Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS72_1|g9241.t1
Gene name
Locationscaffold_097:432..1390
Strand-
Gene length (bp)958
Transcript length (bp)732
Coding sequence length (bp)732
Protein length (aa) 244

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12352 V-SNARE_C Snare region anchored in the vesicle membrane C-terminus 1.3E-14 155 216

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 48 0.45

Transmembrane Domains

Domain # Start End Length
1 222 241 19

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS72_1|g9241.t1
MNSLFNSALKQSSAIRRDLDTFSQSPATSSAALQGQIAASLASLSRTVDDYSALSKKELIPEKQEKAFERVKNFR
SELADYRQHFDRLRKEREEAQSVTNRNELLGRRPHHTATPENPYAQSSLPQSSAFGPSSSRSGLSFGASPADYNR
ETHALREQSFLASTNTQIDEFLDRGRAVLADLGQQREVLKGTQRRLYSVANTLGVSGDTIRKVERRARQDKWIFW
GGVVLFFLFCWAVLHFLR*
Coding >Ani_SJS72_1|g9241.t1
ATGAATTCCCTCTTCAATTCCGCCCTCAAGCAGTCATCTGCTATCCGCCGTGACCTGGATACCTTTTCCCAATCT
CCAGCTACCTCATCTGCCGCACTACAAGGCCAAATCGCTGCATCGCTAGCATCGTTATCGCGCACCGTTGACGAC
TACTCTGCCCTGTCCAAGAAGGAATTGATTCCGGAGAAGCAAGAGAAGGCATTCGAACGAGTCAAGAATTTCCGA
TCAGAACTGGCAGATTACCGGCAACACTTTGATCGACTACGGAAAGAACGAGAGGAAGCTCAATCCGTCACCAAC
CGCAATGAGCTCCTCGGTCGACGTCCCCATCACACAGCTACACCAGAGAACCCATATGCTCAATCATCCCTCCCC
CAGTCCTCTGCGTTCGGCCCTTCTTCGTCACGATCGGGGCTCAGCTTTGGAGCCTCGCCAGCCGACTACAACCGG
GAAACACATGCGCTTCGCGAACAAAGCTTCCTAGCGAGCACCAACACCCAGATTGATGAGTTTCTTGATCGGGGT
CGTGCTGTGCTTGCGGATCTGGGACAGCAGCGTGAAGTACTGAAGGGCACACAACGTCGACTCTACAGCGTTGCA
AACACACTGGGCGTCAGCGGCGACACAATCCGCAAGGTTGAGCGCCGCGCAAGACAAGACAAGTGGATCTTCTGG
GGTGGTGTAGTCCTATTCTTCCTGTTCTGCTGGGCTGTCCTGCACTTCTTGCGATAG
Transcript >Ani_SJS72_1|g9241.t1
ATGAATTCCCTCTTCAATTCCGCCCTCAAGCAGTCATCTGCTATCCGCCGTGACCTGGATACCTTTTCCCAATCT
CCAGCTACCTCATCTGCCGCACTACAAGGCCAAATCGCTGCATCGCTAGCATCGTTATCGCGCACCGTTGACGAC
TACTCTGCCCTGTCCAAGAAGGAATTGATTCCGGAGAAGCAAGAGAAGGCATTCGAACGAGTCAAGAATTTCCGA
TCAGAACTGGCAGATTACCGGCAACACTTTGATCGACTACGGAAAGAACGAGAGGAAGCTCAATCCGTCACCAAC
CGCAATGAGCTCCTCGGTCGACGTCCCCATCACACAGCTACACCAGAGAACCCATATGCTCAATCATCCCTCCCC
CAGTCCTCTGCGTTCGGCCCTTCTTCGTCACGATCGGGGCTCAGCTTTGGAGCCTCGCCAGCCGACTACAACCGG
GAAACACATGCGCTTCGCGAACAAAGCTTCCTAGCGAGCACCAACACCCAGATTGATGAGTTTCTTGATCGGGGT
CGTGCTGTGCTTGCGGATCTGGGACAGCAGCGTGAAGTACTGAAGGGCACACAACGTCGACTCTACAGCGTTGCA
AACACACTGGGCGTCAGCGGCGACACAATCCGCAAGGTTGAGCGCCGCGCAAGACAAGACAAGTGGATCTTCTGG
GGTGGTGTAGTCCTATTCTTCCTGTTCTGCTGGGCTGTCCTGCACTTCTTGCGATAG
Gene >Ani_SJS72_1|g9241.t1
ATGGTAAGTCGTCTAAGGCCTCAAAAGTGAAGCCTCGCTTTGAGGGGGTTGATTGCCATGCCTGATGGGTGCTTA
CATTGTCTATTGCTTAGAATTCCCTCTTCAATTCCGCCCTCAAGCAGTCATCTGCTATCCGCCGTGACCTGGATA
CCTTTTCCCAATCTCCAGCTACCTCATCTGCCGCACTACAAGGTAGGTTTCGAAACCGGTGCTTGTAGTGGCTCC
ACTACGCAACAGAAGGAAGCTCATGCGCATTGTAGGCCAAATCGCTGCATCGCTAGCATCGTTATCGCGCACCGT
TGACGACTACTCTGCCCTGTCCAAGAAGGAATTGATTCCGGAGAAGCAAGAGAAGGCATTCGAACGAGTCAAGAA
TTTCCGATCAGAACTGGCAGATTACCGGCAACACTTTGATCGACTACGGAAAGAACGAGAGGAAGCTGTAAGAAT
TTGCACTCAAATCTTCAAGCAGCGTTGAGACTCGATATGGCTGACCATGGTTTATCTATAGCAATCCGTCACCAA
CCGCAATGAGCTCCTCGGTCGACGTCCCCATCACACAGCTACACCAGAGAACCCATATGCTCAATCATCCCTCCC
CCAGTCCTCTGCGTTCGGCCCTTCTTCGTCACGATCGGGGCTCAGCTTTGGAGCCTCGCCAGCCGACTACAACCG
GGAAACACATGCGCTTCGCGAACAAAGCTTCCTAGCGAGCACCAACACCCAGATTGATGAGTTTCTTGATCGGGG
TCGTGCTGTGCTTGCGGATCTGGGACAGCAGCGTGAAGTACTGAAGGGCACACAACGTCGACTCTACAGCGTTGC
AAACACACTGGGCGTCAGCGGCGACACAATCCGCAAGGTTGAGCGCCGCGCAAGACAAGACAAGTGGATCTTCTG
GGGTGGTGTAGTCCTATTCTTCCTGTTCTGCTGGGCTGTCCTGCACTTCTTGCGATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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