© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g9205.t1 |
| Gene name | |
| Location | scaffold_096:3161..4183 |
| Strand | + |
| Gene length (bp) | 1022 |
| Transcript length (bp) | 780 |
| Coding sequence length (bp) | 780 |
| Protein length (aa) | 260 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00106 | adh_short | short chain dehydrogenase | 1.8E-42 | 6 | 195 |
| PF13561 | adh_short_C2 | Enoyl-(Acyl carrier protein) reductase | 1.6E-24 | 12 | 198 |
| PF08659 | KR | KR domain | 1.7E-07 | 9 | 173 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 23 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g9205.t1 MSFPYKHILVLGATAGIGRALASRFVQSEVKVTVVGRRKERLDEFLQEHGEDKANAVQFDISDLDKIPGFAAEIM TTYPTIDSVFMNAGIMLPTDMTDPEKFDLPSFYKQMHVNFTSYVALTHAFLPYLTKEGGHTSLIYTTSNLSIVPA TWMPAYSASKAALNAFILCLRDQLRKSSVKIIEVSPPAVQSELHDYMGEEGRKVGMPLKEFTAEAFQGLLDGKDQ IVVGSLGPAEVFLDIVNKRRAATTQLAKMMRGEK* |
| Coding | >Ani_SJS72_1|g9205.t1 ATGTCCTTCCCATACAAGCACATCCTCGTCCTCGGCGCCACCGCCGGCATCGGCCGAGCTCTCGCATCGCGCTTC GTGCAATCCGAAGTCAAAGTCACAGTCGTCGGACGACGCAAAGAGCGCTTGGATGAATTCTTGCAAGAACACGGA GAAGACAAGGCCAATGCGGTGCAATTCGATATTAGTGACTTGGATAAGATTCCTGGGTTTGCTGCTGAAATAATG ACCACATACCCCACAATCGACAGCGTCTTTATGAACGCCGGCATAATGCTTCCTACCGACATGACCGATCCCGAA AAATTCGACCTACCCAGCTTCTACAAGCAAATGCACGTCAACTTCACCAGTTATGTTGCTCTGACGCATGCTTTC TTGCCTTATCTTACCAAGGAAGGGGGCCATACGAGCTTGATTTACACCACATCCAACCTCTCCATAGTCCCTGCG ACCTGGATGCCCGCATACTCTGCCTCCAAGGCTGCCCTGAACGCCTTCATTCTCTGTCTGCGGGATCAGCTGCGT AAAAGCTCTGTGAAGATTATTGAGGTGTCGCCGCCAGCGGTGCAATCCGAACTCCACGATTATATGGGCGAAGAG GGCCGTAAAGTCGGTATGCCCCTGAAGGAATTTACGGCTGAAGCATTTCAGGGACTACTGGACGGAAAGGACCAA ATCGTTGTGGGAAGTCTTGGGCCTGCAGAAGTGTTCTTGGATATCGTGAATAAGCGCCGGGCTGCGACTACGCAG TTGGCGAAGATGATGAGGGGGGAGAAGTAG |
| Transcript | >Ani_SJS72_1|g9205.t1 ATGTCCTTCCCATACAAGCACATCCTCGTCCTCGGCGCCACCGCCGGCATCGGCCGAGCTCTCGCATCGCGCTTC GTGCAATCCGAAGTCAAAGTCACAGTCGTCGGACGACGCAAAGAGCGCTTGGATGAATTCTTGCAAGAACACGGA GAAGACAAGGCCAATGCGGTGCAATTCGATATTAGTGACTTGGATAAGATTCCTGGGTTTGCTGCTGAAATAATG ACCACATACCCCACAATCGACAGCGTCTTTATGAACGCCGGCATAATGCTTCCTACCGACATGACCGATCCCGAA AAATTCGACCTACCCAGCTTCTACAAGCAAATGCACGTCAACTTCACCAGTTATGTTGCTCTGACGCATGCTTTC TTGCCTTATCTTACCAAGGAAGGGGGCCATACGAGCTTGATTTACACCACATCCAACCTCTCCATAGTCCCTGCG ACCTGGATGCCCGCATACTCTGCCTCCAAGGCTGCCCTGAACGCCTTCATTCTCTGTCTGCGGGATCAGCTGCGT AAAAGCTCTGTGAAGATTATTGAGGTGTCGCCGCCAGCGGTGCAATCCGAACTCCACGATTATATGGGCGAAGAG GGCCGTAAAGTCGGTATGCCCCTGAAGGAATTTACGGCTGAAGCATTTCAGGGACTACTGGACGGAAAGGACCAA ATCGTTGTGGGAAGTCTTGGGCCTGCAGAAGTGTTCTTGGATATCGTGAATAAGCGCCGGGCTGCGACTACGCAG TTGGCGAAGATGATGAGGGGGGAGAAGTAG |
| Gene | >Ani_SJS72_1|g9205.t1 ATGTCCTTCCCATACAAGCACATCCTCGTCCTCGGCGCCACCGCCGGCATCGGCCGAGCTCTCGCATCGCGCTTC GTGCAATCCGAAGTCAAAGTCACAGTCGTCGGACGACGCAAAGAGCGCTTGGATGAATTCTTGCAAGAACACGGA GAAGACAAGGCCAATGCGGTGCAATTCGATATTAGTGACTTGGATAAGATTCCTGGGTTTGCTGCTGAGTAAGTT TCGCTCCCTTGATATACTATGCAGTACCGCATCTAGATTGAATGGATGGCTAATGAGAATATCTTCAATAGAATA ATGACCACATACCCCACAATCGACAGCGTCTTTATGAACGCCGGCATAATGCTTCCTACCGACATGACCGATCCC GAAAAATTCGACCTACCCAGCTTCTACAAGCAAATGCACGTCAACTTCACCAGTTATGTTGCTCTGACGCATGCT TTCTTGCCTTATCTTACCAAGGAAGGGGGCCATACGAGCTTGATTTAGTGCGTACCTCTTCATCTCTTTCAGGTT ACACTACCAGAATGCACTAAAATGTACTAACCATAAAACAGCACCACATCCAACCTCTCCATAGTCCCTGCGACC TGGATGCCCGCATACTCTGCCTCCAAGGCTGCCCTGAACGCCTTCATTCTCTGTCTGCGGGATCAGCTGCGTAAA AGCTCTGTGAAGATTATTGAGGTGTCGCCGCCAGCGGTGCAATGTGAGTCTAAACCCCCAATTCTCTGCTTCTAC TGCCGTCTCGTTCATCTAGTTGTCCTAGATATATATTTCCTATCTGACTAACTATCACTGCAGCCGAACTCCACG ATTATATGGGCGAAGAGGGCCGTAAAGTCGGTATGCCCCTGAAGGAATTTACGGCTGAAGCATTTCAGGGACTAC TGGACGGAAAGGACCAAATCGTTGTGGGAAGTCTTGGGCCTGCAGAAGTGTTCTTGGATATCGTGAATAAGCGCC GGGCTGCGACTACGCAGTTGGCGAAGATGATGAGGGGGGAGAAGTAG |