© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g9232.t1 |
| Gene name | |
| Location | scaffold_096:86329..88313 |
| Strand | - |
| Gene length (bp) | 1984 |
| Transcript length (bp) | 1935 |
| Coding sequence length (bp) | 1935 |
| Protein length (aa) | 645 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13424 | TPR_12 | Tetratricopeptide repeat | 1.6E-16 | 301 | 371 |
| PF13424 | TPR_12 | Tetratricopeptide repeat | 1.4E-19 | 383 | 453 |
| PF13424 | TPR_12 | Tetratricopeptide repeat | 3.0E-17 | 427 | 497 |
| PF13424 | TPR_12 | Tetratricopeptide repeat | 1.1E-16 | 467 | 539 |
| PF13424 | TPR_12 | Tetratricopeptide repeat | 2.4E-08 | 506 | 552 |
| PF13424 | TPR_12 | Tetratricopeptide repeat | 3.3E-16 | 553 | 619 |
| PF13374 | TPR_10 | Tetratricopeptide repeat | 9.4E-07 | 304 | 335 |
| PF13374 | TPR_10 | Tetratricopeptide repeat | 1.3E-10 | 338 | 378 |
| PF13374 | TPR_10 | Tetratricopeptide repeat | 6.7E-12 | 380 | 419 |
| PF13374 | TPR_10 | Tetratricopeptide repeat | 5.3E-10 | 422 | 461 |
| PF13374 | TPR_10 | Tetratricopeptide repeat | 6.9E-10 | 464 | 503 |
| PF13374 | TPR_10 | Tetratricopeptide repeat | 6.8E-11 | 506 | 543 |
| PF13374 | TPR_10 | Tetratricopeptide repeat | 5.9E-10 | 554 | 591 |
| PF13374 | TPR_10 | Tetratricopeptide repeat | 7.0E-06 | 593 | 620 |
| PF00515 | TPR_1 | Tetratricopeptide repeat | 1.6E-06 | 556 | 580 |
| PF13176 | TPR_7 | Tetratricopeptide repeat | 7.3E-03 | 343 | 370 |
| PF13176 | TPR_7 | Tetratricopeptide repeat | 7.0E-03 | 385 | 407 |
| PF13176 | TPR_7 | Tetratricopeptide repeat | 1.8E-04 | 427 | 453 |
| PF13176 | TPR_7 | Tetratricopeptide repeat | 1.1E-04 | 510 | 539 |
| PF13176 | TPR_7 | Tetratricopeptide repeat | 1.5E-04 | 556 | 582 |
| PF13176 | TPR_7 | Tetratricopeptide repeat | 9.1E-03 | 598 | 619 |
| PF17874 | TPR_MalT | MalT-like TPR region | 6.9E-07 | 303 | 364 |
| PF17874 | TPR_MalT | MalT-like TPR region | 2.6E-12 | 381 | 488 |
| PF17874 | TPR_MalT | MalT-like TPR region | 2.6E-12 | 502 | 619 |
| PF13181 | TPR_8 | Tetratricopeptide repeat | 4.0E-03 | 341 | 367 |
| PF13181 | TPR_8 | Tetratricopeptide repeat | 6.3E-04 | 385 | 408 |
| PF13181 | TPR_8 | Tetratricopeptide repeat | 2.4E-03 | 424 | 450 |
| PF13181 | TPR_8 | Tetratricopeptide repeat | 3.3E-03 | 508 | 534 |
| PF13181 | TPR_8 | Tetratricopeptide repeat | 6.9E-04 | 556 | 580 |
| PF13181 | TPR_8 | Tetratricopeptide repeat | 1.0E-02 | 596 | 619 |
| PF13432 | TPR_16 | Tetratricopeptide repeat | 2.8E-04 | 386 | 451 |
| PF13432 | TPR_16 | Tetratricopeptide repeat | 6.3E-03 | 557 | 623 |
| PF07721 | TPR_4 | Tetratricopeptide repeat | 4.7E-01 | 386 | 403 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0042802 | identical protein binding | Yes |
| GO:0005515 | protein binding | Yes |
| GO:0003674 | molecular_function | No |
| GO:0005488 | binding | No |
| Orthofinder run ID | 3 |
| Orthogroup | 14 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g9232.t1 MLGRLRMTVEESLGVFEEFGEEVFGHSRFLDRILQPFTYKYSSERLRNGIEKVVQKHGRAEGDREWKRDMFPANE NKCKTAVVVRKVSEKTSNIEVFRTYDTAYQPATNVPTHLIALATASSPLYFPPVLINDNRYQDPAVSGFNNPSFI ALKEARQEFELSEKNTGAFVSVGSGHRDPDYSSFGSISVGTSFVWHLGALASNTRRLITRVDHQDLLMRFAKHPN YYRFSSTHLIGSLPLDDWRGRRGSKTLDYITYLTSAYLGTDEVRDALKKCAKRLVERRREEKALVPDHTSALSND HDRGIMYREQGKLDYAEQMFKQALAGQEEVLGSDHISTLRTANNLGDLYREQDQLDKAEQMYRKVLSGREKVLGL DHTSTLDTVNNLGNLYRDQGRLDEAEQMYMRAIAGQAKALGPDHTLTLRAVNNLGDLYREQGQLDKAEKMYVQAL AGQETTLGPDHILTLRTVNNLGVLYYEQGKLDETEQMYLRVLAGYEKVLGFDHMSTLRIINNIGVIYHDQGKLDE AAQMYQRALAGYEKVLGPYHETHASSLAIVNNLGNLYKNQGKLKKAEEMYQRALEGSEKALGPHHTSTLNAVNNL GNLYKNQGRLNEAEELYQRVPAWQGEGSRAGSQQDAATKRRLMG* |
| Coding | >Ani_SJS72_1|g9232.t1 ATGCTCGGTCGCTTGAGGATGACAGTAGAGGAAAGCTTAGGCGTGTTCGAGGAGTTCGGAGAAGAGGTGTTCGGC CATTCTCGATTCCTTGACCGGATTTTGCAGCCTTTTACATACAAATATAGCAGTGAAAGACTACGCAACGGCATC GAAAAAGTTGTCCAGAAACATGGGCGTGCAGAAGGTGACCGAGAATGGAAACGGGATATGTTTCCTGCGAACGAG AACAAATGCAAGACTGCTGTGGTTGTCCGGAAAGTCTCGGAGAAGACCTCAAATATAGAGGTCTTTCGTACCTAC GATACAGCTTATCAGCCGGCAACCAATGTCCCCACTCATCTCATAGCGCTGGCAACCGCCTCATCACCACTTTAT TTCCCACCTGTCCTTATAAATGACAATCGCTATCAAGATCCCGCGGTGAGCGGCTTTAACAACCCCTCCTTTATC GCCTTAAAGGAAGCCAGACAGGAGTTCGAACTTTCAGAAAAGAATACAGGAGCCTTCGTGAGTGTTGGGTCCGGC CACCGCGACCCGGATTACAGCTCCTTTGGCAGCATCTCTGTTGGAACCAGCTTTGTGTGGCATCTGGGGGCCCTT GCCAGCAACACACGGCGTTTAATTACAAGAGTTGATCATCAGGACCTCCTAATGCGCTTCGCAAAACATCCAAAT TACTACCGATTCAGCAGCACGCATCTGATCGGGAGTCTCCCACTTGATGATTGGAGGGGGAGAAGGGGTAGCAAA ACACTTGACTATATTACTTATTTGACAAGTGCCTACTTAGGCACGGACGAAGTGAGAGACGCACTGAAGAAATGC GCGAAACGCCTCGTTGAGAGAAGGAGAGAAGAGAAAGCGCTGGTACCGGACCATACGTCAGCCCTCAGTAATGAC CATGATCGTGGGATCATGTATCGCGAACAAGGCAAGCTGGACTATGCAGAGCAGATGTTCAAACAAGCGTTAGCT GGACAAGAAGAAGTGCTGGGATCAGACCATATATCAACCCTCCGCACTGCCAACAATCTCGGGGACTTATATCGC GAACAAGACCAGCTGGATAAAGCAGAGCAGATGTATAGAAAAGTACTAAGTGGAAGAGAGAAAGTCCTGGGACTG GATCATACTTCAACACTTGACACAGTCAACAACCTCGGGAACCTATATCGTGACCAAGGCAGACTAGATGAAGCA GAGCAGATGTACATGCGAGCGATAGCTGGACAAGCGAAAGCGCTGGGACCAGACCACACGTTAACGCTCCGCGCT GTCAACAATCTCGGGGACTTATATCGCGAACAAGGACAGCTGGATAAAGCAGAGAAGATGTATGTGCAAGCGCTA GCTGGACAAGAGACTACGCTGGGACCAGACCATATCCTAACCCTCCGCACTGTCAACAATCTTGGGGTCCTATAT TATGAGCAGGGAAAGCTGGATGAAACAGAGCAGATGTACTTGAGAGTATTAGCTGGATATGAGAAAGTACTGGGA TTTGATCATATGTCAACCCTTCGTATTATTAATAATATCGGGGTCATATACCATGACCAAGGAAAGCTGGATGAA GCGGCGCAGATGTACCAGCGGGCACTAGCAGGCTACGAGAAGGTCCTAGGTCCCTATCACGAAACACATGCATCG TCCCTTGCTATCGTCAACAACCTTGGAAATCTCTACAAAAATCAGGGGAAATTAAAGAAGGCAGAGGAAATGTAC CAGCGAGCACTGGAAGGCTCTGAGAAGGCCCTCGGTCCACATCATACGTCCACTCTGAATGCAGTCAACAACCTT GGAAATCTCTACAAAAATCAGGGGAGGCTGAATGAGGCAGAGGAATTGTACCAGCGAGTACCTGCCTGGCAAGGA GAAGGTTCTCGAGCCGGATCACAGCAGGATGCAGCGACCAAGAGAAGATTAATGGGCTAA |
| Transcript | >Ani_SJS72_1|g9232.t1 ATGCTCGGTCGCTTGAGGATGACAGTAGAGGAAAGCTTAGGCGTGTTCGAGGAGTTCGGAGAAGAGGTGTTCGGC CATTCTCGATTCCTTGACCGGATTTTGCAGCCTTTTACATACAAATATAGCAGTGAAAGACTACGCAACGGCATC GAAAAAGTTGTCCAGAAACATGGGCGTGCAGAAGGTGACCGAGAATGGAAACGGGATATGTTTCCTGCGAACGAG AACAAATGCAAGACTGCTGTGGTTGTCCGGAAAGTCTCGGAGAAGACCTCAAATATAGAGGTCTTTCGTACCTAC GATACAGCTTATCAGCCGGCAACCAATGTCCCCACTCATCTCATAGCGCTGGCAACCGCCTCATCACCACTTTAT TTCCCACCTGTCCTTATAAATGACAATCGCTATCAAGATCCCGCGGTGAGCGGCTTTAACAACCCCTCCTTTATC GCCTTAAAGGAAGCCAGACAGGAGTTCGAACTTTCAGAAAAGAATACAGGAGCCTTCGTGAGTGTTGGGTCCGGC CACCGCGACCCGGATTACAGCTCCTTTGGCAGCATCTCTGTTGGAACCAGCTTTGTGTGGCATCTGGGGGCCCTT GCCAGCAACACACGGCGTTTAATTACAAGAGTTGATCATCAGGACCTCCTAATGCGCTTCGCAAAACATCCAAAT TACTACCGATTCAGCAGCACGCATCTGATCGGGAGTCTCCCACTTGATGATTGGAGGGGGAGAAGGGGTAGCAAA ACACTTGACTATATTACTTATTTGACAAGTGCCTACTTAGGCACGGACGAAGTGAGAGACGCACTGAAGAAATGC GCGAAACGCCTCGTTGAGAGAAGGAGAGAAGAGAAAGCGCTGGTACCGGACCATACGTCAGCCCTCAGTAATGAC CATGATCGTGGGATCATGTATCGCGAACAAGGCAAGCTGGACTATGCAGAGCAGATGTTCAAACAAGCGTTAGCT GGACAAGAAGAAGTGCTGGGATCAGACCATATATCAACCCTCCGCACTGCCAACAATCTCGGGGACTTATATCGC GAACAAGACCAGCTGGATAAAGCAGAGCAGATGTATAGAAAAGTACTAAGTGGAAGAGAGAAAGTCCTGGGACTG GATCATACTTCAACACTTGACACAGTCAACAACCTCGGGAACCTATATCGTGACCAAGGCAGACTAGATGAAGCA GAGCAGATGTACATGCGAGCGATAGCTGGACAAGCGAAAGCGCTGGGACCAGACCACACGTTAACGCTCCGCGCT GTCAACAATCTCGGGGACTTATATCGCGAACAAGGACAGCTGGATAAAGCAGAGAAGATGTATGTGCAAGCGCTA GCTGGACAAGAGACTACGCTGGGACCAGACCATATCCTAACCCTCCGCACTGTCAACAATCTTGGGGTCCTATAT TATGAGCAGGGAAAGCTGGATGAAACAGAGCAGATGTACTTGAGAGTATTAGCTGGATATGAGAAAGTACTGGGA TTTGATCATATGTCAACCCTTCGTATTATTAATAATATCGGGGTCATATACCATGACCAAGGAAAGCTGGATGAA GCGGCGCAGATGTACCAGCGGGCACTAGCAGGCTACGAGAAGGTCCTAGGTCCCTATCACGAAACACATGCATCG TCCCTTGCTATCGTCAACAACCTTGGAAATCTCTACAAAAATCAGGGGAAATTAAAGAAGGCAGAGGAAATGTAC CAGCGAGCACTGGAAGGCTCTGAGAAGGCCCTCGGTCCACATCATACGTCCACTCTGAATGCAGTCAACAACCTT GGAAATCTCTACAAAAATCAGGGGAGGCTGAATGAGGCAGAGGAATTGTACCAGCGAGTACCTGCCTGGCAAGGA GAAGGTTCTCGAGCCGGATCACAGCAGGATGCAGCGACCAAGAGAAGATTAATGGGCTAA |
| Gene | >Ani_SJS72_1|g9232.t1 ATGCTCGGTCGCTTGAGGATGACAGTAGAGGAAAGCTTAGGCGTGTTCGAGGAGTTCGGAGAAGAGGTGTTCGGC CATTCTCGATTCCTTGACCGGATTTTGCAGCCTTTTACATACAAATATAGCAGTGAAAGACTACGCAACGGCATC GAAAAAGTTGTCCAGAAACATGGGCGTGCAGAAGGTGACCGAGAATGGAAACGGGATATGTTTCCTGCGAACGAG AACAAATGCAAGACGTAAGTTAGCTCATTTCGTTGAAGATCATTTCCCTAATACTAGAACCAGTGCTGTGGTTGT CCGGAAAGTCTCGGAGAAGACCTCAAATATAGAGGTCTTTCGTACCTACGATACAGCTTATCAGCCGGCAACCAA TGTCCCCACTCATCTCATAGCGCTGGCAACCGCCTCATCACCACTTTATTTCCCACCTGTCCTTATAAATGACAA TCGCTATCAAGATCCCGCGGTGAGCGGCTTTAACAACCCCTCCTTTATCGCCTTAAAGGAAGCCAGACAGGAGTT CGAACTTTCAGAAAAGAATACAGGAGCCTTCGTGAGTGTTGGGTCCGGCCACCGCGACCCGGATTACAGCTCCTT TGGCAGCATCTCTGTTGGAACCAGCTTTGTGTGGCATCTGGGGGCCCTTGCCAGCAACACACGGCGTTTAATTAC AAGAGTTGATCATCAGGACCTCCTAATGCGCTTCGCAAAACATCCAAATTACTACCGATTCAGCAGCACGCATCT GATCGGGAGTCTCCCACTTGATGATTGGAGGGGGAGAAGGGGTAGCAAAACACTTGACTATATTACTTATTTGAC AAGTGCCTACTTAGGCACGGACGAAGTGAGAGACGCACTGAAGAAATGCGCGAAACGCCTCGTTGAGAGAAGGAG AGAAGAGAAAGCGCTGGTACCGGACCATACGTCAGCCCTCAGTAATGACCATGATCGTGGGATCATGTATCGCGA ACAAGGCAAGCTGGACTATGCAGAGCAGATGTTCAAACAAGCGTTAGCTGGACAAGAAGAAGTGCTGGGATCAGA CCATATATCAACCCTCCGCACTGCCAACAATCTCGGGGACTTATATCGCGAACAAGACCAGCTGGATAAAGCAGA GCAGATGTATAGAAAAGTACTAAGTGGAAGAGAGAAAGTCCTGGGACTGGATCATACTTCAACACTTGACACAGT CAACAACCTCGGGAACCTATATCGTGACCAAGGCAGACTAGATGAAGCAGAGCAGATGTACATGCGAGCGATAGC TGGACAAGCGAAAGCGCTGGGACCAGACCACACGTTAACGCTCCGCGCTGTCAACAATCTCGGGGACTTATATCG CGAACAAGGACAGCTGGATAAAGCAGAGAAGATGTATGTGCAAGCGCTAGCTGGACAAGAGACTACGCTGGGACC AGACCATATCCTAACCCTCCGCACTGTCAACAATCTTGGGGTCCTATATTATGAGCAGGGAAAGCTGGATGAAAC AGAGCAGATGTACTTGAGAGTATTAGCTGGATATGAGAAAGTACTGGGATTTGATCATATGTCAACCCTTCGTAT TATTAATAATATCGGGGTCATATACCATGACCAAGGAAAGCTGGATGAAGCGGCGCAGATGTACCAGCGGGCACT AGCAGGCTACGAGAAGGTCCTAGGTCCCTATCACGAAACACATGCATCGTCCCTTGCTATCGTCAACAACCTTGG AAATCTCTACAAAAATCAGGGGAAATTAAAGAAGGCAGAGGAAATGTACCAGCGAGCACTGGAAGGCTCTGAGAA GGCCCTCGGTCCACATCATACGTCCACTCTGAATGCAGTCAACAACCTTGGAAATCTCTACAAAAATCAGGGGAG GCTGAATGAGGCAGAGGAATTGTACCAGCGAGTACCTGCCTGGCAAGGAGAAGGTTCTCGAGCCGGATCACAGCA GGATGCAGCGACCAAGAGAAGATTAATGGGCTAA |