Protein ID | Ani_SJS72_1|g921.t1 |
Gene name | |
Location | scaffold_004:321142..322037 |
Strand | - |
Gene length (bp) | 895 |
Transcript length (bp) | 822 |
Coding sequence length (bp) | 822 |
Protein length (aa) | 274 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF14523 | Syntaxin_2 | Syntaxin-like protein | 9.2E-26 | 37 | 134 |
PF05739 | SNARE | SNARE domain | 6.2E-13 | 216 | 267 |
GO Term | Description | Terminal node |
---|---|---|
GO:0016020 | membrane | Yes |
GO:0110165 | cellular anatomical entity | No |
GO:0005575 | cellular_component | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 36 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 253 | 272 | 19 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS72_1|g921.t1 MSFDRLNSLEAQPTTFRRSDDPQYRDDPEFHRLTEGLSNQLFTLTSNITRLSDQIALLGTRRDTERVRERVHKLL EDTRGGFRDVAEGIKKVQTWEDVSPSQKWTQQKLSSEFKSTLEEFQTVQRRALEKQRASAAAARTAVDEAEPGSG GDHQPQQQQDQLLEEQPRLANQDEVDFQEALIIEREAEIRNIEQSVGELNELFRDVAHIVHEQGGQLDIISENVE RVGDDTRGANVELRSASRYQKNARNKACCLLVIFAVILTIIVLAATLG* |
Coding | >Ani_SJS72_1|g921.t1 ATGTCGTTTGATCGCTTGAACTCGCTAGAGGCACAGCCTACAACTTTCCGTCGCTCCGACGATCCCCAGTATCGC GATGACCCCGAATTCCATCGTTTGACCGAGGGTCTCTCCAACCAACTGTTTACCCTGACCTCCAACATCACTCGG TTATCCGATCAGATTGCCCTTCTGGGAACGAGGCGAGACACTGAGCGTGTGCGCGAGAGAGTCCACAAGCTCCTG GAGGATACTCGGGGGGGTTTCAGGGATGTCGCAGAAGGGATTAAGAAGGTCCAGACATGGGAGGATGTCAGCCCT TCCCAAAAATGGACTCAGCAGAAGCTATCGTCCGAATTTAAATCTACCCTAGAAGAGTTCCAGACTGTTCAGCGT CGTGCCTTGGAGAAGCAACGGGCATCCGCAGCAGCAGCTCGGACTGCCGTAGACGAAGCGGAGCCTGGTTCCGGA GGTGACCATCAGCCGCAGCAACAGCAAGACCAATTGTTGGAGGAACAGCCCCGCCTTGCGAATCAGGACGAAGTG GACTTCCAGGAGGCCCTCATTATCGAGCGCGAGGCTGAGATCCGCAACATTGAGCAGAGCGTTGGCGAACTCAAT GAACTGTTCCGGGACGTGGCTCACATTGTCCATGAGCAAGGTGGACAGCTTGATATTATCAGCGAGAACGTTGAA CGAGTTGGCGATGACACTCGTGGAGCAAACGTCGAGCTCCGTAGCGCCAGCCGGTACCAGAAGAATGCGCGCAAC AAGGCTTGCTGTCTGCTTGTCATTTTTGCTGTTATCCTTACCATCATCGTCCTGGCGGCAACCCTGGGATAG |
Transcript | >Ani_SJS72_1|g921.t1 ATGTCGTTTGATCGCTTGAACTCGCTAGAGGCACAGCCTACAACTTTCCGTCGCTCCGACGATCCCCAGTATCGC GATGACCCCGAATTCCATCGTTTGACCGAGGGTCTCTCCAACCAACTGTTTACCCTGACCTCCAACATCACTCGG TTATCCGATCAGATTGCCCTTCTGGGAACGAGGCGAGACACTGAGCGTGTGCGCGAGAGAGTCCACAAGCTCCTG GAGGATACTCGGGGGGGTTTCAGGGATGTCGCAGAAGGGATTAAGAAGGTCCAGACATGGGAGGATGTCAGCCCT TCCCAAAAATGGACTCAGCAGAAGCTATCGTCCGAATTTAAATCTACCCTAGAAGAGTTCCAGACTGTTCAGCGT CGTGCCTTGGAGAAGCAACGGGCATCCGCAGCAGCAGCTCGGACTGCCGTAGACGAAGCGGAGCCTGGTTCCGGA GGTGACCATCAGCCGCAGCAACAGCAAGACCAATTGTTGGAGGAACAGCCCCGCCTTGCGAATCAGGACGAAGTG GACTTCCAGGAGGCCCTCATTATCGAGCGCGAGGCTGAGATCCGCAACATTGAGCAGAGCGTTGGCGAACTCAAT GAACTGTTCCGGGACGTGGCTCACATTGTCCATGAGCAAGGTGGACAGCTTGATATTATCAGCGAGAACGTTGAA CGAGTTGGCGATGACACTCGTGGAGCAAACGTCGAGCTCCGTAGCGCCAGCCGGTACCAGAAGAATGCGCGCAAC AAGGCTTGCTGTCTGCTTGTCATTTTTGCTGTTATCCTTACCATCATCGTCCTGGCGGCAACCCTGGGATAG |
Gene | >Ani_SJS72_1|g921.t1 ATGTCGTTTGATCGCTTGAACTCGCTAGAGGCACAGCCTACAACTTTCCGTCGCTCCGACGATCCCCAGTATCGC GATGACCCCGAATTCCATCGTTTGACCGAGGGTCTCTCCAACCAACTGTTTACCCTGACCTCCAACATCACTCGG TTATCCGATCAGATTGCCCTTCTGGGAACGAGGCGAGACACTGAGCGTGTGCGCGAGAGAGTCCACAAGCTCCTG GAGGATACTCGGGGGGGTTTCAGGGATGTCGCAGAAGGGATTAAGAAGGTCCAGACATGGGAGGATGTCAGCGTA TGTTACGCCCATATATAACCCCCCCACTGCGCTGCGACCGAACAAGCAATATTAATGTATTTCTCACCAGCCTTC CCAAAAATGGACTCAGCAGAAGCTATCGTCCGAATTTAAATCTACCCTAGAAGAGTTCCAGACTGTTCAGCGTCG TGCCTTGGAGAAGCAACGGGCATCCGCAGCAGCAGCTCGGACTGCCGTAGACGAAGCGGAGCCTGGTTCCGGAGG TGACCATCAGCCGCAGCAACAGCAAGACCAATTGTTGGAGGAACAGCCCCGCCTTGCGAATCAGGACGAAGTGGA CTTCCAGGAGGCCCTCATTATCGAGCGCGAGGCTGAGATCCGCAACATTGAGCAGAGCGTTGGCGAACTCAATGA ACTGTTCCGGGACGTGGCTCACATTGTCCATGAGCAAGGTGGACAGCTTGATATTATCAGCGAGAACGTTGAACG AGTTGGCGATGACACTCGTGGAGCAAACGTCGAGCTCCGTAGCGCCAGCCGGTACCAGAAGAATGCGCGCAACAA GGCTTGCTGTCTGCTTGTCATTTTTGCTGTTATCCTTACCATCATCGTCCTGGCGGCAACCCTGGGATAG |