© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS72_1|g8927.t1 |
| Gene name | |
| Location | scaffold_089:13272..15497 |
| Strand | - |
| Gene length (bp) | 2225 |
| Transcript length (bp) | 2058 |
| Coding sequence length (bp) | 2058 |
| Protein length (aa) | 686 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00955 | HCO3_cotransp | HCO3- transporter family | 5.5E-31 | 80 | 247 |
| PF00955 | HCO3_cotransp | HCO3- transporter family | 3.3E-37 | 254 | 514 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016021 | integral component of membrane | Yes |
| GO:0006820 | anion transport | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005575 | cellular_component | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0051179 | localization | No |
| GO:0006810 | transport | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0006811 | ion transport | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 15 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 99 | 121 | 22 |
| 2 | 141 | 163 | 22 |
| 3 | 183 | 205 | 22 |
| 4 | 218 | 240 | 22 |
| 5 | 250 | 272 | 22 |
| 6 | 285 | 307 | 22 |
| 7 | 344 | 363 | 19 |
| 8 | 383 | 405 | 22 |
| 9 | 454 | 476 | 22 |
| 10 | 536 | 558 | 22 |
| 11 | 562 | 579 | 17 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g8927.t1 MPLISAFRPRSTRSSSLRRRPRRQRRSPRRGDVQHNEEVNRDDDEEDEEDAHSIITPSKHTPKAIRVLRGPVSSG GPLRPFRLIKQDILNLRRRYVSDWTVFNQLIFASAVYVFFTNLLPGITFASDLYVLTGQNWGTIEVVFSTGLCGI IFSLFSIQPLTILGVTGPFSVLAENIYSLCEDVFKIPFLPFMAWSLIHSAWLHYVLAIVNAHDWTMRYVTTFATE IFSLLNSIIYFHKAIQELERAHESLSFAAFLYAIIGAVGTMLLAIFLSTAESWRPLFHRYIRMGLTEYAAAISII IFIGLPHVGELAHLDKMTLPVSTSFKPTSPSRDRFLVEFWHLPVSWVFAAILPGIIITVLFFFDHEVSSIICTID RYGTRKPGGFAWDIVLLGTTTALCGILGIPPANGLLPQAPLHSESLMHTEKEQRTITVDGEEKIETYEVKRVYEQ RWSAFLHSAVIFLFISPPFMKVLGLTPTSVLAGLFMFMGEQSLSVNPILYRTFYLLTPPSELPPLPPSLATQQPI TSEAEPPTPSYIPIHLYTILQIVITVAIFILTLTRGAPAFPVLIVLLVPFRLLLMKRWWPREVLRFVDAWACKEG TPEDDEDAEAKLCSEQSGGVFASHDQSGSDTAVTEDMRTSQRVELGGGDLADRRGDDETGNEWVELGVWSRADEE SGGRLQRRDN* |
| Coding | >Ani_SJS72_1|g8927.t1 ATGCCGTTAATATCTGCCTTTCGACCCCGTTCCACGCGGAGCTCCTCTCTCCGGCGGAGACCCCGTAGGCAGAGG AGGTCTCCGAGACGTGGCGATGTCCAACACAATGAGGAAGTTAATCGGGACGATGACGAGGAAGATGAAGAAGAT GCACATTCCATCATCACTCCATCGAAGCATACCCCCAAGGCAATTCGGGTGCTACGGGGCCCTGTGTCGTCAGGG GGCCCGTTACGGCCTTTTCGTCTGATAAAGCAGGACATACTGAACTTGCGCCGCAGATATGTATCCGACTGGACT GTCTTCAATCAATTGATTTTCGCTAGTGCAGTCTATGTCTTCTTTACGAATCTTTTGCCGGGCATTACCTTCGCC AGCGACCTCTATGTGCTCACTGGGCAGAACTGGGGAACTATCGAGGTCGTGTTTAGTACAGGCTTATGCGGCATC ATCTTTTCACTCTTCTCCATCCAGCCACTAACTATTCTTGGTGTTACTGGGCCTTTCTCAGTGCTGGCTGAGAAT ATATATTCGCTATGCGAGGATGTTTTCAAGATACCATTCTTACCGTTTATGGCCTGGTCTCTGATCCATTCGGCC TGGCTTCACTACGTCCTGGCTATAGTTAACGCTCACGACTGGACGATGCGTTATGTTACCACTTTTGCAACCGAG ATCTTCTCGCTTCTCAACAGCATTATCTACTTCCATAAAGCTATCCAAGAGCTCGAAAGAGCACACGAAAGTCTA TCATTTGCAGCGTTTCTCTACGCTATAATAGGAGCTGTGGGAACGATGCTGCTCGCAATCTTTCTATCCACGGCC GAGAGCTGGCGTCCTCTGTTCCATCGATACATCCGAATGGGCCTGACTGAGTATGCTGCTGCGATCTCCATCATC ATCTTCATCGGTCTTCCCCACGTTGGAGAACTAGCCCATCTGGATAAAATGACACTTCCCGTCAGCACCTCGTTC AAACCTACATCTCCTAGTCGTGATAGATTCCTCGTCGAATTCTGGCATCTCCCTGTATCTTGGGTGTTCGCTGCT ATCCTTCCCGGTATTATCATTACCGTGCTCTTTTTCTTCGATCATGAAGTTAGCTCGATCATCTGCACAATTGAT CGCTACGGCACCAGAAAACCAGGAGGCTTCGCTTGGGACATAGTCCTCCTAGGCACTACAACAGCATTGTGCGGC ATCCTAGGAATTCCTCCTGCCAACGGACTTCTTCCTCAAGCCCCTCTCCACTCGGAGTCTCTAATGCATACAGAA AAGGAGCAGCGCACAATTACAGTTGACGGAGAAGAAAAGATCGAAACATACGAGGTGAAGCGCGTTTACGAACAG CGCTGGTCAGCATTCCTCCACTCAGCCGTCATCTTCCTTTTCATCAGTCCACCATTCATGAAAGTGCTGGGATTG ACTCCAACAAGCGTCCTAGCAGGGCTATTCATGTTCATGGGCGAGCAGAGTTTATCAGTCAACCCAATCCTCTAC CGGACCTTCTACCTCTTAACTCCGCCTTCCGAGCTCCCTCCTCTCCCACCATCTCTTGCCACACAGCAACCGATT ACCTCCGAAGCGGAACCCCCAACACCATCATACATCCCCATCCACCTCTACACCATCCTCCAGATCGTCATAACC GTAGCCATCTTCATCCTAACCCTCACTCGTGGTGCACCCGCATTCCCCGTGCTCATCGTCTTATTAGTCCCCTTC CGTCTTCTCTTAATGAAGCGCTGGTGGCCCCGCGAGGTCCTGAGGTTCGTAGATGCATGGGCATGCAAAGAGGGG ACACCAGAGGATGACGAAGACGCTGAAGCGAAATTGTGCAGTGAGCAGTCGGGAGGGGTTTTTGCTTCGCACGAC CAGTCTGGTTCTGATACTGCTGTGACTGAGGATATGCGAACAAGCCAAAGGGTGGAATTAGGTGGGGGTGATCTC GCAGATAGGCGTGGCGATGACGAGACTGGGAATGAGTGGGTTGAGCTGGGGGTTTGGAGTCGTGCTGATGAAGAG TCGGGAGGTCGGTTACAACGCAGGGATAATTGA |
| Transcript | >Ani_SJS72_1|g8927.t1 ATGCCGTTAATATCTGCCTTTCGACCCCGTTCCACGCGGAGCTCCTCTCTCCGGCGGAGACCCCGTAGGCAGAGG AGGTCTCCGAGACGTGGCGATGTCCAACACAATGAGGAAGTTAATCGGGACGATGACGAGGAAGATGAAGAAGAT GCACATTCCATCATCACTCCATCGAAGCATACCCCCAAGGCAATTCGGGTGCTACGGGGCCCTGTGTCGTCAGGG GGCCCGTTACGGCCTTTTCGTCTGATAAAGCAGGACATACTGAACTTGCGCCGCAGATATGTATCCGACTGGACT GTCTTCAATCAATTGATTTTCGCTAGTGCAGTCTATGTCTTCTTTACGAATCTTTTGCCGGGCATTACCTTCGCC AGCGACCTCTATGTGCTCACTGGGCAGAACTGGGGAACTATCGAGGTCGTGTTTAGTACAGGCTTATGCGGCATC ATCTTTTCACTCTTCTCCATCCAGCCACTAACTATTCTTGGTGTTACTGGGCCTTTCTCAGTGCTGGCTGAGAAT ATATATTCGCTATGCGAGGATGTTTTCAAGATACCATTCTTACCGTTTATGGCCTGGTCTCTGATCCATTCGGCC TGGCTTCACTACGTCCTGGCTATAGTTAACGCTCACGACTGGACGATGCGTTATGTTACCACTTTTGCAACCGAG ATCTTCTCGCTTCTCAACAGCATTATCTACTTCCATAAAGCTATCCAAGAGCTCGAAAGAGCACACGAAAGTCTA TCATTTGCAGCGTTTCTCTACGCTATAATAGGAGCTGTGGGAACGATGCTGCTCGCAATCTTTCTATCCACGGCC GAGAGCTGGCGTCCTCTGTTCCATCGATACATCCGAATGGGCCTGACTGAGTATGCTGCTGCGATCTCCATCATC ATCTTCATCGGTCTTCCCCACGTTGGAGAACTAGCCCATCTGGATAAAATGACACTTCCCGTCAGCACCTCGTTC AAACCTACATCTCCTAGTCGTGATAGATTCCTCGTCGAATTCTGGCATCTCCCTGTATCTTGGGTGTTCGCTGCT ATCCTTCCCGGTATTATCATTACCGTGCTCTTTTTCTTCGATCATGAAGTTAGCTCGATCATCTGCACAATTGAT CGCTACGGCACCAGAAAACCAGGAGGCTTCGCTTGGGACATAGTCCTCCTAGGCACTACAACAGCATTGTGCGGC ATCCTAGGAATTCCTCCTGCCAACGGACTTCTTCCTCAAGCCCCTCTCCACTCGGAGTCTCTAATGCATACAGAA AAGGAGCAGCGCACAATTACAGTTGACGGAGAAGAAAAGATCGAAACATACGAGGTGAAGCGCGTTTACGAACAG CGCTGGTCAGCATTCCTCCACTCAGCCGTCATCTTCCTTTTCATCAGTCCACCATTCATGAAAGTGCTGGGATTG ACTCCAACAAGCGTCCTAGCAGGGCTATTCATGTTCATGGGCGAGCAGAGTTTATCAGTCAACCCAATCCTCTAC CGGACCTTCTACCTCTTAACTCCGCCTTCCGAGCTCCCTCCTCTCCCACCATCTCTTGCCACACAGCAACCGATT ACCTCCGAAGCGGAACCCCCAACACCATCATACATCCCCATCCACCTCTACACCATCCTCCAGATCGTCATAACC GTAGCCATCTTCATCCTAACCCTCACTCGTGGTGCACCCGCATTCCCCGTGCTCATCGTCTTATTAGTCCCCTTC CGTCTTCTCTTAATGAAGCGCTGGTGGCCCCGCGAGGTCCTGAGGTTCGTAGATGCATGGGCATGCAAAGAGGGG ACACCAGAGGATGACGAAGACGCTGAAGCGAAATTGTGCAGTGAGCAGTCGGGAGGGGTTTTTGCTTCGCACGAC CAGTCTGGTTCTGATACTGCTGTGACTGAGGATATGCGAACAAGCCAAAGGGTGGAATTAGGTGGGGGTGATCTC GCAGATAGGCGTGGCGATGACGAGACTGGGAATGAGTGGGTTGAGCTGGGGGTTTGGAGTCGTGCTGATGAAGAG TCGGGAGGTCGGTTACAACGCAGGGATAATTGA |
| Gene | >Ani_SJS72_1|g8927.t1 ATGCCGTTAATATCTGCCTTTCGACCCCGTTCCACGCGGAGCTCCTCTCTCCGGCGGAGACCCCGTAGGCAGAGG AGGTCTCCGAGACGTGGCGATGTCCAACACAATGAGGAAGTTAATCGGGACGATGACGAGGAAGATGAAGAAGAT GCACATTCCATCATCACTCCATCGAAGCATACCCCCAAGGCAATTCGGGTGCTACGGGGCCCTGTGTCGTCAGGG GGCCCGTTACGGCCTTTTCGTCTGATAAAGCAGGACATACTGAACTTGCGCCGCAGATATGTATCCGACTGGACT GTCTTCAATCAATTGATTTTCGCTAGTGCAGTCTATGTCTTCTTTACGAATCTTTTGCCGGGCATTACCTTCGCC AGCGACCTCTATGTGCTCACTGGGCAGAACTGGGGAACTATCGAGGTCGTGTTTAGTACAGGCTTATGCGGCATC ATCTTTTCACTGTAGGCCTGTCTGCACTAGGAATCGAGCAACATAGACTGACAACATCCCCCAGCTTCTCCATCC AGCCACTAACTATTCTTGGTGTTACTGGGCCTTTCTCAGTGCTGGCTGAGAATATATATTCGCTATGCGAGGATG TTTTCAAGGTGATTTCTCGGGAAGAAAAAAAAGAGGTTCTAGCAGTGGCTTACGATTATCCCATAGATACCATTC TTACCGTTTATGGCCTGGTCTCTGATCCATTCGGCCTGGCTTCACTACGTCCTGGCTATAGTTAACGCTCACGAC TGGACGATGCGTTATGTTACCACTTTTGCAACCGAGATCTTCTCGCTTCTCAACAGCATTATCTACTTCCATAAA GCTATCCAAGAGCTCGAAAGAGCACACGAAAGTCTATCATTTGCAGCGTTTCTCTACGCTATAATAGGAGCTGTG GGAACGATGCTGCTCGCAATCTTTCTATCCACGGCCGAGAGCTGGCGTCCTCTGTTCCATCGATACATCCGAATG GGCCTGACTGAGTATGCTGCTGCGATCTCCATCATCATCTTCATCGGTCTTCCCCACGTTGGAGAACTAGCCCAT CTGGATAAAATGACACTTCCCGTCAGCACCTCGTTCAAACCTACATCTCCTAGTCGTGATAGATTCCTCGTCGAA TTCTGGCATCTCCCTGTATCTTGGGTGTTCGCTGCTATCCTTCCCGGTATTATCATTACCGTGCTCTTTTTCTTC GATCATGAAGTTAGCTCGATCATCTGCACAATTGATCGCTACGGCACCAGAAAACCAGGAGGCTTCGCTTGGGAC ATAGTCCTCCTAGGCACTACAACAGCATTGTGCGGCATCCTAGGAATTCCTCCTGCCAACGGACTTCTTCCTCAA GCCCCTCTCCACTCGGAGTCTCTAATGCATACAGAAAAGGAGCAGCGCACAATTACAGTTGACGGAGAAGAAAAG ATCGAAACATACGAGGTGAAGCGCGTTTACGAACAGCGCTGGTCAGCATTCCTCCACTCAGCCGTCATCTTCCTT TTCATCAGTCCACCATTCATGAAAGTGCTGGGATTGACTCCAACAAGCGTCCTAGCAGGGCTATTCATGTTCATG GGCGAGCAGAGTTTATCAGTCAAGTAAGCCGTCATAATCCGCATCAAACCAACAAACGAAACCCAACTAACAGCA CCAGCCCAATCCTCTACCGGACCTTCTACCTCTTAACTCCGCCTTCCGAGCTCCCTCCTCTCCCACCATCTCTTG CCACACAGCAACCGATTACCTCCGAAGCGGAACCCCCAACACCATCATACATCCCCATCCACCTCTACACCATCC TCCAGATCGTCATAACCGTAGCCATCTTCATCCTAACCCTCACTCGTGGTGCACCCGCATTCCCCGTGCTCATCG TCTTATTAGTCCCCTTCCGTCTTCTCTTAATGAAGCGCTGGTGGCCCCGCGAGGTCCTGAGGTTCGTAGATGCAT GGGCATGCAAAGAGGGGACACCAGAGGATGACGAAGACGCTGAAGCGAAATTGTGCAGTGAGCAGTCGGGAGGGG TTTTTGCTTCGCACGACCAGTCTGGTTCTGATACTGCTGTGACTGAGGATATGCGAACAAGCCAAAGGGTGGAAT TAGGTGGGGGTGATCTCGCAGATAGGCGTGGCGATGACGAGACTGGGAATGAGTGGGTTGAGCTGGGGGTTTGGA GTCGTGCTGATGAAGAGTCGGGAGGTCGGTTACAACGCAGGGATAATTGA |