© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g9147.t1 |
| Gene name | |
| Location | scaffold_094:86109..87628 |
| Strand | + |
| Gene length (bp) | 1519 |
| Transcript length (bp) | 1458 |
| Coding sequence length (bp) | 1458 |
| Protein length (aa) | 486 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07732 | Cu-oxidase_3 | Multicopper oxidase | 1.4E-38 | 28 | 142 |
| PF00394 | Cu-oxidase | Multicopper oxidase | 1.1E-26 | 151 | 308 |
| PF07731 | Cu-oxidase_2 | Multicopper oxidase | 9.3E-21 | 374 | 480 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0005507 | copper ion binding | Yes |
| GO:0016491 | oxidoreductase activity | Yes |
| GO:0003824 | catalytic activity | No |
| GO:0046914 | transition metal ion binding | No |
| GO:0003674 | molecular_function | No |
| GO:0043169 | cation binding | No |
| GO:0043167 | ion binding | No |
| GO:0005488 | binding | No |
| GO:0046872 | metal ion binding | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 20 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g9147.t1 MIRTLITLGLYGFVQQVSSKDVYLDWNITWVTAAPDGYARPVIGINGHWPCPQIDVDVGDNLIVDVYNGLGNEST GIHWHGLHQNYNGYMDGVPGVTQCELHPNQRMRYIVPINQTGTYWYHSHEPGQYPDGLRGPIIVHDNVPAPYHYD EEMTLTLSDWYHVQIPVLLDEFIVPSDHAPYGGQEPLPDAVLFNDMHNTKISVKPGTTYLIHVVCMGNFPGHALV IDDHDMTIVGMDGIAVEPHFLPPQYLRVAVGQRVDILLTTKNDTSKNYAIWDGLDIDEMFVQEGRSPPQGYNPNG TAWLMYNEDAPLPPPPVIHVNNASLDFLDDVTLTPRDHLPLIDPIQHQFIFDVYPTTVDGKPAYSINNMTYNAPD SPTLYTAIYSDPEACMDPDLYGDVNPFVVNYGDVVEIVLNNHHDNLHPWHLHGHDFQVLQRTYPYGGFFDGYRNV SATPMRRDTLMVEPLGHFVIRFRAMNPDKYSLAAD* |
| Coding | >Ani_SJS72_1|g9147.t1 ATGATCCGAACCCTCATCACGCTCGGCCTGTACGGGTTCGTCCAACAGGTATCGAGCAAAGATGTGTACCTGGAT TGGAATATAACTTGGGTGACTGCAGCACCGGATGGGTATGCGAGGCCTGTGATCGGCATCAATGGACACTGGCCT TGTCCTCAGATCGACGTCGATGTTGGCGATAACCTCATCGTCGACGTGTACAACGGGCTGGGTAACGAGTCCACC GGAATCCATTGGCATGGTCTCCATCAGAACTACAATGGGTACATGGACGGTGTCCCAGGAGTCACTCAATGCGAG CTCCACCCCAACCAGCGGATGCGCTACATTGTTCCGATCAACCAAACCGGCACATATTGGTACCACTCCCACGAG CCCGGTCAATATCCTGATGGGTTGCGCGGACCCATCATCGTGCACGATAATGTTCCTGCGCCGTATCACTATGAC GAGGAAATGACTCTCACTCTATCAGACTGGTATCATGTACAAATACCTGTCTTGCTCGATGAATTCATTGTTCCA TCGGACCATGCCCCCTATGGCGGTCAAGAGCCACTGCCTGATGCGGTTTTGTTCAATGACATGCATAACACCAAG ATCAGCGTCAAGCCCGGCACGACCTACCTGATCCACGTTGTTTGCATGGGAAACTTCCCCGGCCATGCACTCGTC ATTGACGACCACGACATGACCATTGTTGGTATGGATGGCATTGCAGTGGAACCGCATTTTCTTCCACCCCAGTAT CTGCGTGTGGCCGTTGGGCAACGAGTCGACATCCTCCTCACCACCAAAAACGATACTAGCAAGAACTATGCGATC TGGGACGGCCTCGATATTGACGAAATGTTTGTTCAAGAGGGAAGGAGCCCACCTCAAGGGTACAATCCCAACGGC ACCGCATGGCTCATGTACAATGAAGATGCTCCTTTGCCTCCTCCACCAGTGATTCATGTCAACAATGCAAGTCTG GACTTCCTCGACGATGTGACCTTGACACCGAGAGACCATCTTCCGTTGATCGACCCAATACAACACCAATTCATC TTCGATGTCTACCCAACCACAGTGGATGGAAAGCCCGCCTACAGCATCAACAATATGACATATAACGCTCCCGAC TCTCCCACGCTGTATACTGCCATTTATTCTGACCCTGAGGCTTGCATGGACCCGGACCTTTATGGGGATGTGAAC CCTTTTGTTGTTAATTATGGTGATGTGGTGGAGATTGTTCTCAACAACCACCATGACAACCTCCACCCGTGGCAT CTCCACGGTCATGATTTCCAGGTGCTGCAGCGTACCTACCCGTACGGTGGCTTCTTTGATGGCTACCGTAACGTT TCGGCGACTCCCATGCGCAGAGATACGCTCATGGTGGAGCCTCTGGGACATTTCGTGATTAGATTCCGTGCAATG AATCCTGATAAGTATTCCCTCGCTGCAGATTAG |
| Transcript | >Ani_SJS72_1|g9147.t1 ATGATCCGAACCCTCATCACGCTCGGCCTGTACGGGTTCGTCCAACAGGTATCGAGCAAAGATGTGTACCTGGAT TGGAATATAACTTGGGTGACTGCAGCACCGGATGGGTATGCGAGGCCTGTGATCGGCATCAATGGACACTGGCCT TGTCCTCAGATCGACGTCGATGTTGGCGATAACCTCATCGTCGACGTGTACAACGGGCTGGGTAACGAGTCCACC GGAATCCATTGGCATGGTCTCCATCAGAACTACAATGGGTACATGGACGGTGTCCCAGGAGTCACTCAATGCGAG CTCCACCCCAACCAGCGGATGCGCTACATTGTTCCGATCAACCAAACCGGCACATATTGGTACCACTCCCACGAG CCCGGTCAATATCCTGATGGGTTGCGCGGACCCATCATCGTGCACGATAATGTTCCTGCGCCGTATCACTATGAC GAGGAAATGACTCTCACTCTATCAGACTGGTATCATGTACAAATACCTGTCTTGCTCGATGAATTCATTGTTCCA TCGGACCATGCCCCCTATGGCGGTCAAGAGCCACTGCCTGATGCGGTTTTGTTCAATGACATGCATAACACCAAG ATCAGCGTCAAGCCCGGCACGACCTACCTGATCCACGTTGTTTGCATGGGAAACTTCCCCGGCCATGCACTCGTC ATTGACGACCACGACATGACCATTGTTGGTATGGATGGCATTGCAGTGGAACCGCATTTTCTTCCACCCCAGTAT CTGCGTGTGGCCGTTGGGCAACGAGTCGACATCCTCCTCACCACCAAAAACGATACTAGCAAGAACTATGCGATC TGGGACGGCCTCGATATTGACGAAATGTTTGTTCAAGAGGGAAGGAGCCCACCTCAAGGGTACAATCCCAACGGC ACCGCATGGCTCATGTACAATGAAGATGCTCCTTTGCCTCCTCCACCAGTGATTCATGTCAACAATGCAAGTCTG GACTTCCTCGACGATGTGACCTTGACACCGAGAGACCATCTTCCGTTGATCGACCCAATACAACACCAATTCATC TTCGATGTCTACCCAACCACAGTGGATGGAAAGCCCGCCTACAGCATCAACAATATGACATATAACGCTCCCGAC TCTCCCACGCTGTATACTGCCATTTATTCTGACCCTGAGGCTTGCATGGACCCGGACCTTTATGGGGATGTGAAC CCTTTTGTTGTTAATTATGGTGATGTGGTGGAGATTGTTCTCAACAACCACCATGACAACCTCCACCCGTGGCAT CTCCACGGTCATGATTTCCAGGTGCTGCAGCGTACCTACCCGTACGGTGGCTTCTTTGATGGCTACCGTAACGTT TCGGCGACTCCCATGCGCAGAGATACGCTCATGGTGGAGCCTCTGGGACATTTCGTGATTAGATTCCGTGCAATG AATCCTGATAAGTATTCCCTCGCTGCAGATTAG |
| Gene | >Ani_SJS72_1|g9147.t1 ATGATCCGAACCCTCATCACGCTCGGCCTGTACGGGTTCGTCCAACAGGTATCGAGCAAAGATGTGTACCTGGAT TGGAATATAACTTGGGTGACTGCAGCACCGGATGGGTATGCGAGGCCTGTGATCGGCATCAATGGACACTGGCCT TGTCCTCAGATCGACGTCGATGTTGGCGATAACCTCATCGTCGACGTGTACAACGGGCTGGGTAACGAGTCCACC GGAATCCATTGGCATGGTCTCCATCAGAACTACAATGGGTACATGGACGGTGTCCCAGGAGTCACTCAATGCGAG CTCCACCCCAACCAGCGGATGCGCTACATTGTTCCGGTAAGCTGACCCTGCTTGCTGGATCAGTACCTGAACTGC GCCTTCTGACCCATGGATCTAGATCAACCAAACCGGCACATATTGGTACCACTCCCACGAGCCCGGTCAATATCC TGATGGGTTGCGCGGACCCATCATCGTGCACGATAATGTTCCTGCGCCGTATCACTATGACGAGGAAATGACTCT CACTCTATCAGACTGGTATCATGTACAAATACCTGTCTTGCTCGATGAATTCATTGTTCCATCGGACCATGCCCC CTATGGCGGTCAAGAGCCACTGCCTGATGCGGTTTTGTTCAATGACATGCATAACACCAAGATCAGCGTCAAGCC CGGCACGACCTACCTGATCCACGTTGTTTGCATGGGAAACTTCCCCGGCCATGCACTCGTCATTGACGACCACGA CATGACCATTGTTGGTATGGATGGCATTGCAGTGGAACCGCATTTTCTTCCACCCCAGTATCTGCGTGTGGCCGT TGGGCAACGAGTCGACATCCTCCTCACCACCAAAAACGATACTAGCAAGAACTATGCGATCTGGGACGGCCTCGA TATTGACGAAATGTTTGTTCAAGAGGGAAGGAGCCCACCTCAAGGGTACAATCCCAACGGCACCGCATGGCTCAT GTACAATGAAGATGCTCCTTTGCCTCCTCCACCAGTGATTCATGTCAACAATGCAAGTCTGGACTTCCTCGACGA TGTGACCTTGACACCGAGAGACCATCTTCCGTTGATCGACCCAATACAACACCAATTCATCTTCGATGTCTACCC AACCACAGTGGATGGAAAGCCCGCCTACAGCATCAACAATATGACATATAACGCTCCCGACTCTCCCACGCTGTA TACTGCCATTTATTCTGACCCTGAGGCTTGCATGGACCCGGACCTTTATGGGGATGTGAACCCTTTTGTTGTTAA TTATGGTGATGTGGTGGAGATTGTTCTCAACAACCACCATGACAACCTCCACCCGTGGCATCTCCACGGTCATGA TTTCCAGGTGCTGCAGCGTACCTACCCGTACGGTGGCTTCTTTGATGGCTACCGTAACGTTTCGGCGACTCCCAT GCGCAGAGATACGCTCATGGTGGAGCCTCTGGGACATTTCGTGATTAGATTCCGTGCAATGAATCCTGATAAGTA TTCCCTCGCTGCAGATTAG |