© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g8953.t1 |
| Gene name | |
| Location | scaffold_089:115210..116790 |
| Strand | + |
| Gene length (bp) | 1580 |
| Transcript length (bp) | 1521 |
| Coding sequence length (bp) | 1521 |
| Protein length (aa) | 507 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00083 | Sugar_tr | Sugar (and other) transporter | 9.7E-92 | 14 | 469 |
| PF07690 | MFS_1 | Major Facilitator Superfamily | 7.4E-26 | 57 | 418 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0009987 | cellular process | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005215 | transporter activity | No |
| GO:0005575 | cellular_component | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0003674 | molecular_function | No |
| GO:0006810 | transport | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 32 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 5 | 24 | 19 |
| 2 | 58 | 80 | 22 |
| 3 | 92 | 114 | 22 |
| 4 | 118 | 137 | 19 |
| 5 | 150 | 172 | 22 |
| 6 | 182 | 204 | 22 |
| 7 | 272 | 294 | 22 |
| 8 | 309 | 331 | 22 |
| 9 | 338 | 356 | 18 |
| 10 | 371 | 393 | 22 |
| 11 | 406 | 428 | 22 |
| 12 | 432 | 454 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g8953.t1 MQGQALRYAQIFLVACPSFILFGYNQSGVGGLDDFPSWVRVFPEIDTVNTTGAQESHNATVQGAVVASYTIGALF GSLICTMIGDMLGRRRSIFSGALIALIGQILECTAYSLAQFVVGRVILGFGVGMLSATVPVWQSECAPAAQRGRN VVLTGMFIAFGFALTQWVNFGFYHMENSPASWRASLAIPALFSFIIMGSIFFLPESPRWLVMKNKSDVAQFTLAS LRGKEVDSLEVVAELRAYELSLEESSNNSLRLRDIFSMGEEKLLYRFILCVTLQFFQQMTGGTLISVYIPLIFQT DLGLGASLSKILAACALTWKFLCCFVGFAIIDRMGRRTAFMVSGGGMGMCMLALAVSNSFSNNHTASIISALFIF IYNFFLPIGFLGANFLYPAEVAPARLRVAMQAISIANQWLWMFVVAMITPVAIDNIGYRYYIVYAIIGGIIPPVI YLFYPETKGRSLEEVDEIFRDAPTIFAAVSMSKHKPMGDRAMERVMEEKATVEEIE* |
| Coding | >Ani_SJS72_1|g8953.t1 ATGCAGGGCCAAGCACTTCGTTATGCCCAGATCTTCTTAGTCGCTTGCCCCTCCTTTATCCTTTTCGGTTACAAT CAGTCCGGTGTCGGAGGACTCGATGACTTTCCCTCCTGGGTGAGAGTATTTCCAGAAATTGACACAGTCAACACT ACTGGAGCTCAGGAGTCTCACAATGCCACCGTTCAAGGAGCTGTGGTTGCGTCATACACTATCGGAGCCCTCTTC GGGTCTCTGATTTGTACAATGATCGGTGACATGCTTGGACGTCGCCGATCGATCTTTTCTGGAGCACTCATTGCA TTGATTGGCCAAATCCTGGAATGCACCGCCTACTCTCTAGCTCAATTCGTTGTTGGGAGAGTGATTCTGGGTTTC GGTGTTGGCATGCTCAGTGCGACTGTACCTGTCTGGCAATCCGAGTGCGCGCCTGCTGCTCAGCGAGGACGGAAC GTGGTGTTGACAGGCATGTTCATCGCCTTTGGTTTCGCTTTGACACAATGGGTGAACTTCGGTTTCTACCACATG GAGAACTCGCCTGCCTCGTGGAGGGCATCACTTGCCATCCCGGCCTTGTTTTCATTCATAATCATGGGCAGCATT TTCTTCCTCCCAGAGTCGCCGCGTTGGCTCGTCATGAAGAACAAATCAGACGTGGCACAATTTACTTTGGCATCT CTGAGGGGCAAAGAGGTAGACTCGCTGGAGGTTGTGGCGGAGCTAAGAGCCTACGAGCTTTCTCTGGAGGAATCC TCGAACAACTCACTTAGGCTCCGAGACATCTTCAGTATGGGAGAGGAGAAGCTCCTATACAGGTTCATCCTATGT GTCACCCTCCAATTCTTCCAGCAGATGACTGGTGGAACTCTGATCTCGGTCTACATTCCTCTTATCTTTCAAACA GATCTTGGACTCGGTGCCAGTCTGTCGAAAATCTTGGCAGCATGCGCATTGACTTGGAAGTTCCTGTGCTGCTTT GTGGGATTTGCCATCATTGACCGCATGGGACGACGCACAGCATTTATGGTCAGTGGCGGTGGTATGGGCATGTGC ATGTTGGCATTGGCGGTCTCCAATTCCTTCTCCAATAACCATACCGCATCTATTATTTCCGCCCTTTTCATTTTC ATTTACAACTTCTTCCTTCCGATCGGCTTCTTGGGAGCCAACTTCCTTTACCCAGCCGAGGTGGCGCCTGCCCGT CTTCGTGTCGCTATGCAAGCGATCTCGATTGCCAACCAATGGCTATGGATGTTTGTCGTCGCTATGATCACTCCC GTCGCTATCGACAACATCGGCTATCGCTACTACATTGTTTACGCCATCATCGGTGGCATCATCCCTCCCGTCATC TATCTATTCTACCCAGAAACAAAGGGCCGGTCCCTAGAAGAAGTTGACGAGATCTTCCGTGACGCTCCCACCATC TTCGCTGCGGTGTCGATGTCGAAGCACAAGCCCATGGGAGATAGGGCCATGGAGCGTGTCATGGAAGAGAAGGCA ACTGTGGAGGAAATAGAGTAA |
| Transcript | >Ani_SJS72_1|g8953.t1 ATGCAGGGCCAAGCACTTCGTTATGCCCAGATCTTCTTAGTCGCTTGCCCCTCCTTTATCCTTTTCGGTTACAAT CAGTCCGGTGTCGGAGGACTCGATGACTTTCCCTCCTGGGTGAGAGTATTTCCAGAAATTGACACAGTCAACACT ACTGGAGCTCAGGAGTCTCACAATGCCACCGTTCAAGGAGCTGTGGTTGCGTCATACACTATCGGAGCCCTCTTC GGGTCTCTGATTTGTACAATGATCGGTGACATGCTTGGACGTCGCCGATCGATCTTTTCTGGAGCACTCATTGCA TTGATTGGCCAAATCCTGGAATGCACCGCCTACTCTCTAGCTCAATTCGTTGTTGGGAGAGTGATTCTGGGTTTC GGTGTTGGCATGCTCAGTGCGACTGTACCTGTCTGGCAATCCGAGTGCGCGCCTGCTGCTCAGCGAGGACGGAAC GTGGTGTTGACAGGCATGTTCATCGCCTTTGGTTTCGCTTTGACACAATGGGTGAACTTCGGTTTCTACCACATG GAGAACTCGCCTGCCTCGTGGAGGGCATCACTTGCCATCCCGGCCTTGTTTTCATTCATAATCATGGGCAGCATT TTCTTCCTCCCAGAGTCGCCGCGTTGGCTCGTCATGAAGAACAAATCAGACGTGGCACAATTTACTTTGGCATCT CTGAGGGGCAAAGAGGTAGACTCGCTGGAGGTTGTGGCGGAGCTAAGAGCCTACGAGCTTTCTCTGGAGGAATCC TCGAACAACTCACTTAGGCTCCGAGACATCTTCAGTATGGGAGAGGAGAAGCTCCTATACAGGTTCATCCTATGT GTCACCCTCCAATTCTTCCAGCAGATGACTGGTGGAACTCTGATCTCGGTCTACATTCCTCTTATCTTTCAAACA GATCTTGGACTCGGTGCCAGTCTGTCGAAAATCTTGGCAGCATGCGCATTGACTTGGAAGTTCCTGTGCTGCTTT GTGGGATTTGCCATCATTGACCGCATGGGACGACGCACAGCATTTATGGTCAGTGGCGGTGGTATGGGCATGTGC ATGTTGGCATTGGCGGTCTCCAATTCCTTCTCCAATAACCATACCGCATCTATTATTTCCGCCCTTTTCATTTTC ATTTACAACTTCTTCCTTCCGATCGGCTTCTTGGGAGCCAACTTCCTTTACCCAGCCGAGGTGGCGCCTGCCCGT CTTCGTGTCGCTATGCAAGCGATCTCGATTGCCAACCAATGGCTATGGATGTTTGTCGTCGCTATGATCACTCCC GTCGCTATCGACAACATCGGCTATCGCTACTACATTGTTTACGCCATCATCGGTGGCATCATCCCTCCCGTCATC TATCTATTCTACCCAGAAACAAAGGGCCGGTCCCTAGAAGAAGTTGACGAGATCTTCCGTGACGCTCCCACCATC TTCGCTGCGGTGTCGATGTCGAAGCACAAGCCCATGGGAGATAGGGCCATGGAGCGTGTCATGGAAGAGAAGGCA ACTGTGGAGGAAATAGAGTAA |
| Gene | >Ani_SJS72_1|g8953.t1 ATGCAGGGCCAAGCACTTCGTTATGCCCAGATCTTCTTAGTCGCTTGCCCCTCCTTTATCCTTTTCGGTTACAAT CAGTCCGGTGTCGGAGGACTCGATGACTTTCCCTCCTGGGTGAGAGTATTTCCAGAAATTGACACAGTCAACACT ACTGGAGCTCAGGAGTCTCACAATGCCACCGTTCAAGGAGCTGTGGTTGCGTCATACACTATCGGAGCCCTCTTC GGGTCTCTGATTTGTACAATGATCGGTGACATGCTTGGACGTCGCCGATCGATCTTTTCTGGAGCACTCATTGCA TTGATTGGCCAAATCCTGGAATGCACCGCCTACTCTCTAGCTCAATTCGTTGTTGGGAGAGTGATTCTGGGTTTC GGTGTTGGCATGCTCAGTGCGACTGTACCTGTCTGGCAATCCGAGTGCGCGCCTGCTGCTCAGCGAGGACGGAAC GTGGTGTTGACAGGCATGTTCATCGCCTTTGGTTTCGCTTTGACACAATGGGTGAACTTCGGTTTCTACCACATG GAGAACTCGCCTGCCTCGTGGAGGGCATCACTTGCCATCCCGGCCTTGTTTTCATTCATAATCATGGGCAGCATT TTCTTCCTCCCAGAGTCGCCGCGTTGGCTCGTCATGAAGAACAAATCAGACGTGGCACAATTTACTTTGGCATCT CTGAGGGGCAAAGAGGTAGACTCGCTGGAGGTTGTGGCGGAGCTAAGAGCCTACGAGCTTTCTCTGGAGGAATCC TCGAACAACTCACTTAGGCTCCGAGACATCTTCAGTATGGGAGAGGAGAAGCTCCTATACAGGTTCATCCTATGT GTCACCCTCCAATTCTTCCAGCAGATGACTGGTGGAACTCTGATCTCGGTCTACATTCCTCTTATCTTTCAAACA GATCTTGGACTCGGTGCCAGTCTGTCGAAAATCTTGGCAGCATGCGCATTGACTTGGAAGTTCCTGTGCTGCTTT GTGGGATTTGCCATCATTGACCGCATGGGACGACGCACAGCATTTATGGTCAGTGGCGGTGGTATGGGCATGTGC ATGTTGGCATTGGCGGTCTCCAATTCCTTCTCCAATAACCATACCGCATCTATTATTTCCGCCCTTTTCATTTTC ATTTACAACTTCTTCCTTCCGATCGGCTTCTTGGGAGCCAACTTCCTTTACCCAGCCGAGGTGGCGCCTGCCCGT CTTCGTGTCGCTATGCAAGCGATCTCGATTGCCAACCAATGGCTATGGTACGACAGCCTCTATGATTTCCTCTTA GCTGACTTACGCTAATTACTTTCTCTTTTAGGATGTTTGTCGTCGCTATGATCACTCCCGTCGCTATCGACAACA TCGGCTATCGCTACTACATTGTTTACGCCATCATCGGTGGCATCATCCCTCCCGTCATCTATCTATTCTACCCAG AAACAAAGGGCCGGTCCCTAGAAGAAGTTGACGAGATCTTCCGTGACGCTCCCACCATCTTCGCTGCGGTGTCGA TGTCGAAGCACAAGCCCATGGGAGATAGGGCCATGGAGCGTGTCATGGAAGAGAAGGCAACTGTGGAGGAAATAG AGTAA |