© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS72_1|g8869.t1 |
| Gene name | |
| Location | scaffold_087:83483..84880 |
| Strand | + |
| Gene length (bp) | 1397 |
| Transcript length (bp) | 1050 |
| Coding sequence length (bp) | 1050 |
| Protein length (aa) | 350 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13649 | Methyltransf_25 | Methyltransferase domain | 8.3E-13 | 68 | 165 |
| PF06325 | PrmA | Ribosomal protein L11 methyltransferase (PrmA) | 1.4E-11 | 63 | 137 |
| PF13847 | Methyltransf_31 | Methyltransferase domain | 6.2E-11 | 64 | 166 |
| PF08241 | Methyltransf_11 | Methyltransferase domain | 1.3E-08 | 69 | 168 |
| PF13489 | Methyltransf_23 | Methyltransferase domain | 2.6E-06 | 63 | 113 |
| PF05175 | MTS | Methyltransferase small domain | 2.1E-05 | 64 | 137 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0008168 | methyltransferase activity | Yes |
| GO:0003824 | catalytic activity | No |
| GO:0016741 | transferase activity, transferring one-carbon groups | No |
| GO:0003674 | molecular_function | No |
| GO:0016740 | transferase activity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 17 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g8869.t1 MAGEADSAAAMTSSSADRMVGMDHAEVRYFTSYDHHGIHEEMLKDDVRTRSYRDSIYQNRHIFKDKVVLDVGCGT GILSMFAAKAGAKHVIGVDMSSIIEKAREIVAVNGLSDKITLLQGKMEEVVLPYPKVDIIISEWMGYFLLYESML DTVLYARDRYLVPGGKIFPDKATMYLAAIEDGEYKDDKIGFWDNVYGFNYSPMKEIALTEPLVDTVEMKALVTDP CPIITLDLYTVTPADLVFKVPFSLPAKRSDFIHAVIAWFDIEFGACHKPITFSTGPHAKYTHWKQTVFYLRDVLT VEEEEVVSGVLENKPNDKNKRDLDISISYKFETTDPNRYSEGSCFYRMC* |
| Coding | >Ani_SJS72_1|g8869.t1 ATGGCCGGAGAAGCAGACTCTGCTGCTGCCATGACCAGCAGCAGTGCTGATCGCATGGTAGGCATGGACCACGCC GAAGTGCGTTATTTTACGAGTTATGATCACCACGGCATTCATGAGGAGATGCTTAAAGACGATGTTCGTACTAGA TCGTACCGTGACTCTATCTACCAGAACCGTCACATCTTCAAGGACAAGGTTGTTCTCGATGTCGGTTGCGGAACT GGTATTCTCAGCATGTTCGCCGCCAAGGCAGGTGCCAAGCATGTGATTGGTGTCGATATGTCGTCGATCATTGAG AAGGCTCGTGAGATTGTTGCTGTGAATGGCTTGTCGGACAAGATCACCCTGCTCCAAGGAAAGATGGAGGAGGTT GTCCTCCCTTACCCCAAGGTTGATATCATCATCTCCGAGTGGATGGGCTACTTCCTTCTCTATGAGAGCATGTTG GACACCGTTCTTTACGCCCGCGACCGTTACCTTGTTCCTGGTGGCAAGATCTTCCCCGACAAGGCCACCATGTAC TTGGCTGCCATCGAGGATGGCGAGTACAAGGATGACAAGATCGGATTCTGGGACAATGTGTATGGATTCAACTAC AGCCCGATGAAGGAGATTGCCCTTACCGAGCCCCTTGTCGATACTGTCGAGATGAAAGCGCTTGTTACAGACCCT TGCCCCATCATCACGCTTGATCTTTACACTGTTACTCCGGCCGACTTGGTCTTCAAGGTTCCATTTTCTCTTCCT GCCAAGCGCAGTGACTTCATCCACGCGGTGATCGCTTGGTTCGATATTGAATTCGGCGCATGCCACAAGCCCATC ACCTTCTCCACCGGTCCCCATGCCAAATACACCCACTGGAAGCAGACCGTCTTTTATCTTCGCGATGTTTTGACC GTCGAAGAGGAGGAAGTTGTTTCCGGTGTTCTCGAGAACAAGCCGAACGACAAGAACAAGCGCGACCTTGACATC AGCATCTCCTACAAGTTTGAGACCACGGATCCGAACCGTTACTCTGAGGGCAGCTGCTTCTACAGGATGTGCTAA |
| Transcript | >Ani_SJS72_1|g8869.t1 ATGGCCGGAGAAGCAGACTCTGCTGCTGCCATGACCAGCAGCAGTGCTGATCGCATGGTAGGCATGGACCACGCC GAAGTGCGTTATTTTACGAGTTATGATCACCACGGCATTCATGAGGAGATGCTTAAAGACGATGTTCGTACTAGA TCGTACCGTGACTCTATCTACCAGAACCGTCACATCTTCAAGGACAAGGTTGTTCTCGATGTCGGTTGCGGAACT GGTATTCTCAGCATGTTCGCCGCCAAGGCAGGTGCCAAGCATGTGATTGGTGTCGATATGTCGTCGATCATTGAG AAGGCTCGTGAGATTGTTGCTGTGAATGGCTTGTCGGACAAGATCACCCTGCTCCAAGGAAAGATGGAGGAGGTT GTCCTCCCTTACCCCAAGGTTGATATCATCATCTCCGAGTGGATGGGCTACTTCCTTCTCTATGAGAGCATGTTG GACACCGTTCTTTACGCCCGCGACCGTTACCTTGTTCCTGGTGGCAAGATCTTCCCCGACAAGGCCACCATGTAC TTGGCTGCCATCGAGGATGGCGAGTACAAGGATGACAAGATCGGATTCTGGGACAATGTGTATGGATTCAACTAC AGCCCGATGAAGGAGATTGCCCTTACCGAGCCCCTTGTCGATACTGTCGAGATGAAAGCGCTTGTTACAGACCCT TGCCCCATCATCACGCTTGATCTTTACACTGTTACTCCGGCCGACTTGGTCTTCAAGGTTCCATTTTCTCTTCCT GCCAAGCGCAGTGACTTCATCCACGCGGTGATCGCTTGGTTCGATATTGAATTCGGCGCATGCCACAAGCCCATC ACCTTCTCCACCGGTCCCCATGCCAAATACACCCACTGGAAGCAGACCGTCTTTTATCTTCGCGATGTTTTGACC GTCGAAGAGGAGGAAGTTGTTTCCGGTGTTCTCGAGAACAAGCCGAACGACAAGAACAAGCGCGACCTTGACATC AGCATCTCCTACAAGTTTGAGACCACGGATCCGAACCGTTACTCTGAGGGCAGCTGCTTCTACAGGATGTGCTAA |
| Gene | >Ani_SJS72_1|g8869.t1 ATGGCCGGAGAAGCAGACTCTGCTGCTGCCATGACCAGCAGCAGTGCTGATCGCATGGTAGGCATGGACCACGCC GAAGTGCGTTATTTTACGAGGTATGGCCAAGATAAGAAGTCTCCTTCGCATCATTCATGCTGACCAAAATCACAG TTATGATCACCACGGTAAATACTATCAATGACCTAAGAAATCTAGTCGGATGTGGCTAATCTCGGACCCCGCTCA GGCATTCATGAGGAGATGCTTGTAAGTGCGGTCCTTCCACAACACCTCGAGTATCGCTAACCACAAACGGTTTTT TAGAAAGACGATGTTCGTACTAGATCGTACCGTGACTCTATCTACCAGAACCGTCACATCTTCAAGGACAAGGTT GTTCTCGATGTCGGTTGCGGAACTGGTATTCTCAGCATGTATGTGTTCAAGCCGATCGACTGGTCAACAATGGGA TATCTAACACATTCGGTCTGAAAGGTTCGCCGCCAAGGCAGGTGCCAAGCATGTGATTGGTGTCGATATGTCGTC GATCATTGAGAAGGCTCGTGAGATTGTTGCTGTGAATGGCTTGTCGGACAAGATCACCCTGCTCCAAGGAAAGAT GGAGGAGGTTGTCCTCCCTTACCCCAAGGTTGATATCATCATCTCCGAGTGGATGGGCTACTTCCTTCTCTATGA GAGCATGTTGGACACCGTTCTTTACGCCCGCGACCGTTACCTTGTTCCTGGTGGCAAGATCTTCCCCGACAAGGC CACCATGTACTTGGCTGCCATCGAGGATGGCGAGTACAAGGATGACAAGATCGGATGTAAGCACACTTTCCTTGA CGCCACTATTCTTGATTGAAGCTGAGACGCTAACGGATCTTAGTCTGGGACAATGTGTATGGATTCAACTACAGC CCGATGAAGGAGATTGCCCTTACCGAGCCCCTTGTCGATACTGTCGAGATGAAAGCGCTTGTTACAGACCCTTGC CCCATCATCACGCTTGATCTTTACACTGTTACTCCGGCCGACTTGGTCTTCAAGGTTCCATTTTCTCTTCCTGCC AAGCGCAGTGACTTCATCCACGCGGTGATCGCTTGGTTCGATATTGAATTCGGCGCATGCCACAAGCCCATCACC TTCTCCACCGGTCCCCATGCCAAATACACCCACTGGAAGCAGACCGTCTTTTATCTTCGCGATGTTTTGACCGTC GAAGAGGAGGAAGTTGTTTCCGGTGTTCTCGAGAACAAGCCGAACGACAAGAACAAGCGCGACCTTGACATCAGC ATCTCCTACAAGTTTGAGACCACGGATCCGAACCGTTACTCTGAGGGCAGCTGCTTCTACAGGATGTGAGTACCC GTTTCTGACAGTATAAGATATCGTGTGCTAACCCTTGAAGGTGCTAA |