© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS72_1|g9174.t1 |
| Gene name | |
| Location | scaffold_095:43421..45268 |
| Strand | + |
| Gene length (bp) | 1847 |
| Transcript length (bp) | 1677 |
| Coding sequence length (bp) | 1677 |
| Protein length (aa) | 559 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00083 | Sugar_tr | Sugar (and other) transporter | 1.5E-130 | 50 | 506 |
| PF07690 | MFS_1 | Major Facilitator Superfamily | 7.3E-12 | 55 | 350 |
| PF07690 | MFS_1 | Major Facilitator Superfamily | 9.4E-10 | 354 | 491 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0009987 | cellular process | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005215 | transporter activity | No |
| GO:0005575 | cellular_component | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0003674 | molecular_function | No |
| GO:0006810 | transport | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 70 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 40 | 62 | 22 |
| 2 | 95 | 117 | 22 |
| 3 | 124 | 141 | 17 |
| 4 | 151 | 170 | 19 |
| 5 | 183 | 205 | 22 |
| 6 | 215 | 237 | 22 |
| 7 | 305 | 324 | 19 |
| 8 | 339 | 361 | 22 |
| 9 | 370 | 392 | 22 |
| 10 | 407 | 429 | 22 |
| 11 | 450 | 468 | 18 |
| 12 | 473 | 492 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g9174.t1 MPRKRPQDELNGDVLQQEAQATGPNGQKSEEGIVDTPIPLLTWRSFLMGIFVSMGGFLFGYDTGQISGFLEMPNF LQRYGQQQADGTYYFSNARSGLIVALLSIGTLIGALIAAPIADRVGRKWSISGWSAMVCVGITIQISSPFGKWYQ VAMGRWVAGLGVGALSLLVPMYQAETGPRHIRGSLVSTYQLFITLGIFVANCINFGTEARNDTGSWRIPMGITYI WAMILGFGIALFPESARYDYRHGREAKAARTLSRMYGIPENHRMLKLEIGEIRQKFVEEQERGEITWSHLFHAPR MKYRVAVGVALQALQQLTGANYFFYYGTTIFRGAGISNSYVTQMILGGVNFGTTFLGLYLIENYGRRRSLITGAL WMFVCFMVFASVGHFSLDHENPERTHTAGVVMVVFACLFILGFASTWGPMVWTIIAELYPSEFRARAMSLATASN WLWNFLLAFFTPFITSAIDFRLGYVFAGCLFLAAGLVYVAVIEGRGRTLEEIDTMYVMKVPPWKSSKYVFPDIDP YDRRGSILSKAGASHIPQVSGGNETLSPHTTEV* |
| Coding | >Ani_SJS72_1|g9174.t1 ATGCCTCGTAAGAGGCCGCAAGATGAACTCAATGGTGATGTGCTGCAGCAAGAGGCGCAAGCTACCGGCCCCAAT GGCCAGAAATCTGAAGAGGGGATTGTGGATACACCTATCCCTCTGCTCACGTGGCGTTCTTTCTTAATGGGCATT TTCGTGTCAATGGGTGGTTTCCTCTTCGGCTACGACACTGGCCAAATTTCAGGCTTCTTGGAGATGCCGAACTTT CTCCAAAGATACGGACAACAGCAAGCTGACGGAACATACTATTTCTCCAATGCCCGTTCGGGTCTGATTGTCGCG CTGCTTTCAATAGGTACCTTGATCGGCGCCCTTATTGCAGCTCCCATCGCAGATCGTGTTGGCCGGAAATGGTCC ATCAGCGGCTGGAGTGCCATGGTGTGTGTCGGTATCACCATACAAATATCTTCCCCTTTCGGAAAGTGGTACCAG GTAGCCATGGGTCGTTGGGTCGCTGGTCTCGGCGTTGGGGCTCTATCATTGCTTGTTCCCATGTACCAAGCGGAA ACTGGACCGAGGCACATTCGTGGATCTCTTGTTAGCACTTATCAGCTTTTCATCACCCTTGGAATCTTCGTCGCC AACTGTATCAACTTCGGAACAGAAGCTCGAAATGATACAGGCTCCTGGCGTATTCCCATGGGCATCACCTACATC TGGGCCATGATCCTGGGCTTCGGAATTGCACTATTCCCCGAAAGTGCCCGGTACGACTATAGACATGGAAGGGAG GCGAAAGCAGCTCGTACCCTATCGAGAATGTACGGGATTCCTGAAAACCACCGTATGCTGAAGCTCGAGATCGGC GAGATCAGGCAGAAGTTCGTGGAAGAACAGGAACGCGGAGAGATAACCTGGTCTCATCTTTTCCATGCACCCCGC ATGAAGTATCGCGTCGCAGTGGGAGTCGCCCTTCAAGCACTGCAACAGTTAACGGGAGCGAATTACTTTTTCTAC TACGGGACGACGATCTTTCGAGGCGCCGGGATTTCAAATTCCTACGTAACACAAATGATTCTTGGCGGTGTGAAT TTCGGAACGACGTTCCTAGGGCTGTACCTGATCGAGAACTACGGTCGTCGTCGATCCCTGATAACTGGAGCATTG TGGATGTTTGTTTGTTTCATGGTTTTCGCCTCCGTGGGCCATTTCTCTCTAGACCATGAAAACCCAGAACGGACA CACACAGCTGGCGTGGTCATGGTTGTTTTCGCCTGTCTTTTCATTCTCGGTTTCGCATCAACATGGGGTCCCATG GTGTGGACCATTATCGCAGAGCTGTATCCCTCCGAATTCCGTGCCCGCGCCATGTCTCTCGCCACAGCATCCAAT TGGCTCTGGAACTTCCTTCTCGCCTTTTTCACCCCCTTCATCACCAGTGCCATTGACTTCCGCCTCGGCTACGTC TTTGCCGGCTGCCTCTTCCTTGCGGCGGGCCTGGTTTACGTGGCAGTCATTGAAGGTCGTGGCCGTACATTGGAA GAGATCGATACCATGTACGTTATGAAGGTGCCGCCCTGGAAGAGCTCCAAGTATGTATTTCCGGACATCGATCCA TATGATCGTCGCGGTTCGATTTTATCGAAAGCAGGGGCATCTCATATTCCGCAGGTGAGCGGTGGAAACGAGACG CTCAGCCCCCACACAACTGAGGTGTAA |
| Transcript | >Ani_SJS72_1|g9174.t1 ATGCCTCGTAAGAGGCCGCAAGATGAACTCAATGGTGATGTGCTGCAGCAAGAGGCGCAAGCTACCGGCCCCAAT GGCCAGAAATCTGAAGAGGGGATTGTGGATACACCTATCCCTCTGCTCACGTGGCGTTCTTTCTTAATGGGCATT TTCGTGTCAATGGGTGGTTTCCTCTTCGGCTACGACACTGGCCAAATTTCAGGCTTCTTGGAGATGCCGAACTTT CTCCAAAGATACGGACAACAGCAAGCTGACGGAACATACTATTTCTCCAATGCCCGTTCGGGTCTGATTGTCGCG CTGCTTTCAATAGGTACCTTGATCGGCGCCCTTATTGCAGCTCCCATCGCAGATCGTGTTGGCCGGAAATGGTCC ATCAGCGGCTGGAGTGCCATGGTGTGTGTCGGTATCACCATACAAATATCTTCCCCTTTCGGAAAGTGGTACCAG GTAGCCATGGGTCGTTGGGTCGCTGGTCTCGGCGTTGGGGCTCTATCATTGCTTGTTCCCATGTACCAAGCGGAA ACTGGACCGAGGCACATTCGTGGATCTCTTGTTAGCACTTATCAGCTTTTCATCACCCTTGGAATCTTCGTCGCC AACTGTATCAACTTCGGAACAGAAGCTCGAAATGATACAGGCTCCTGGCGTATTCCCATGGGCATCACCTACATC TGGGCCATGATCCTGGGCTTCGGAATTGCACTATTCCCCGAAAGTGCCCGGTACGACTATAGACATGGAAGGGAG GCGAAAGCAGCTCGTACCCTATCGAGAATGTACGGGATTCCTGAAAACCACCGTATGCTGAAGCTCGAGATCGGC GAGATCAGGCAGAAGTTCGTGGAAGAACAGGAACGCGGAGAGATAACCTGGTCTCATCTTTTCCATGCACCCCGC ATGAAGTATCGCGTCGCAGTGGGAGTCGCCCTTCAAGCACTGCAACAGTTAACGGGAGCGAATTACTTTTTCTAC TACGGGACGACGATCTTTCGAGGCGCCGGGATTTCAAATTCCTACGTAACACAAATGATTCTTGGCGGTGTGAAT TTCGGAACGACGTTCCTAGGGCTGTACCTGATCGAGAACTACGGTCGTCGTCGATCCCTGATAACTGGAGCATTG TGGATGTTTGTTTGTTTCATGGTTTTCGCCTCCGTGGGCCATTTCTCTCTAGACCATGAAAACCCAGAACGGACA CACACAGCTGGCGTGGTCATGGTTGTTTTCGCCTGTCTTTTCATTCTCGGTTTCGCATCAACATGGGGTCCCATG GTGTGGACCATTATCGCAGAGCTGTATCCCTCCGAATTCCGTGCCCGCGCCATGTCTCTCGCCACAGCATCCAAT TGGCTCTGGAACTTCCTTCTCGCCTTTTTCACCCCCTTCATCACCAGTGCCATTGACTTCCGCCTCGGCTACGTC TTTGCCGGCTGCCTCTTCCTTGCGGCGGGCCTGGTTTACGTGGCAGTCATTGAAGGTCGTGGCCGTACATTGGAA GAGATCGATACCATGTACGTTATGAAGGTGCCGCCCTGGAAGAGCTCCAAGTATGTATTTCCGGACATCGATCCA TATGATCGTCGCGGTTCGATTTTATCGAAAGCAGGGGCATCTCATATTCCGCAGGTGAGCGGTGGAAACGAGACG CTCAGCCCCCACACAACTGAGGTGTAA |
| Gene | >Ani_SJS72_1|g9174.t1 ATGCCTCGTAAGAGGCCGCAAGATGAACTCAATGGTGATGTGCTGCAGCAAGAGGCGCAAGCTACCGGCCCCAAT GGCCAGAAATCTGAAGAGGGGATTGTGGATACACCTATCCCTCTGCTCACGTGGCGTTCTTTCTTAATGGGCATT TTCGTGTCAATGGGTGGTTTCCTCTTCGGCTACGACACTGGCCAAATTTCAGGCTTCTTGGAGATGCCGAACTTT CTCCAAAGATACGGACAACAGCAAGCTGACGGAACATACTATTTCTCCAATGCCCGTTCGGGTCTGATTGTCGCG CTGGTAAGACACGCATGGACAATTTGACACTAGCTCAATCTTGCTGATAAGCGCAGCTTTCAATAGGTACCTTGA TCGGCGCCCTTATTGCAGCTCCCATCGCAGATCGTGTTGGCCGGAAATGGTCCATCAGCGGCTGGAGTGCCATGG TGTGTGTCGGTATCACCATACAAATATCTTCCCCTTTCGGAAAGTGGTACCAGGTAGCCATGGGTCGTTGGGTCG CTGGTCTCGGCGTTGGGGCTCTATCATTGCTTGTTCCCATGTACCAAGCGGAAACTGGACCGAGGCACATTCGTG GATCTCTTGTTAGGTATGCCTACAAACCTGCATTGTTCTTGATTGGAAGCTTACGTCAACAGCACTTATCAGCTT TTCATCACCCTTGGAATCTTCGTCGCCAACTGTATCAACTTCGGAACAGAAGCTCGAAATGATACAGGCTCCTGG CGTATTCCCATGGGCATCACCTACATCTGGGCCATGATCCTGGGCTTCGGAATTGCACTATTCCCCGAAAGTGCC CGGTACGACTATAGACATGGAAGGGAGGCGAAAGCAGCTCGTACCCTATCGAGAATGTACGGGATTCCTGAAAAC CACCGTATGCTGAAGCTCGAGATCGGCGAGATCAGGCAGAAGTTCGTGGAAGAACAGGAACGCGGAGAGATAACC TGGTCTCATCTTTTCCATGCACCCCGCATGAAGTATCGCGTCGCAGTGGGAGTCGCCCTTCAAGCACTGCAACAG TTAACGGGAGCGAATTACTTTTTCTACTACGGGACGACGATCTTTCGAGGCGCCGGGATTTCAAATTCCTACGTA ACACAAATGATTCTTGGCGGTGTGAATTTCGGAACGACGTTCCTAGGGCTGTACCTGATCGAGAACTACGGTCGT CGTCGATCCCTGATAACTGGAGCATTGTGGATGTTTGTTTGTTTCATGGTTTTCGCCTCCGTGGGCCATTTCTCT CTAGACCATGAAAACCCAGAACGGACACACACAGCTGGCGTGGTCATGGTTGTTTTCGCCTGTCTTTTCATTCTC GGTATGTCAGCCGTTGCACATCCCCATTCTAATCCAAATACGTAGTCCCACTTGCTAACCGCCACAAAGGTTTCG CATCAACATGGGGTCCCATGGTGTGGACCATTATCGCAGAGCTGTATCCCTCCGAATTCCGTGCCCGCGCCATGT CTCTCGCCACAGCATCCAATTGGCTCTGGAACTTCCTTCTCGCCTTTTTCACCCCCTTCATCACCAGTGCCATTG ACTTCCGCCTCGGCTACGTCTTTGCCGGCTGCCTCTTCCTTGCGGCGGGCCTGGTTTACGTGGCAGTCATTGAAG GTCGTGGCCGTACATTGGAAGAGATCGATACCATGTACGTTATGAAGGTGCCGCCCTGGAAGAGCTCCAAGTATG TATTTCCGGACATCGATCCATATGATCGTCGCGGTTCGATTTTATCGAAAGCAGGGGCATCTCATATTCCGCAGG TGAGCGGTGGAAACGAGACGCTCAGCCCCCACACAACTGAGGTGTAA |