© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g9404.t1 |
| Gene name | |
| Location | scaffold_101:74608..78356 |
| Strand | - |
| Gene length (bp) | 3748 |
| Transcript length (bp) | 1938 |
| Coding sequence length (bp) | 1938 |
| Protein length (aa) | 646 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00096 | zf-C2H2 | Zinc finger, C2H2 type | 1.5E-04 | 521 | 544 |
| PF00096 | zf-C2H2 | Zinc finger, C2H2 type | 2.4E-06 | 550 | 572 |
| PF12874 | zf-met | Zinc-finger of C2H2 type | 1.8E-02 | 521 | 542 |
| Transcription Factor Class (based on PFAM domains) |
|---|
| C2H2 zinc finger |
| Orthofinder run ID | 3 |
| Orthogroup | 9299 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g9404.t1 MCPTHLRLFWAPRPTCSDQLSLLLYSQRPTIYTMDGTYTMAPTSVQGQPSFAYYADSQQRQHFTSHPSDMQSYYG QVQAFQQQPQHCMPEQQTLYTAPLMNMHQMATTNAFRGAMNMTPIASPQPSHLKPTIVVQQGSPALMPLDTRFVG NDYYAFPSTPPLSTAGSSISSPPSTSGTLHTPINDSFFAFEKVEGVKEGCEGDVHAEILANADWARSDSPPLTPV FIHPPSLTASQTSELLSAHSSCPSLSPSPSPVVPTFVAQPQGLPTEQSSSDFCDPRQLTVESSINATPAELPPLP TLSCDDEEPRVVLGSEAVTLPVHETLSPAFTCSSSEDPLSSLPTFDSFSDLDSEDEFVNRLVDFPPSGNAYYLGE KRQRVGTTYPLEEEEFFSEQSFDESDEQDLSQSSLPYLGSHDFTGVQTNINEASEEMGNKKRNNRKSLKRASTSD SETDSISKKSQPSINSRATSTETNASTPQTVQARHNSDAHSSCASEAPAAPVSVNRRGRKQSLTDDPSKTFVCTL CSRRFRRQEHLKRHYRSLHTQDKPFECNECGKKFSRSDNLAQHARTHAGGSVVMGVIDTGNATPPTPYEERDPST LGNVLYEAANAAATKSTTSESDESSSDSPVADRRAPKKRKRDSDA* |
| Coding | >Ani_SJS72_1|g9404.t1 ATGTGCCCCACGCACTTACGCCTTTTTTGGGCTCCGCGGCCGACGTGTAGTGACCAGCTATCTCTACTCTTGTAT TCACAACGTCCTACCATCTACACAATGGACGGAACATACACCATGGCACCTACTTCGGTGCAAGGTCAACCATCA TTTGCATACTACGCTGATTCGCAGCAAAGACAACATTTCACCAGCCACCCCTCAGATATGCAGTCATACTATGGC CAAGTGCAGGCCTTCCAGCAACAACCACAGCACTGCATGCCGGAGCAGCAGACACTCTACACTGCCCCTCTCATG AACATGCACCAGATGGCTACCACCAATGCCTTCCGTGGTGCCATGAACATGACTCCCATTGCCTCTCCTCAGCCG TCACACCTCAAGCCCACAATTGTTGTGCAGCAGGGCTCTCCCGCCCTGATGCCTCTGGACACGAGGTTCGTCGGT AACGACTACTACGCATTCCCCTCCACCCCACCACTCTCCACAGCTGGAAGCTCTATCAGCAGCCCGCCTTCTACC AGCGGCACCCTTCACACCCCGATCAATGACAGCTTCTTCGCTTTCGAGAAGGTGGAAGGTGTCAAGGAGGGATGC GAGGGAGACGTCCATGCAGAGATTCTGGCCAATGCTGACTGGGCCCGGTCTGACTCGCCGCCTCTTACACCTGTG TTCATCCATCCGCCTTCCCTCACCGCCAGCCAAACATCCGAGCTTCTGTCAGCGCACAGCTCTTGCCCATCCCTT TCCCCATCGCCATCTCCCGTGGTCCCCACATTCGTTGCCCAGCCTCAAGGTCTGCCGACCGAGCAGTCCAGCTCC GACTTCTGTGACCCCCGTCAGCTGACGGTTGAGTCCTCCATCAATGCCACCCCTGCTGAGCTGCCGCCTCTGCCC ACGCTCTCCTGCGATGACGAGGAGCCTCGGGTGGTTCTGGGCAGCGAGGCCGTGACCCTTCCTGTCCATGAGACC CTCTCTCCCGCCTTCACCTGCTCCTCTTCGGAGGACCCTCTCAGCAGCCTGCCGACCTTTGACAGCTTCTCGGAC CTGGACTCGGAAGACGAATTCGTCAACCGCCTGGTCGACTTCCCCCCTAGTGGCAATGCCTACTACTTGGGTGAG AAGAGGCAGCGCGTGGGAACGACATACCCCCTTGAGGAAGAGGAATTCTTCAGTGAGCAGAGCTTCGACGAGTCT GACGAGCAAGATCTCTCTCAGTCCAGTCTCCCTTACCTGGGAAGCCACGACTTCACTGGCGTCCAGACGAACATC AATGAAGCTTCGGAAGAGATGGGCAACAAGAAGAGGAACAACCGCAAGTCGCTGAAGCGGGCTAGTACCTCGGAC AGCGAAACGGATTCGATTAGCAAGAAGTCGCAGCCTTCGATCAACAGCCGTGCCACCAGCACTGAGACAAACGCC TCGACACCCCAGACTGTCCAGGCCCGCCACAACTCCGATGCGCATTCGTCGTGCGCTTCTGAGGCTCCTGCTGCC CCCGTCTCGGTCAACCGACGCGGTCGTAAGCAGTCCCTGACGGATGACCCCTCCAAGACCTTCGTGTGCACCCTC TGCTCCCGTCGCTTCCGTCGCCAAGAGCACCTCAAGCGTCACTACCGCTCTCTCCACACTCAGGACAAGCCTTTC GAGTGCAATGAGTGCGGTAAGAAGTTCTCGCGGAGCGATAACCTTGCGCAGCACGCTCGCACTCATGCGGGTGGC TCTGTCGTGATGGGCGTCATCGACACCGGCAATGCGACCCCGCCAACCCCCTATGAAGAACGAGACCCCAGTACG CTGGGAAATGTTCTCTACGAGGCCGCCAACGCCGCCGCTACCAAGTCCACAACCAGTGAGTCGGATGAGAGTTCC TCTGACTCGCCGGTTGCCGACCGACGGGCGCCCAAGAAGCGCAAGCGCGACAGCGATGCCTAG |
| Transcript | >Ani_SJS72_1|g9404.t1 ATGTGCCCCACGCACTTACGCCTTTTTTGGGCTCCGCGGCCGACGTGTAGTGACCAGCTATCTCTACTCTTGTAT TCACAACGTCCTACCATCTACACAATGGACGGAACATACACCATGGCACCTACTTCGGTGCAAGGTCAACCATCA TTTGCATACTACGCTGATTCGCAGCAAAGACAACATTTCACCAGCCACCCCTCAGATATGCAGTCATACTATGGC CAAGTGCAGGCCTTCCAGCAACAACCACAGCACTGCATGCCGGAGCAGCAGACACTCTACACTGCCCCTCTCATG AACATGCACCAGATGGCTACCACCAATGCCTTCCGTGGTGCCATGAACATGACTCCCATTGCCTCTCCTCAGCCG TCACACCTCAAGCCCACAATTGTTGTGCAGCAGGGCTCTCCCGCCCTGATGCCTCTGGACACGAGGTTCGTCGGT AACGACTACTACGCATTCCCCTCCACCCCACCACTCTCCACAGCTGGAAGCTCTATCAGCAGCCCGCCTTCTACC AGCGGCACCCTTCACACCCCGATCAATGACAGCTTCTTCGCTTTCGAGAAGGTGGAAGGTGTCAAGGAGGGATGC GAGGGAGACGTCCATGCAGAGATTCTGGCCAATGCTGACTGGGCCCGGTCTGACTCGCCGCCTCTTACACCTGTG TTCATCCATCCGCCTTCCCTCACCGCCAGCCAAACATCCGAGCTTCTGTCAGCGCACAGCTCTTGCCCATCCCTT TCCCCATCGCCATCTCCCGTGGTCCCCACATTCGTTGCCCAGCCTCAAGGTCTGCCGACCGAGCAGTCCAGCTCC GACTTCTGTGACCCCCGTCAGCTGACGGTTGAGTCCTCCATCAATGCCACCCCTGCTGAGCTGCCGCCTCTGCCC ACGCTCTCCTGCGATGACGAGGAGCCTCGGGTGGTTCTGGGCAGCGAGGCCGTGACCCTTCCTGTCCATGAGACC CTCTCTCCCGCCTTCACCTGCTCCTCTTCGGAGGACCCTCTCAGCAGCCTGCCGACCTTTGACAGCTTCTCGGAC CTGGACTCGGAAGACGAATTCGTCAACCGCCTGGTCGACTTCCCCCCTAGTGGCAATGCCTACTACTTGGGTGAG AAGAGGCAGCGCGTGGGAACGACATACCCCCTTGAGGAAGAGGAATTCTTCAGTGAGCAGAGCTTCGACGAGTCT GACGAGCAAGATCTCTCTCAGTCCAGTCTCCCTTACCTGGGAAGCCACGACTTCACTGGCGTCCAGACGAACATC AATGAAGCTTCGGAAGAGATGGGCAACAAGAAGAGGAACAACCGCAAGTCGCTGAAGCGGGCTAGTACCTCGGAC AGCGAAACGGATTCGATTAGCAAGAAGTCGCAGCCTTCGATCAACAGCCGTGCCACCAGCACTGAGACAAACGCC TCGACACCCCAGACTGTCCAGGCCCGCCACAACTCCGATGCGCATTCGTCGTGCGCTTCTGAGGCTCCTGCTGCC CCCGTCTCGGTCAACCGACGCGGTCGTAAGCAGTCCCTGACGGATGACCCCTCCAAGACCTTCGTGTGCACCCTC TGCTCCCGTCGCTTCCGTCGCCAAGAGCACCTCAAGCGTCACTACCGCTCTCTCCACACTCAGGACAAGCCTTTC GAGTGCAATGAGTGCGGTAAGAAGTTCTCGCGGAGCGATAACCTTGCGCAGCACGCTCGCACTCATGCGGGTGGC TCTGTCGTGATGGGCGTCATCGACACCGGCAATGCGACCCCGCCAACCCCCTATGAAGAACGAGACCCCAGTACG CTGGGAAATGTTCTCTACGAGGCCGCCAACGCCGCCGCTACCAAGTCCACAACCAGTGAGTCGGATGAGAGTTCC TCTGACTCGCCGGTTGCCGACCGACGGGCGCCCAAGAAGCGCAAGCGCGACAGCGATGCCTAG |
| Gene | >Ani_SJS72_1|g9404.t1 ATGTGCCCCACGCACTTACGCCTTTTTTGGGCTCCGCGGCCGACGTGGTGGGGCCCGGTTTCTGGCTAGTCCGGT CGGGGATTCGTCGTCTCTTGTTAACTTCTGATCCAACTTACTACAACTTTTCTGTCCATCCACTCTGCTCTCCCT CTCCCCCCCCCCATTCCCCTCTCTCCCTCCGTCCCTCCCTCCCTCCTCCACCCAAAATCCACTCTCCCAAATTGA GGAATGGCACAACATGTCCCGGCTAACTTAGGTTGGTCGGGTTCTACTACTACCTGCCTAGGTTGAATATTGCTC TGCTCCTGCTGCTAACTACTAACTAACTAACTGCTGCTGATGCCGCTGACTGTGATGATGAAGAAGCCCGCCGAG GAGGGCTCCACCTCCCGTTGGTCTCCGCTCCCAAGTTTCTCATTCGGTTGGTACTGAGATGTGCACCGGCGCCAA TCTGCTATTCTTTGCCGCCCCAGACTAGAAAATCGACTTACCCAGACGGATGTGCATAAGGATAAAAAAAAAAAG TGGGCAAGCATGATGCCAATTTGAGGATAATCGATCCCTCCCCCAAAATTATTTGGGGTCGAGAAAAGGCTGTGG GAAATTAGAAAAAAAAAAAAAAATGAGGAAATGGAAAATCCGAAATAATAAAAAATAAGGGTTCAAAAAATAAAT CCTGAAAAGAAATAAAAATAAATTTCCACGAAAAGAGAATAAAATAAGAAAAACATAATAATAAAAATAAAAAGG AAGAAAAAGAGAGTCTCCGAACATATGACACCATACCATTCCGGCAGATTTATTAGATGATTTATTACTATATTA CGATTACTACTACTATTATAGTAGTGACCGTTCGCTGCTGGCACCACCACCAGCGAAAGTAAAGTTCCATGCAGC CCATCTCGCCCAAAAAGGCTTTCAGACTAAAAAGTACGGCTCCAGTCCTACTGCTCACTACTCACGGCGCTACCA GCTCGTAGCACAAGCAGATCAGTCGCTCTTTTATCCACTGCCCATCCTTCTGGCCGGCTTTCCTCTTTCCATATC GGCCCTGTCTCTCATTTTCCCCGCGACTGTCCTCTTCTTTCAAATTAATCTTCTTTATTTCTTATTTTTTCCTTT TTTGCCCTTTTTAGACTTGTCTCGATCCTCATCTGGTCTTTCCTTTTCTCTTCCCTCTCTCTTTTATCTCTCTCT CTTAATCTTAATTGTCTGCCCTCTTTTTCTCTCTTTCACTTTTGCGACTCTATACAGTCTCTCCCGGTTTCCTTG AATCGAGAACGTCCTGAACCATATTCATCCTTTTTGGTTTGGCTCGTTTCGACACACAAGGTGCCTGTCCTTCCT TCATAGACTTGCGGCATAGTCGTCAGATATAATCCCAGATACCACCACCCCCATTCAACCTTTCTACCAAGAACG ATACAGTCGTTTGTCACAGCATACCAGTCAATCGATTAATCAATCAATCAATCTCGCTTCTCATATATACTCTAC TGGTTGAGAGCGGTCCCTGGATTATCATCTGTCCTTCCCCCAGTCATTCTCTCACACTCAAAGTGCAAGCGACTC TGCAAGACATTCATTCACCCCCAGCGCTCATCGCTGTGGACGAGCTACCAACTATATAACTAATAATATCCACTA AAGAGTAGAGCTATCTCTACTCTTGTATTCACAACGTCCTACCATCTGTGAGTTCACTTCTTCCTATTCATGGCG CAATGCGAGTGACTGACCGGGTTACCGTTCTTTATCTCTCTAGACACAATGGACGGAACATACACCATGGCACCT ACTTCGGTGCAAGGTCAACCATCATTTGCATACTACGCTGATTCGCAGCAAAGACAACATTTCACCAGCCACCCC TCAGATATGCAGTCATACTATGGCCAAGTGCAGGCCTTCCAGCAACAACCACAGCACTGCATGCCGGAGCAGCAG ACACTCTACACTGCCCCTCTCATGAACATGCACCAGATGGCTACCACCAATGCCTTCCGTGGTGCCATGAACATG ACTCCCATTGCCTCTCCTCAGCCGTCACACCTCAAGCCCACAATTGTTGTGCAGCAGGGCTCTCCCGCCCTGATG CCTCTGGACACGAGGTTCGTCGGTAACGACTACTACGCATTCCCCTCCACCCCACCACTCTCCACAGCTGGAAGC TCTATCAGCAGCCCGCCTTCTACCAGCGGCACCCTTCACACCCCGATCAATGACAGCTTCTTCGCTTTCGAGAAG GTGGAAGGTGTCAAGGAGGGATGCGAGGGAGACGTCCATGCAGAGATTCTGGCCAATGCTGACTGGGCCCGGTCT GACTCGCCGCCTCTTACACCTGGTAAGTCATTATCTAACCCGATGTCCCTTTTTTACATGGTTGCAAGATAGGCT GCAGGGAGTGGGTGCAGCCAACGGAAAAGGCACGGGGCCGGGCATCTAGGGTTGTACAGGGAGACTAACTCGACT TGTTCTAGTGTTCATCCATCCGCCTTCCCTCACCGCCAGCCAAACATCCGAGCTTCTGTCAGCGCACAGCTCTTG CCCATCCCTTTCCCCATCGCCATCTCCCGTGGTCCCCACATTCGTTGCCCAGCCTCAAGGTCTGCCGACCGAGCA GTCCAGCTCCGACTTCTGTGACCCCCGTCAGCTGACGGTTGAGTCCTCCATCAATGCCACCCCTGCTGAGCTGCC GCCTCTGCCCACGCTCTCCTGCGATGACGAGGAGCCTCGGGTGGTTCTGGGCAGCGAGGCCGTGACCCTTCCTGT CCATGAGACCCTCTCTCCCGCCTTCACCTGCTCCTCTTCGGAGGACCCTCTCAGCAGCCTGCCGACCTTTGACAG CTTCTCGGACCTGGACTCGGAAGACGAATTCGTCAACCGCCTGGTCGACTTCCCCCCTAGTGGCAATGCCTACTA CTTGGGTGAGAAGAGGCAGCGCGTGGGAACGACATACCCCCTTGAGGAAGAGGAATTCTTCAGTGAGCAGAGCTT CGACGAGTCTGACGAGCAAGATCTCTCTCAGTCCAGTCTCCCTTACCTGGGAAGCCACGACTTCACTGGCGTCCA GACGAACATCAATGAAGCTTCGGAAGAGATGGGCAACAAGAAGAGGAACAACCGCAAGTCGCTGAAGCGGGCTAG TACCTCGGACAGCGAAACGGATTCGATTAGCAAGAAGTCGCAGCCTTCGATCAACAGCCGTGCCACCAGCACTGA GACAAACGCCTCGACACCCCAGACTGTCCAGGCCCGCCACAACTCCGATGCGCATTCGTCGTGCGCTTCTGAGGC TCCTGCTGCCCCCGTCTCGGTCAACCGACGCGGTCGTAAGCAGTCCCTGACGGATGACCCCTCCAAGACCTTCGT GTGCACCCTCTGCTCCCGTCGCTTCCGTCGCCAAGAGCACCTCAAGCGTCACTACCGCTCTCTCCACACTCAGGA CAAGCCTTTCGAGTGCAATGAGTGCGGTAAGAAGTTCTCGCGGAGCGATAACCTTGCGCAGCACGCTCGCACTCA TGCGGGTGGCTCTGTCGTGATGGGCGTCATCGACACCGGCAATGCGACCCCGCCAACCCCCTATGAAGAACGAGA CCCCAGTACGCTGGGAAATGTTCTCTACGAGGCCGCCAACGCCGCCGCTACCAAGTCCACAACCAGTGAGTCGGA TGAGAGTTCCTCTGACTCGCCGGTTGCCGACCGACGGGCGCCCAAGAAGCGCAAGCGCGACAGCGATGCCTAG |