Protein ID | Ani_SJS72_1|g8919.t1 |
Gene name | |
Location | scaffold_088:120297..121741 |
Strand | + |
Gene length (bp) | 1444 |
Transcript length (bp) | 1329 |
Coding sequence length (bp) | 1329 |
Protein length (aa) | 443 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF12756 | zf-C2H2_2 | C2H2 type zinc-finger (2 copies) | 5.2E-04 | 69 | 106 |
PF12756 | zf-C2H2_2 | C2H2 type zinc-finger (2 copies) | 3.1E-32 | 170 | 266 |
PF12171 | zf-C2H2_jaz | Zinc-finger double-stranded RNA-binding | 6.9E-09 | 77 | 100 |
PF12874 | zf-met | Zinc-finger of C2H2 type | 5.1E-07 | 76 | 99 |
Transcription Factor Class (based on PFAM domains) |
---|
C2H2 zinc finger |
Orthofinder run ID | 3 |
Orthogroup | 2921 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS72_1|g8919.t1 MDASASSLPYTCNTCLVAFRGSDAQRGHMRTDWHLYNMKRRIASLPPVSQETFNEKVLVAKATTTAAAAKASFET TCVACQKTFYSENSYQNHIKSSKHKAREARMSRDNADESSSVMSSTFSLGEPINKPRVGESEVNKVAETLKDATI KEESNEDEEMSDDGFFASRCLFCLQKSANVEENTEHMFKTHGMFIPEKDYLVDLEGLLRYLWRKINENSECLYCH MIRNTPEGIRTHMKDKGHCMIAFESEAEQIEIGQYYDFRSTYTDDEEWESTGSETHEEGGVKVDGEDEGWETDAS SMDEDEDDLDNRKRAPVVYATDYELHLPSGRSVGHRSLAKYYRQNLHNYPTAEERAERQLAIENGEIEEEEPKPR GRNLNRALITRANGGTGMIGVTDSQKKEVMITERKERQRAMRQEQRFTARVNRQANHQKHFRDPLLQ* |
Coding | >Ani_SJS72_1|g8919.t1 ATGGACGCCTCCGCCTCTTCTCTCCCCTACACCTGCAACACTTGCCTTGTTGCTTTCCGCGGCAGCGATGCACAG CGGGGGCACATGCGCACCGACTGGCACTTGTATAACATGAAGCGTCGGATTGCCTCTCTTCCCCCCGTGTCCCAG GAAACCTTCAACGAAAAGGTCCTCGTTGCCAAAGCCACCACCACTGCCGCGGCCGCCAAGGCATCGTTCGAGACG ACCTGTGTCGCTTGCCAGAAGACCTTCTACAGCGAGAACTCCTACCAGAACCATATCAAGAGCTCCAAGCACAAG GCTCGCGAGGCCCGCATGAGCCGAGACAATGCCGACGAGTCGTCCTCCGTCATGAGCTCCACTTTCTCCCTGGGA GAACCCATCAACAAGCCCCGCGTCGGAGAGTCCGAGGTCAACAAGGTCGCCGAGACCCTCAAGGATGCTACCATC AAGGAGGAGAGCAATGAAGACGAGGAGATGTCTGATGATGGATTCTTTGCGTCTCGTTGTCTTTTCTGTCTGCAG AAGTCAGCCAATGTTGAAGAGAACACCGAGCACATGTTCAAGACTCACGGCATGTTCATCCCCGAGAAGGACTAC CTCGTTGACCTTGAGGGTCTTCTCCGCTACCTGTGGCGCAAGATCAACGAAAACAGCGAATGTCTCTACTGCCAT ATGATCCGGAACACCCCCGAAGGCATCCGCACCCACATGAAGGACAAGGGCCACTGCATGATCGCATTCGAGTCC GAGGCCGAGCAGATCGAGATCGGCCAGTACTACGACTTCCGCAGCACCTACACAGATGACGAAGAGTGGGAGTCC ACCGGCAGCGAGACACATGAGGAAGGAGGCGTCAAGGTTGACGGCGAAGACGAGGGATGGGAGACAGACGCCTCA TCCATGGACGAGGATGAGGACGACCTCGACAACCGCAAGCGCGCGCCTGTCGTCTACGCCACCGACTACGAGCTG CATCTTCCCTCCGGTCGCAGCGTCGGCCACCGCTCCCTCGCCAAATACTACCGCCAGAACCTGCACAACTACCCC ACCGCAGAGGAACGTGCCGAGCGCCAACTTGCCATCGAGAACGGCGAGATTGAGGAAGAGGAGCCGAAGCCTCGT GGCCGCAACCTCAACCGTGCGCTTATCACCCGTGCCAATGGCGGTACTGGTATGATTGGAGTGACGGACTCTCAG AAGAAGGAGGTGATGATCACCGAGCGCAAGGAGCGCCAGAGAGCCATGCGGCAAGAGCAGCGCTTCACGGCACGG GTCAACCGGCAAGCCAACCACCAGAAACACTTCAGAGATCCTCTCCTGCAATGA |
Transcript | >Ani_SJS72_1|g8919.t1 ATGGACGCCTCCGCCTCTTCTCTCCCCTACACCTGCAACACTTGCCTTGTTGCTTTCCGCGGCAGCGATGCACAG CGGGGGCACATGCGCACCGACTGGCACTTGTATAACATGAAGCGTCGGATTGCCTCTCTTCCCCCCGTGTCCCAG GAAACCTTCAACGAAAAGGTCCTCGTTGCCAAAGCCACCACCACTGCCGCGGCCGCCAAGGCATCGTTCGAGACG ACCTGTGTCGCTTGCCAGAAGACCTTCTACAGCGAGAACTCCTACCAGAACCATATCAAGAGCTCCAAGCACAAG GCTCGCGAGGCCCGCATGAGCCGAGACAATGCCGACGAGTCGTCCTCCGTCATGAGCTCCACTTTCTCCCTGGGA GAACCCATCAACAAGCCCCGCGTCGGAGAGTCCGAGGTCAACAAGGTCGCCGAGACCCTCAAGGATGCTACCATC AAGGAGGAGAGCAATGAAGACGAGGAGATGTCTGATGATGGATTCTTTGCGTCTCGTTGTCTTTTCTGTCTGCAG AAGTCAGCCAATGTTGAAGAGAACACCGAGCACATGTTCAAGACTCACGGCATGTTCATCCCCGAGAAGGACTAC CTCGTTGACCTTGAGGGTCTTCTCCGCTACCTGTGGCGCAAGATCAACGAAAACAGCGAATGTCTCTACTGCCAT ATGATCCGGAACACCCCCGAAGGCATCCGCACCCACATGAAGGACAAGGGCCACTGCATGATCGCATTCGAGTCC GAGGCCGAGCAGATCGAGATCGGCCAGTACTACGACTTCCGCAGCACCTACACAGATGACGAAGAGTGGGAGTCC ACCGGCAGCGAGACACATGAGGAAGGAGGCGTCAAGGTTGACGGCGAAGACGAGGGATGGGAGACAGACGCCTCA TCCATGGACGAGGATGAGGACGACCTCGACAACCGCAAGCGCGCGCCTGTCGTCTACGCCACCGACTACGAGCTG CATCTTCCCTCCGGTCGCAGCGTCGGCCACCGCTCCCTCGCCAAATACTACCGCCAGAACCTGCACAACTACCCC ACCGCAGAGGAACGTGCCGAGCGCCAACTTGCCATCGAGAACGGCGAGATTGAGGAAGAGGAGCCGAAGCCTCGT GGCCGCAACCTCAACCGTGCGCTTATCACCCGTGCCAATGGCGGTACTGGTATGATTGGAGTGACGGACTCTCAG AAGAAGGAGGTGATGATCACCGAGCGCAAGGAGCGCCAGAGAGCCATGCGGCAAGAGCAGCGCTTCACGGCACGG GTCAACCGGCAAGCCAACCACCAGAAACACTTCAGAGATCCTCTCCTGCAATGA |
Gene | >Ani_SJS72_1|g8919.t1 ATGGACGCCTCCGCCTCTTCTCTCCCCTACACCTGCAACACTTGCCTTGTTGCTTTCCGCGGCAGCGATGCACAG CGGGGGCACATGCGCACCGACTGGCAGTAAGTTTCTTCATATCACCGCTAGGTTAGCCTGCAGGAACTGATTCCG TCTGCACTAGCTTGTATAACATGAAGCGTCGGATTGCCTCTCTTCCCCCCGTGTCCCAGGAAACCTTCAACGAAA AGGTCCTCGTTGCCAAAGCCACCACCACTGCCGCGGCCGCCAAGGCATCGTTCGAGACGACCTGTGTCGCTTGCC AGAAGACCTTCTACAGCGAGAACTCCTACCAGAACCATATCAAGAGCTCCAAGCACAAGGCTCGCGAGGCCCGCA TGAGCCGAGACAATGCCGACGAGTCGTCCTCCGTCATGAGCTCCACTTTCTCCCTGGGAGAACCCATCAACAAGC CCCGCGTCGGAGAGTCCGAGGTCAACAAGGTCGCCGAGACCCTCAAGGATGCTACCATCAAGGAGGAGAGCAATG AAGACGAGGAGATGTCTGATGATGGATTCTTTGCGTCTCGTTGTCTTTTCTGTCTGCAGAAGTCAGCCAATGTTG AAGAGAACACCGAGCACATGTTCAAGACTCACGGCATGTTCATCCCCGAGAAGGACTACCTCGTTGACCTTGAGG GTCTTCTCCGCTACCTGTGGCGCAAGATCAACGAAAACAGCGAATGTCTCTACTGCCATATGATCCGGAACACCC CCGAAGGCATCCGCACCCACATGAAGGACAAGGGCCACTGCATGATCGCATTCGAGTCCGAGGCCGAGCAGATCG AGATCGGCCAGTACTACGACTTCCGCAGCACCTACACAGATGACGAAGAGTGGGAGTCCACCGGCAGCGAGACAC ATGAGGAAGGAGGCGTCAAGGTTGACGGCGAAGACGAGGGATGGGAGACAGACGCCTCATCCATGGACGAGGATG AGGACGACCTCGACAACCGCAAGCGCGCGCCTGTCGTCTACGCCACCGACTACGAGCTGCATCTTCCCTCCGGTC GCAGCGTCGGCCACCGCTCCCTCGCCAAATACTACCGCCAGAACCTGCACAACTACCCCACCGCAGAGGAACGTG CCGAGCGCCAACTTGCCATCGAGAACGGCGAGATTGAGGAAGAGGAGCCGAAGCCTCGTGGCCGCAACCTCAACC GTGCGCTTATCACCCGTGCCAATGGCGGTACTGGTATGATTGGAGTGACGGACTCTCAGAAGAAGGAGGTGATGA TCACCGAGCGCAAGGAGCGCCAGAGAGCCATGCGGCAAGAGCAGCGCTTCACGGCACGGGTCAACCGGCAAGCCA ACCACCAGAAACACTTCAGAGTAAGTTTACCGCCCGAGGTTGTTCTAAATTTCATGATACTAATCAGATGGTATA GGATCCTCTCCTGCAATGA |