | 95 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 266 | 285 | 19 |
Orthofinder run ID | 3 |
Orthogroup | 4784 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS72_1|g943.t1 MSIILEPPELGFKRPFDREVCQILHLKNDNAEPVVFKVKTTAPKHYCVRPNSGRIDPGKNVDVQVLLQAMKEEPA DDAKCKDKFLVQTVAVTRDMEFANVTSIFEKSSKASLQERKIRVNWLPADDSSAAEQVTETNGTMPEEEPPAYTS PPNANFQTPAAAVAKSANDTSPIPPPDFSDKPKREVSTPQAIAESPATSTKSAMMGGAASSSDDLKAQLSEANAQ ILALKEKLADQGLRQRKIGGETEKAPAPLVQQQPQSAEAGVPVQMVAGLCLLSFLIAYFFF* |
Coding | >Ani_SJS72_1|g943.t1 ATGTCTATTATTCTCGAGCCTCCGGAGTTGGGATTCAAGCGCCCCTTCGATCGTGAGGTGTGCCAGATCTTGCAT TTGAAGAATGACAACGCTGAGCCGGTGGTCTTCAAGGTTAAAACGACTGCCCCTAAACATTACTGTGTTCGCCCG AACTCGGGCCGGATAGATCCTGGAAAGAATGTCGACGTTCAAGTTCTGCTCCAGGCCATGAAGGAAGAACCTGCA GATGATGCCAAGTGCAAGGACAAGTTTCTAGTCCAGACTGTTGCCGTCACTCGCGATATGGAGTTCGCCAATGTT ACTTCGATTTTCGAGAAATCTTCCAAGGCTTCGCTTCAAGAACGCAAGATCCGTGTGAACTGGTTGCCTGCAGAT GATTCCTCAGCTGCCGAACAAGTCACCGAAACGAATGGCACTATGCCGGAAGAAGAACCCCCAGCCTACACCTCT CCTCCTAATGCGAACTTCCAGACACCTGCTGCAGCAGTTGCTAAAAGCGCTAACGACACGTCACCGATCCCACCG CCAGATTTCAGCGATAAGCCCAAGCGGGAAGTGTCGACCCCACAAGCGATTGCTGAGAGCCCAGCCACGTCTACA AAGTCGGCCATGATGGGCGGGGCAGCAAGTTCAAGCGATGATCTGAAAGCCCAATTGTCCGAGGCTAACGCGCAG ATTTTGGCGCTGAAGGAGAAGCTCGCAGATCAGGGCCTGAGGCAGCGGAAGATCGGAGGTGAAACCGAAAAGGCG CCGGCGCCATTGGTGCAGCAGCAGCCGCAATCTGCCGAGGCAGGCGTGCCAGTGCAGATGGTCGCTGGCTTGTGC CTCCTCAGTTTCCTGATCGCATACTTCTTCTTCTAA |
Transcript | >Ani_SJS72_1|g943.t1 ATGTCTATTATTCTCGAGCCTCCGGAGTTGGGATTCAAGCGCCCCTTCGATCGTGAGGTGTGCCAGATCTTGCAT TTGAAGAATGACAACGCTGAGCCGGTGGTCTTCAAGGTTAAAACGACTGCCCCTAAACATTACTGTGTTCGCCCG AACTCGGGCCGGATAGATCCTGGAAAGAATGTCGACGTTCAAGTTCTGCTCCAGGCCATGAAGGAAGAACCTGCA GATGATGCCAAGTGCAAGGACAAGTTTCTAGTCCAGACTGTTGCCGTCACTCGCGATATGGAGTTCGCCAATGTT ACTTCGATTTTCGAGAAATCTTCCAAGGCTTCGCTTCAAGAACGCAAGATCCGTGTGAACTGGTTGCCTGCAGAT GATTCCTCAGCTGCCGAACAAGTCACCGAAACGAATGGCACTATGCCGGAAGAAGAACCCCCAGCCTACACCTCT CCTCCTAATGCGAACTTCCAGACACCTGCTGCAGCAGTTGCTAAAAGCGCTAACGACACGTCACCGATCCCACCG CCAGATTTCAGCGATAAGCCCAAGCGGGAAGTGTCGACCCCACAAGCGATTGCTGAGAGCCCAGCCACGTCTACA AAGTCGGCCATGATGGGCGGGGCAGCAAGTTCAAGCGATGATCTGAAAGCCCAATTGTCCGAGGCTAACGCGCAG ATTTTGGCGCTGAAGGAGAAGCTCGCAGATCAGGGCCTGAGGCAGCGGAAGATCGGAGGTGAAACCGAAAAGGCG CCGGCGCCATTGGTGCAGCAGCAGCCGCAATCTGCCGAGGCAGGCGTGCCAGTGCAGATGGTCGCTGGCTTGTGC CTCCTCAGTTTCCTGATCGCATACTTCTTCTTCTAA |
Gene | >Ani_SJS72_1|g943.t1 ATGTCTATTATTCTCGAGCCTCCGGAGTTGGGATTCAAGCGTACGTGGTGTCCTGAATCGATCTATATACCCCCC TCCTGGAAGTATCCGAGAGCTGACTAAATCCCCAGGCCCCTTCGATCGTGAGGTGTGCCAGATCTTGCATTTGAA GAATGACAACGCTGAGCCGGTGGTCTTCAAGGTTGGTTATATCGACTTCCCTGAACGTCTTTGGATTGTCTTATG CTAACAACGAATCTCCCTCCAGGTTAAAACGACTGCCCCTAAACAGTACGTGGCCACACCCCTTCGTCATTAGCC ATACTAGTATCGTTGCAACAAGGGTTTAACATGAAATAGTTACTGTGTTCGCCCGAACTCGGGCCGGATAGATCC TGGAAAGAATGTCGACGTTCAAGGTTGGTTTCTCAGTGCCTCGTTGGATTGTTGCCGTTGCGCAATGGCTGACGA TCTCGATAGTTCTGCTCCAGGCCATGAAGGAAGAACCTGCAGATGATGCCAAGTGCAAGGACAAGTTTCTAGTCC AGACTGTTGCCGTCACTCGCGATATGGAGTTCGCCAATGTTACTTCGATTGTATGTCTGTTTTCATGGTGATCCC CACCGGCAGCAATCTAACATAATCCCATAGTTCGAGAAATCTTCCAAGGCTTCGCTTCAAGAACGCAAGATCCGT GTGAACTGGTTGCCTGCAGATGATTCCTCAGCTGCCGAACAAGTCACCGAAACGAATGGCGTAACTAACCCCTCA CCGACCCCTTTTCGGATCTCCAGCCATCGGATAACTAATTGTTCTATTTAGACTATGCCGGAAGAAGAACCCCCA GCCTACACCTCTCCTCCTAATGCGAACTTCCAGACACCTGCTGCAGCAGTTGCTAAAAGCGCTAACGACACGTCA CCGATCCCACCGCCAGATTTCAGCGATAAGCCCAAGCGGGAAGTGTCGACCCCACAAGCGATTGCTGAGAGCCCA GCCACGTCTACAAAGTCGGCCATGATGGGCGGGGCAGCAAGTTCAAGCGATGATCTGAAAGCCCAATTGTCCGAG GCTAACGCGCAGATTTTGGCGCTGAAGGAGAAGCTCGCAGATCAGGGCCTGAGGCAGCGGAAGATCGGAGGTGAA ACCGAAAAGGCGCCGGCGCCATTGGTGCAGCAGCAGCCGCAATCTGCCGAGGCAGGCGTGCCAGTGCAGATGGTC GCTGGCTTGTGCCTCCTCAGTTTCCTGATCGCATACTTCTTCTTCTAA |