© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g9306.t1 |
| Gene name | |
| Location | scaffold_098:113292..114507 |
| Strand | + |
| Gene length (bp) | 1215 |
| Transcript length (bp) | 1158 |
| Coding sequence length (bp) | 1158 |
| Protein length (aa) | 386 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF04193 | PQ-loop | PQ loop repeat | 9.0E-21 | 14 | 72 |
| PF04193 | PQ-loop | PQ loop repeat | 1.5E-19 | 266 | 320 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 25 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 13 | 32 | 19 |
| 2 | 45 | 67 | 22 |
| 3 | 71 | 93 | 22 |
| 4 | 217 | 239 | 22 |
| 5 | 268 | 290 | 22 |
| 6 | 297 | 319 | 22 |
| 7 | 350 | 372 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g9306.t1 MFPAVTGNIDLEALSGICGSISIACWVVVFSPQIIENFRRGSADGLSLLFLIVWLAGDVFNILGAVLQGVLPTMI ILAVYYTLADVVLLAQCFYYRGFTLRDEPSSPPRPVSPITAETYDEDTEIPSPVVPRKPTERTALLTSKQRSASY QAPLDTRSPASSATITPHHQPLLAHRRHSASSFLHTTVDGTHLSPVTPLVEPAKQPRPPRTLTLLQATFFNGSAI ILVCAAGILGWYISQTSSLSSDKNNNNKHKDSPDDLKMDTLGQVFGYLCAVLYLGSRLPQILLNYRRKSTDGVSL LFFLFACIGNLTYVLSILAYSPVCGRSHHGRCRSDELASLYGRYILVNLSWLIGSFGTLLLDMCIFIQFFLYQDA NGGEVDAEAR* |
| Coding | >Ani_SJS72_1|g9306.t1 ATGTTTCCCGCAGTCACCGGCAATATAGATCTAGAGGCACTGAGTGGCATATGTGGATCCATCTCGATTGCGTGC TGGGTGGTGGTCTTCTCCCCACAGATCATTGAAAATTTTCGTCGCGGCTCAGCTGATGGCCTTTCGCTTCTTTTC CTCATCGTCTGGCTTGCCGGCGATGTGTTCAACATCCTCGGTGCCGTCCTGCAGGGCGTCCTGCCAACCATGATA ATTCTCGCGGTGTACTACACTTTAGCCGATGTGGTGCTCTTAGCACAATGCTTCTACTATCGGGGATTCACACTG CGCGACGAACCATCCTCGCCGCCGCGGCCTGTCTCTCCCATCACGGCAGAAACTTACGACGAGGACACTGAGATT CCCTCCCCTGTCGTGCCTCGGAAGCCCACAGAGCGCACCGCGTTGCTTACCTCCAAACAACGCAGTGCCTCTTAC CAGGCTCCTTTGGACACTCGTAGCCCAGCATCATCGGCTACCATCACTCCTCACCACCAGCCCTTGCTCGCCCAT CGCCGTCACTCCGCCTCTTCATTTCTTCATACGACCGTCGACGGAACTCACCTCTCCCCAGTGACTCCACTCGTC GAACCAGCCAAGCAACCCCGTCCCCCTCGAACCCTAACACTGCTCCAAGCCACCTTCTTCAACGGTTCGGCCATC ATCCTCGTCTGTGCCGCCGGCATCCTGGGCTGGTACATCAGCCAAACGTCATCACTCTCATCGGACAAGAATAAC AACAACAAGCATAAAGACAGCCCTGATGACCTGAAAATGGACACACTAGGCCAAGTTTTCGGCTACCTCTGCGCA GTCCTGTACCTCGGTTCCCGCCTCCCACAGATCCTCCTCAATTATCGCCGCAAGTCAACAGACGGTGTTTCCCTG CTGTTCTTCCTCTTCGCCTGTATCGGCAATTTGACCTACGTCCTTTCCATCTTGGCGTATTCGCCTGTGTGTGGA CGCTCGCATCATGGTCGGTGTCGATCTGATGAACTGGCATCGCTGTATGGTCGATATATCCTGGTCAATCTGTCT TGGCTGATTGGGAGCTTTGGCACGTTATTGCTGGATATGTGTATCTTTATTCAATTTTTCTTGTACCAGGATGCG AATGGGGGTGAGGTGGATGCAGAGGCGAGGTAA |
| Transcript | >Ani_SJS72_1|g9306.t1 ATGTTTCCCGCAGTCACCGGCAATATAGATCTAGAGGCACTGAGTGGCATATGTGGATCCATCTCGATTGCGTGC TGGGTGGTGGTCTTCTCCCCACAGATCATTGAAAATTTTCGTCGCGGCTCAGCTGATGGCCTTTCGCTTCTTTTC CTCATCGTCTGGCTTGCCGGCGATGTGTTCAACATCCTCGGTGCCGTCCTGCAGGGCGTCCTGCCAACCATGATA ATTCTCGCGGTGTACTACACTTTAGCCGATGTGGTGCTCTTAGCACAATGCTTCTACTATCGGGGATTCACACTG CGCGACGAACCATCCTCGCCGCCGCGGCCTGTCTCTCCCATCACGGCAGAAACTTACGACGAGGACACTGAGATT CCCTCCCCTGTCGTGCCTCGGAAGCCCACAGAGCGCACCGCGTTGCTTACCTCCAAACAACGCAGTGCCTCTTAC CAGGCTCCTTTGGACACTCGTAGCCCAGCATCATCGGCTACCATCACTCCTCACCACCAGCCCTTGCTCGCCCAT CGCCGTCACTCCGCCTCTTCATTTCTTCATACGACCGTCGACGGAACTCACCTCTCCCCAGTGACTCCACTCGTC GAACCAGCCAAGCAACCCCGTCCCCCTCGAACCCTAACACTGCTCCAAGCCACCTTCTTCAACGGTTCGGCCATC ATCCTCGTCTGTGCCGCCGGCATCCTGGGCTGGTACATCAGCCAAACGTCATCACTCTCATCGGACAAGAATAAC AACAACAAGCATAAAGACAGCCCTGATGACCTGAAAATGGACACACTAGGCCAAGTTTTCGGCTACCTCTGCGCA GTCCTGTACCTCGGTTCCCGCCTCCCACAGATCCTCCTCAATTATCGCCGCAAGTCAACAGACGGTGTTTCCCTG CTGTTCTTCCTCTTCGCCTGTATCGGCAATTTGACCTACGTCCTTTCCATCTTGGCGTATTCGCCTGTGTGTGGA CGCTCGCATCATGGTCGGTGTCGATCTGATGAACTGGCATCGCTGTATGGTCGATATATCCTGGTCAATCTGTCT TGGCTGATTGGGAGCTTTGGCACGTTATTGCTGGATATGTGTATCTTTATTCAATTTTTCTTGTACCAGGATGCG AATGGGGGTGAGGTGGATGCAGAGGCGAGGTAA |
| Gene | >Ani_SJS72_1|g9306.t1 ATGTTTCCCGCAGTCACCGGCAATATAGATCTAGAGGCACTGAGTGGCATATGTGGGTATGTTTATGCCAGAGTA TGCTAGAATTGGACATGTTCAATACTGATCACTGATAGATCCATCTCGATTGCGTGCTGGGTGGTGGTCTTCTCC CCACAGATCATTGAAAATTTTCGTCGCGGCTCAGCTGATGGCCTTTCGCTTCTTTTCCTCATCGTCTGGCTTGCC GGCGATGTGTTCAACATCCTCGGTGCCGTCCTGCAGGGCGTCCTGCCAACCATGATAATTCTCGCGGTGTACTAC ACTTTAGCCGATGTGGTGCTCTTAGCACAATGCTTCTACTATCGGGGATTCACACTGCGCGACGAACCATCCTCG CCGCCGCGGCCTGTCTCTCCCATCACGGCAGAAACTTACGACGAGGACACTGAGATTCCCTCCCCTGTCGTGCCT CGGAAGCCCACAGAGCGCACCGCGTTGCTTACCTCCAAACAACGCAGTGCCTCTTACCAGGCTCCTTTGGACACT CGTAGCCCAGCATCATCGGCTACCATCACTCCTCACCACCAGCCCTTGCTCGCCCATCGCCGTCACTCCGCCTCT TCATTTCTTCATACGACCGTCGACGGAACTCACCTCTCCCCAGTGACTCCACTCGTCGAACCAGCCAAGCAACCC CGTCCCCCTCGAACCCTAACACTGCTCCAAGCCACCTTCTTCAACGGTTCGGCCATCATCCTCGTCTGTGCCGCC GGCATCCTGGGCTGGTACATCAGCCAAACGTCATCACTCTCATCGGACAAGAATAACAACAACAAGCATAAAGAC AGCCCTGATGACCTGAAAATGGACACACTAGGCCAAGTTTTCGGCTACCTCTGCGCAGTCCTGTACCTCGGTTCC CGCCTCCCACAGATCCTCCTCAATTATCGCCGCAAGTCAACAGACGGTGTTTCCCTGCTGTTCTTCCTCTTCGCC TGTATCGGCAATTTGACCTACGTCCTTTCCATCTTGGCGTATTCGCCTGTGTGTGGACGCTCGCATCATGGTCGG TGTCGATCTGATGAACTGGCATCGCTGTATGGTCGATATATCCTGGTCAATCTGTCTTGGCTGATTGGGAGCTTT GGCACGTTATTGCTGGATATGTGTATCTTTATTCAATTTTTCTTGTACCAGGATGCGAATGGGGGTGAGGTGGAT GCAGAGGCGAGGTAA |