Protein ID | Ani_SJS72_1|g933.t1 |
Gene name | |
Location | scaffold_004:361264..363205 |
Strand | + |
Gene length (bp) | 1941 |
Transcript length (bp) | 1605 |
Coding sequence length (bp) | 1605 |
Protein length (aa) | 535 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01490 | Aa_trans | Transmembrane amino acid transporter protein | 2.0E-27 | 148 | 307 |
PF01490 | Aa_trans | Transmembrane amino acid transporter protein | 4.9E-43 | 320 | 518 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 70 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 154 | 173 | 19 |
2 | 180 | 202 | 22 |
3 | 225 | 247 | 22 |
4 | 267 | 289 | 22 |
5 | 323 | 345 | 22 |
6 | 358 | 380 | 22 |
7 | 400 | 422 | 22 |
8 | 442 | 459 | 17 |
9 | 464 | 486 | 22 |
10 | 498 | 520 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS72_1|g933.t1 MPSDEGQRALLADQKGPDGPESQSLLSESPTQDFELVNHAVPTSSTPRGQPHQSSISQPVPEGQRRTPRTMNRVR FDLDDETEDEGHPNGRRDSEDSWLEEEDYGRADRNRSARQMVPLLTDIEAPSVTLATSDEFFPEEHLESARPRSG MRMAFMNMANSIIGAGIIGQPYALRQAGMFMGITLLVVLTIAVDWTIRLIVVNSKLSGADSFQATMQHCFGKSGL IAISVAQWAFAFGGMIAFCIIVGDTIPHVLSALFPSLRDMSFLWLLTDRRAIIVLLVLGISYPLSLYRDIAKLGK ASTFALIKSRGEVKSLLLVNDGFFQAVGVISFAFVCHHNSLLIYGSLKKPTMDRFARVTHYSTGVSLLMCLAMGI FGFLFFGSQTQGNVLNNFPSDNILVNIARLCFGLNMLTTLPLEAFVCRSVMTTYYFPDEPFNMNRHLIFTSALVV SAMAMALITCDLGAVFELIGATSAAALAYIFPPLCYIKLSNASHKAKIPSYVCIVFGITVMGVSLLQAVMKMISN EGGASTCSA* |
Coding | >Ani_SJS72_1|g933.t1 ATGCCCAGTGATGAAGGACAGCGCGCTCTCTTGGCCGACCAGAAAGGCCCCGATGGGCCAGAATCGCAGTCACTT CTCTCCGAGTCGCCGACACAGGACTTCGAGCTTGTGAACCATGCGGTCCCGACTAGCTCGACTCCCCGCGGACAG CCGCACCAGTCTTCCATATCACAGCCGGTACCAGAAGGACAGCGCCGCACCCCTCGAACGATGAACCGAGTTCGC TTCGACCTTGACGACGAGACCGAGGACGAGGGCCACCCCAATGGTCGTCGCGACTCCGAAGACTCATGGCTGGAG GAAGAGGACTATGGCCGCGCGGACCGCAACCGGTCAGCAAGGCAAATGGTCCCTCTGTTGACAGACATTGAGGCC CCGAGTGTGACCCTGGCTACTTCCGATGAATTCTTTCCTGAAGAACACCTAGAAAGTGCGAGGCCGAGGAGTGGG ATGCGCATGGCCTTTATGAATATGGCCAATAGCATTATAGGAGCGGGGATAATAGGACAGCCTTATGCCCTCCGA CAAGCTGGCATGTTCATGGGAATAACGCTCCTGGTTGTCCTCACTATTGCCGTGGATTGGACAATCCGTCTGATT GTGGTCAATTCAAAGTTGAGCGGTGCGGATTCTTTCCAGGCGACAATGCAGCATTGTTTTGGCAAGAGTGGACTC ATCGCCATATCGGTTGCGCAGTGGGCGTTTGCGTTTGGCGGCATGATTGCGTTCTGTATTATCGTTGGAGATACC ATACCGCATGTCTTGAGTGCCTTATTTCCTTCCCTTCGAGATATGTCGTTCCTCTGGCTTTTAACCGACAGACGC GCTATTATTGTTCTTCTTGTTCTTGGTATTTCGTATCCGCTGTCTCTGTACCGAGACATTGCTAAGCTAGGAAAA GCGTCTACCTTCGCATTGATCAAATCACGCGGGGAAGTGAAGAGCCTGCTCCTGGTTAATGATGGCTTCTTCCAG GCTGTTGGGGTGATATCATTCGCATTCGTATGCCATCACAATAGCCTTCTGATCTACGGTTCATTGAAGAAACCG ACAATGGACCGATTTGCAAGGGTAACCCACTACTCGACCGGTGTCTCACTCTTGATGTGCCTAGCTATGGGTATT TTTGGTTTCCTTTTCTTTGGATCGCAGACTCAAGGAAACGTCCTAAACAATTTCCCATCCGACAATATCCTGGTC AATATCGCACGACTATGCTTTGGCCTAAACATGCTCACTACTTTGCCGCTCGAAGCATTTGTATGTCGATCGGTA ATGACAACTTACTACTTTCCTGACGAGCCTTTCAACATGAACCGACACTTGATATTCACGTCGGCATTGGTCGTG TCCGCTATGGCTATGGCCTTGATAACGTGCGACCTGGGTGCAGTGTTCGAACTGATTGGCGCGACTAGCGCTGCT GCGCTGGCCTATATCTTTCCACCTCTTTGCTATATCAAGCTGAGCAATGCGTCGCACAAAGCCAAGATTCCCTCA TATGTGTGCATCGTATTTGGCATAACCGTAATGGGAGTCAGCCTGTTACAGGCTGTGATGAAGATGATAAGTAAC GAAGGCGGCGCAAGCACCTGCAGTGCTTAG |
Transcript | >Ani_SJS72_1|g933.t1 ATGCCCAGTGATGAAGGACAGCGCGCTCTCTTGGCCGACCAGAAAGGCCCCGATGGGCCAGAATCGCAGTCACTT CTCTCCGAGTCGCCGACACAGGACTTCGAGCTTGTGAACCATGCGGTCCCGACTAGCTCGACTCCCCGCGGACAG CCGCACCAGTCTTCCATATCACAGCCGGTACCAGAAGGACAGCGCCGCACCCCTCGAACGATGAACCGAGTTCGC TTCGACCTTGACGACGAGACCGAGGACGAGGGCCACCCCAATGGTCGTCGCGACTCCGAAGACTCATGGCTGGAG GAAGAGGACTATGGCCGCGCGGACCGCAACCGGTCAGCAAGGCAAATGGTCCCTCTGTTGACAGACATTGAGGCC CCGAGTGTGACCCTGGCTACTTCCGATGAATTCTTTCCTGAAGAACACCTAGAAAGTGCGAGGCCGAGGAGTGGG ATGCGCATGGCCTTTATGAATATGGCCAATAGCATTATAGGAGCGGGGATAATAGGACAGCCTTATGCCCTCCGA CAAGCTGGCATGTTCATGGGAATAACGCTCCTGGTTGTCCTCACTATTGCCGTGGATTGGACAATCCGTCTGATT GTGGTCAATTCAAAGTTGAGCGGTGCGGATTCTTTCCAGGCGACAATGCAGCATTGTTTTGGCAAGAGTGGACTC ATCGCCATATCGGTTGCGCAGTGGGCGTTTGCGTTTGGCGGCATGATTGCGTTCTGTATTATCGTTGGAGATACC ATACCGCATGTCTTGAGTGCCTTATTTCCTTCCCTTCGAGATATGTCGTTCCTCTGGCTTTTAACCGACAGACGC GCTATTATTGTTCTTCTTGTTCTTGGTATTTCGTATCCGCTGTCTCTGTACCGAGACATTGCTAAGCTAGGAAAA GCGTCTACCTTCGCATTGATCAAATCACGCGGGGAAGTGAAGAGCCTGCTCCTGGTTAATGATGGCTTCTTCCAG GCTGTTGGGGTGATATCATTCGCATTCGTATGCCATCACAATAGCCTTCTGATCTACGGTTCATTGAAGAAACCG ACAATGGACCGATTTGCAAGGGTAACCCACTACTCGACCGGTGTCTCACTCTTGATGTGCCTAGCTATGGGTATT TTTGGTTTCCTTTTCTTTGGATCGCAGACTCAAGGAAACGTCCTAAACAATTTCCCATCCGACAATATCCTGGTC AATATCGCACGACTATGCTTTGGCCTAAACATGCTCACTACTTTGCCGCTCGAAGCATTTGTATGTCGATCGGTA ATGACAACTTACTACTTTCCTGACGAGCCTTTCAACATGAACCGACACTTGATATTCACGTCGGCATTGGTCGTG TCCGCTATGGCTATGGCCTTGATAACGTGCGACCTGGGTGCAGTGTTCGAACTGATTGGCGCGACTAGCGCTGCT GCGCTGGCCTATATCTTTCCACCTCTTTGCTATATCAAGCTGAGCAATGCGTCGCACAAAGCCAAGATTCCCTCA TATGTGTGCATCGTATTTGGCATAACCGTAATGGGAGTCAGCCTGTTACAGGCTGTGATGAAGATGATAAGTAAC GAAGGCGGCGCAAGCACCTGCAGTGCTTAG |
Gene | >Ani_SJS72_1|g933.t1 ATGCCCAGTGATGAAGGACAGCGCGCTCTCTTGGCCGACCAGAAAGGCCCCGATGGGCCAGAATCGCAGTCACTT CTCTCCGAGTCGCCGACACAGGACTTCGAGCTTGTGAACCATGCGGTCCCGACTAGCTCGACTCCCCGCGGACAG CCGCACCAGTCTTCCATATCACAGCCGGTACCAGAAGGACAGCGCCGCACCCCTCGAACGATGAACCGAGTTCGC TTCGACCTTGACGACGAGACCGAGGACGAGGGCCACCCCAATGGTCGTCGCGACTCCGAAGACTCATGGCTGGAG GAAGAGGACTATGGCCGCGCGGACCGCAACCGGTCAGCAAGGCAAATGGTCCCTCTGTTGACAGACATTGAGGCC CCGAGTGTGACCCTGGCTACTTCCGATGAATTCTTTCCTGAAGAACACCTAGAAAGTGCGAGGCCGAGGAGTGGG ATGCGCATGGCCTTTATGAATATGGCCAATAGCATTATAGGAGCGGGGATAATAGGACAGCCTTATGCCCTCCGA CAAGCTGGCATGTTCATGGGAATAACGCTCCTGGTTGTCCTCACTATTGCCGTGGATTGGACAATCCGTCTGATT GTGGTCAATTCAAAGTTGAGCGGTGCGGATTCTTTCCAGGCGACAATGCAGCATTGTTTTGGCAAGAGTGGACTC ATCGCCATATCGGTTGCGCAGTGGGCGTTTGCGTTTGGCGGCATGATTGCGTTCTGTATTATCGTTGGAGATACC ATACCGCATGTCTTGAGTGCCTTATTTCCTTCCCTTCGAGATATGTCGTTCCTCTGGCTTTTAACCGACAGACGC GCTATTATTGTTCTTCTTGTTCTTGGTATTTCGTATCCGCTGTCTCTGTACCGAGACATTGCTAAGGTACAGTAT CAGTAATCCACAAAGCTGAATTATACAGTGCTGACTGTTCAATGTAGCTAGGAAAAGCGTCTACCTTCGCATTGA TCAGTATGATAGTCATTGTGGTAGCTGTGATAACCCAGGGTTTTCGCGTACCTCCAGAATCACGCGGGGAAGTGA AGAGCCTGCTCCTGGTTAATGATGGCTTCTTCCAGGCTGTTGGGGTGATATCATTCGGTATGTTCTGGCCATTGG TAGACTATGCGATCAAAGAACCGTACTGACTGTTTGCAGCATTCGTATGCCGTATGTAGCATTGTTCCTTTACAT GACCTGAGGCTAACAAATACAAAGATCACAATAGCCTTCTGATCTACGGTTCATTGAAGAAACCGACAATGGACC GATTTGCAAGGGTAACCCACTACTCGACCGGTGTCTCACTCTTGATGTGCCTAGCTATGGGTATTTTTGGTTTCC TTTTCTTTGGATCGCAGACTCAAGGAAACGTCCTAAACAATTTCCCATCCGACAATATCCTGGTCAATATCGCAC GACTGTAAGATCACGGCCCATGTTTCGCGGATTTTCAAGCTGACCCGAAGAAGATGCTTTGGCCTAAACATGCTC ACTACTTTGCCGCTCGAAGCATTTGTATGTCGATCGGTAATGACAACTTACTACTTTCCTGACGAGCCTTTCAAC ATGAACCGACACTTGATATTCACGTCGGCATTGGTCGTGTCCGCTATGGCTATGGCCTTGATAACGTGCGACCTG GGTGCAGTGTTCGAACTGATTGGCGCGACTAGCGCTGCTGCGCTGGCCTATATCTTTCCACCTCTTTGCTATATC AAGCTGAGCAATGCGTCGCACAAAGCCAAGATTCCCTCATATGTGTGCATCGTATTTGGCATAACCGTAATGGGA GTCAGCCTGTTACAGGCTGTGATGAAGATGATAAGTAGTAGGTCCAAGACCCAATCTATTTTATGGCCTCCGGAA TGGCTTTGCTAACAAGTTCCACCTGCTGCCATAGACGAAGGCGGCGCAAGCACCTGCAGTGCTTAG |